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Spg010884 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg010884
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionNBS-LRR type resistance protein
Genome locationscaffold10:9954682..9958727
RNA-Seq ExpressionSpg010884
SyntenySpg010884
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040420.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]3.1e-0465.96Show/hide
Query:  RPRGNRSSLQTRELAKAVEIELLVPDTLPTSAESSRSSSSYLLDAQF
        RPRGNR SLQT +L K VEIEL +PDTLPT AES  S+SS  L+  F
Subjt:  RPRGNRSSLQTRELAKAVEIELLVPDTLPTSAESSRSSSSYLLDAQF

KAA0052218.1 uncharacterized protein E6C27_scaffold207G00290 [Cucumis melo var. makuwa]4.7e-0567.39Show/hide
Query:  PRGNRSSLQTRELAKAVEIELLVPDTLPTSAESSRSSSSYLLDAQF
        PRGNR +L T +L K VEIEL VPDTLPTSAESS+S+SS  L+  F
Subjt:  PRGNRSSLQTRELAKAVEIELLVPDTLPTSAESSRSSSSYLLDAQF

KAA0062263.1 hypothetical protein E6C27_scaffold679G00320 [Cucumis melo var. makuwa]1.0e-0465.22Show/hide
Query:  PRGNRSSLQTRELAKAVEIELLVPDTLPTSAESSRSSSSYLLDAQF
        PRGNR SLQ  +L K VEIEL +PDTLPTS+ESS+S+SS  L+  F
Subjt:  PRGNRSSLQTRELAKAVEIELLVPDTLPTSAESSRSSSSYLLDAQF

KAA0066795.1 uncharacterized protein E6C27_scaffold271G001440 [Cucumis melo var. makuwa]3.1e-0471.74Show/hide
Query:  PRGNRSSLQTRELAKAVEIELLVPDTLPTSAESSRSSSSYLLDAQF
        PRGNR SLQTREL K   IEL VPDTLPTSAESS S+SS  L+  F
Subjt:  PRGNRSSLQTRELAKAVEIELLVPDTLPTSAESSRSSSSYLLDAQF

TYJ96965.1 uncharacterized protein E5676_scaffold506G00070 [Cucumis melo var. makuwa]8.0e-0569.57Show/hide
Query:  PRGNRSSLQTRELAKAVEIELLVPDTLPTSAESSRSSSSYLLDAQF
        PRGNR S QT +L K VEIEL VPDTLPTSAESS S+SS  L+  F
Subjt:  PRGNRSSLQTRELAKAVEIELLVPDTLPTSAESSRSSSSYLLDAQF

TrEMBL top hitse value%identityAlignment
A0A5A7TAS6 NBS-LRR type resistance protein1.5e-0465.96Show/hide
Query:  RPRGNRSSLQTRELAKAVEIELLVPDTLPTSAESSRSSSSYLLDAQF
        RPRGNR SLQT +L K VEIEL +PDTLPT AES  S+SS  L+  F
Subjt:  RPRGNRSSLQTRELAKAVEIELLVPDTLPTSAESSRSSSSYLLDAQF

A0A5A7UAH6 CCHC-type domain-containing protein2.3e-0567.39Show/hide
Query:  PRGNRSSLQTRELAKAVEIELLVPDTLPTSAESSRSSSSYLLDAQF
        PRGNR +L T +L K VEIEL VPDTLPTSAESS+S+SS  L+  F
Subjt:  PRGNRSSLQTRELAKAVEIELLVPDTLPTSAESSRSSSSYLLDAQF

A0A5A7V2F2 Uncharacterized protein5.1e-0565.22Show/hide
Query:  PRGNRSSLQTRELAKAVEIELLVPDTLPTSAESSRSSSSYLLDAQF
        PRGNR SLQ  +L K VEIEL +PDTLPTS+ESS+S+SS  L+  F
Subjt:  PRGNRSSLQTRELAKAVEIELLVPDTLPTSAESSRSSSSYLLDAQF

A0A5D3BET3 Uncharacterized protein3.9e-0569.57Show/hide
Query:  PRGNRSSLQTRELAKAVEIELLVPDTLPTSAESSRSSSSYLLDAQF
        PRGNR S QT +L K VEIEL VPDTLPTSAESS S+SS  L+  F
Subjt:  PRGNRSSLQTRELAKAVEIELLVPDTLPTSAESSRSSSSYLLDAQF

A0A5D3DWP3 Uncharacterized protein1.5e-0471.74Show/hide
Query:  PRGNRSSLQTRELAKAVEIELLVPDTLPTSAESSRSSSSYLLDAQF
        PRGNR SLQTREL K   IEL VPDTLPTSAESