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Spg010862 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg010862
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein transport protein Sec61 subunit alpha-like
Genome locationscaffold10:6866694..6871616
RNA-Seq ExpressionSpg010862
SyntenySpg010862
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR002208 - SecY/SEC61-alpha family
IPR023201 - SecY domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8656389.1 Protein transport protein Sec61 subunit alpha isoform 2 [Hibiscus syriacus]7.1e-1351.02Show/hide
Query:  MRVILASNSGTVMELGITLIVTSKMVMKLLVGSRLLKST--IMCGR-----------------------TVLYCLDELLQKGYGLGSGVSLFIATNVC
        MRVILASN GTVMELGIT IVTS +VM+LL GS+++++   ++ G                         ++ CLDELLQKGYGLGSG+SLF+ATN+C
Subjt:  MRVILASNSGTVMELGITLIVTSKMVMKLLVGSRLLKST--IMCGR-----------------------TVLYCLDELLQKGYGLGSGVSLFIATNVC

KAE8659651.1 Protein transport protein Sec61 subunit alpha isoform 2 [Hibiscus syriacus]1.2e-1257.14Show/hide
Query:  MRVILASNSGTVMELGITLIVTSKMVMKLL-----------------VGSRLLKSTIMC-GRTVLYCLDELLQKGYGLGSGVSLFIATNVC
        MRVILASN GTVMELGIT IVTS +VM+LL                 VG+ +L    +C    ++ CLDELLQKGYGLGSG+SLFIATN+C
Subjt:  MRVILASNSGTVMELGITLIVTSKMVMKLL-----------------VGSRLLKSTIMC-GRTVLYCLDELLQKGYGLGSGVSLFIATNVC

KAG1341923.1 protein transport protein Sec61 subunit alpha [Cocos nucifera]9.2e-1353.61Show/hide
Query:  MRVILASNSGTVMELGITLIVTSKMVMKLLVGSRLLK------------STIMCGRTVL------------YCLDELLQKGYGLGSGVSLFIATNVC
        MRVILASN GTVMELGIT IVTS +VM+LL GS++++              ++ G  VL             CLDELLQKGYGLGS +SLFIATN+C
Subjt:  MRVILASNSGTVMELGITLIVTSKMVMKLLVGSRLLK------------STIMCGRTVL------------YCLDELLQKGYGLGSGVSLFIATNVC

OAF70692.1 hypothetical protein A3Q56_01539 [Intoshia linei]1.6e-1257.69Show/hide
Query:  MRVILASNSGTVMELGITLIVTSKMVMKLLVGSRLLKSTI-----MCGRTVLYCLDELLQKGYGLGSGVSLFIATNVC
        MRVILASN GT+MELGI+ IVTS +V++LL G++L++  +     +    ++  LDELLQ+GYG+GSG+SLFIATNVC
Subjt:  MRVILASNSGTVMELGITLIVTSKMVMKLLVGSRLLKSTI-----MCGRTVLYCLDELLQKGYGLGSGVSLFIATNVC

RWW21011.1 hypothetical protein GW17_00014847 [Ensete ventricosum]1.2e-1566.67Show/hide
Query:  MRVILASNSGTVMELGITLIVTSKMVMKLLVGSRLLK--STIMCGRTVLYCLDELLQKGYGLGSGVSLFIATNVC
        MRVILAS+ GTVMELGIT IVTS +VM+LLVGS++++  +++     ++ CLDELLQKGYGLGSG+SLFIATN+C
Subjt:  MRVILASNSGTVMELGITLIVTSKMVMKLLVGSRLLK--STIMCGRTVLYCLDELLQKGYGLGSGVSLFIATNVC

TrEMBL top hitse value%identityAlignment
A0A177BAL8 Plug_translocon domain-containing protein7.6e-1357.69Show/hide
Query:  MRVILASNSGTVMELGITLIVTSKMVMKLLVGSRLLKSTI-----MCGRTVLYCLDELLQKGYGLGSGVSLFIATNVC
        MRVILASN GT+MELGI+ IVTS +V++LL G++L++  +     +    ++  LDELLQ+GYG+GSG+SLFIATNVC
Subjt:  MRVILASNSGTVMELGITLIVTSKMVMKLLVGSRLLKSTI-----MCGRTVLYCLDELLQKGYGLGSGVSLFIATNVC

A0A1U7ZBD6 protein transport protein Sec61 subunit alpha-like1.0e-1250.96Show/hide
Query:  MRVILASNSGTVMELGITLIVTSKMVMKLLVGSRLLK-------------------STIMCGRTVL------------YCLDELLQKGYGLGSGVSLFIA
        MRVILASN GTVMELGIT IVTS +VM+LL GS++++                   S +  G  +L             CLDELLQKGYGLGSG+SLFIA
Subjt:  MRVILASNSGTVMELGITLIVTSKMVMKLLVGSRLLK-------------------STIMCGRTVL------------YCLDELLQKGYGLGSGVSLFIA

Query:  TNVC
        TN+C
Subjt:  TNVC

A0A444FEF4 Uncharacterized protein5.6e-1666.67Show/hide
Query:  MRVILASNSGTVMELGITLIVTSKMVMKLLVGSRLLK--STIMCGRTVLYCLDELLQKGYGLGSGVSLFIATNVC
        MRVILAS+ GTVMELGIT IVTS +VM+LLVGS++++  +++     ++ CLDELLQKGYGLGSG+SLFIATN+C
Subjt:  MRVILASNSGTVMELGITLIVTSKMVMKLLVGSRLLK--STIMCGRTVLYCLDELLQKGYGLGSGVSLFIATNVC

A0A6A2WL38 Protein transport protein Sec61 subunit alpha isoform 25.8e-1357.14Show/hide
Query:  MRVILASNSGTVMELGITLIVTSKMVMKLL-----------------VGSRLLKSTIMC-GRTVLYCLDELLQKGYGLGSGVSLFIATNVC
        MRVILASN GTVMELGIT IVTS +VM+LL                 VG+ +L    +C    ++ CLDELLQKGYGLGSG+SLFIATN+C
Subjt:  MRVILASNSGTVMELGITLIVTSKMVMKLL-----------------VGSRLLKSTIMC-GRTVLYCLDELLQKGYGLGSGVSLFIATNVC

A0A6A2XD84 Protein transport protein Sec61 subunit alpha isoform 23.4e-1351.02Show/hide
Query:  MRVILASNSGTVMELGITLIVTSKMVMKLLVGSRLLKST--IMCGR-----------------------TVLYCLDELLQKGYGLGSGVSLFIATNVC
        MRVILASN GTVMELGIT IVTS +VM+LL GS+++++   ++ G                         ++ CLDELLQKGYGLGSG+SLF+ATN+C
Subjt:  MRVILASNSGTVMELGITLIVTSKMVMKLLVGSRLLKST--IMCGR-----------------------TVLYCLDELLQKGYGLGSGVSLFIATNVC

SwissProt top hitse value%identityAlignment
P38377 Protein transport protein Sec61 subunit alpha isoform 13.1e-1138.71Show/hide
Query:  MRVILASNSGTVMELGITLIVTSKMVMKLLVGSRLLK-------------------STIMCGRTVLY--------------------------------C
        MRVILASN GT+MELGI+ IVTS ++M+LL G+++++                     I  G++++Y                                 
Subjt:  MRVILASNSGTVMELGITLIVTSKMVMKLLVGSRLLK-------------------STIMCGRTVLY--------------------------------C

Query:  LDELLQKGYGLGSGVSLFIATNVC
        LDELLQKGYGLGSG+SLFIATN+C
Subjt:  LDELLQKGYGLGSGVSLFIATNVC

P38379 Protein transport protein Sec61 subunit alpha8.1e-1242.4Show/hide
Query:  MRVILASNSGTVMELGITLIVTSKMVMKLLVGS--------------------RLLKSTIMCGRTVLY--------------------------------
        MRVILASN GT+MELGI+ IVTS +VM+LL GS                    +LL   I  G +V Y                                
Subjt:  MRVILASNSGTVMELGITLIVTSKMVMKLLVGS--------------------RLLKSTIMCGRTVLY--------------------------------

Query:  CLDELLQKGYGLGSGVSLFIATNVC
        CLDELLQKGYG+GS +SLFIATNVC
Subjt:  CLDELLQKGYGLGSGVSLFIATNVC

P61619 Protein transport protein Sec61 subunit alpha isoform 13.1e-1138.71Show/hide
Query:  MRVILASNSGTVMELGITLIVTSKMVMKLLVGSRLLK-------------------STIMCGRTVLY--------------------------------C
        MRVILASN GT+MELGI+ IVTS ++M+LL G+++++                     I  G++++Y                                 
Subjt:  MRVILASNSGTVMELGITLIVTSKMVMKLLVGSRLLK-------------------STIMCGRTVLY--------------------------------C

Query:  LDELLQKGYGLGSGVSLFIATNVC
        LDELLQKGYGLGSG+SLFIATN+C
Subjt:  LDELLQKGYGLGSGVSLFIATNVC

Q25147 Protein transport protein Sec61 subunit alpha1.1e-1140.32Show/hide
Query:  MRVILASNSGTVMELGITLIVTSKMVMKLLVGSRLLK-------------------STIMCGRTVLY--------------------------------C
        MRVI+ASN GT+MELGIT IVTS ++M+LL G++L++                     I  G+ V+Y                                 
Subjt:  MRVILASNSGTVMELGITLIVTSKMVMKLLVGSRLLK-------------------STIMCGRTVLY--------------------------------C

Query:  LDELLQKGYGLGSGVSLFIATNVC
        LDELLQKGYGLGSG+SLFIATN+C
Subjt:  LDELLQKGYGLGSGVSLFIATNVC

Q5EA68 Protein transport protein Sec61 subunit alpha isoform 16.2e-1239.52Show/hide
Query:  MRVILASNSGTVMELGITLIVTSKMVMKLLVGSRLLK-------------------STIMCGRTVLY--------------------------------C
        MRVILASN GT+MELGI+ IVTS ++M+LL G+++++                    TI  G++++Y                                 
Subjt:  MRVILASNSGTVMELGITLIVTSKMVMKLLVGSRLLK-------------------STIMCGRTVLY--------------------------------C

Query:  LDELLQKGYGLGSGVSLFIATNVC
        LDELLQKGYGLGSG+SLFIATN+C
Subjt:  LDELLQKGYGLGSGVSLFIATNVC

Arabidopsis top hitse value%identityAlignment
AT1G29310.1 SecY protein transport family protein2.3e-1444.8Show/hide
Query:  MRVILASNSGTVMELGITLIVTSKMVMKLLVGS--------------------RLLKSTIMCGRTVLY--------------------------------
        MRVILASN GTVMELGIT IVTS +VM+LL GS                    +LL   I  G  V Y                                
Subjt:  MRVILASNSGTVMELGITLIVTSKMVMKLLVGS--------------------RLLKSTIMCGRTVLY--------------------------------

Query:  CLDELLQKGYGLGSGVSLFIATNVC
        CLDELLQKGYGLGSG+SLFIATN+C
Subjt:  CLDELLQKGYGLGSGVSLFIATNVC

AT1G78720.1 SecY protein transport family protein3.1e-1444.8Show/hide
Query:  MRVILASNSGTVMELGITLIVTSKMVMKLLVGS--------------------RLLKSTIMCGRTVLY--------------------------------
        MRVILAS+ GTVMELGIT IVTS MVM+LL GS                    +LL   I  G+ V Y                                
Subjt:  MRVILASNSGTVMELGITLIVTSKMVMKLLVGS--------------------RLLKSTIMCGRTVLY--------------------------------

Query:  CLDELLQKGYGLGSGVSLFIATNVC
        CLDELLQKGYGLGSG+SLFIATN+C
Subjt:  CLDELLQKGYGLGSGVSLFIATNVC

AT2G34250.1 SecY protein transport family protein2.3e-1444.8Show/hide
Query:  MRVILASNSGTVMELGITLIVTSKMVMKLLVGS--------------------RLLKSTIMCGRTVLY--------------------------------
        MRVILASN GTVMELGIT IVTS +VM+LL GS                    +LL   I  G  V Y                                
Subjt:  MRVILASNSGTVMELGITLIVTSKMVMKLLVGS--------------------RLLKSTIMCGRTVLY--------------------------------

Query:  CLDELLQKGYGLGSGVSLFIATNVC
        CLDELLQKGYGLGSG+SLFIATN+C
Subjt:  CLDELLQKGYGLGSGVSLFIATNVC

AT2G34250.2 SecY protein transport family protein2.3e-1444.8Show/hide
Query:  MRVILASNSGTVMELGITLIVTSKMVMKLLVGS--------------------RLLKSTIMCGRTVLY--------------------------------
        MRVILASN GTVMELGIT IVTS +VM+LL GS                    +LL   I  G  V Y                                
Subjt:  MRVILASNSGTVMELGITLIVTSKMVMKLLVGS--------------------RLLKSTIMCGRTVLY--------------------------------

Query:  CLDELLQKGYGLGSGVSLFIATNVC
        CLDELLQKGYGLGSG+SLFIATN+C
Subjt:  CLDELLQKGYGLGSGVSLFIATNVC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAATCGGTTGGTTGAAGGAAGATGGGAGGTGGATTTCGAGTCCTTCATCTGGTCAGATGCGTGTGATTCTCGCTTCTAATAGTGGTACTGTCATGGAGCTTGGGAT
CACCCTCATTGTCACATCTAAGATGGTGATGAAACTCTTGGTTGGTTCAAGATTATTGAAGTCGACAATAATGTGTGGGAGGACCGTACTCTATTGCTTGGATGAACTTC
TCCAGAAAGGATATGGTTTAGGATCGGGAGTTTCCCTCTTCATAGCAACAAACGTGTGCCTGTTTTACAAAAGAAGTTTATCAAAATCCATAGCCAAAAGAGAAGTAATA
GAGAAATTGATGAGAGCAAGACTAAGGGATCCTAGTTTATCAAAATCCATAGCCAAAAGAGAAGTAATAGAGAAATTGGTGAGAGCAAGACTAAGGGATCCTTCGGCCTT
TTTGCAGATCATAAGTTTCTGTTCTTTTGGTTTTTTACATGAGATATGCGTTTTTGAAACTTCTTTGCCGATTGTGCCTACTGTTTACAAGGATGTGAAAGGAAATGATA
TTAAGTCAGATCAGGTTGAGTTGACCTTGAATGTTTCAACAGCAGAACAGTATGGAAATCACTCTCTTGAGCTTCAATCTGATTCACACTCTACTTATAGAGTGATCTCA
TGCAAGGAGAAACCTCAAGAAGCAAGACACATGTTGGAGATGCAAGCCATAGTGGATTCTAGGTGTTCATGTCACAATACTCGCAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGATAATCGGTTGGTTGAAGGAAGATGGGAGGTGGATTTCGAGTCCTTCATCTGGTCAGATGCGTGTGATTCTCGCTTCTAATAGTGGTACTGTCATGGAGCTTGGGAT
CACCCTCATTGTCACATCTAAGATGGTGATGAAACTCTTGGTTGGTTCAAGATTATTGAAGTCGACAATAATGTGTGGGAGGACCGTACTCTATTGCTTGGATGAACTTC
TCCAGAAAGGATATGGTTTAGGATCGGGAGTTTCCCTCTTCATAGCAACAAACGTGTGCCTGTTTTACAAAAGAAGTTTATCAAAATCCATAGCCAAAAGAGAAGTAATA
GAGAAATTGATGAGAGCAAGACTAAGGGATCCTAGTTTATCAAAATCCATAGCCAAAAGAGAAGTAATAGAGAAATTGGTGAGAGCAAGACTAAGGGATCCTTCGGCCTT
TTTGCAGATCATAAGTTTCTGTTCTTTTGGTTTTTTACATGAGATATGCGTTTTTGAAACTTCTTTGCCGATTGTGCCTACTGTTTACAAGGATGTGAAAGGAAATGATA
TTAAGTCAGATCAGGTTGAGTTGACCTTGAATGTTTCAACAGCAGAACAGTATGGAAATCACTCTCTTGAGCTTCAATCTGATTCACACTCTACTTATAGAGTGATCTCA
TGCAAGGAGAAACCTCAAGAAGCAAGACACATGTTGGAGATGCAAGCCATAGTGGATTCTAGGTGTTCATGTCACAATACTCGCAACTAG
Protein sequenceShow/hide protein sequence
MIIGWLKEDGRWISSPSSGQMRVILASNSGTVMELGITLIVTSKMVMKLLVGSRLLKSTIMCGRTVLYCLDELLQKGYGLGSGVSLFIATNVCLFYKRSLSKSIAKREVI
EKLMRARLRDPSLSKSIAKREVIEKLVRARLRDPSAFLQIISFCSFGFLHEICVFETSLPIVPTVYKDVKGNDIKSDQVELTLNVSTAEQYGNHSLELQSDSHSTYRVIS
CKEKPQEARHMLEMQAIVDSRCSCHNTRN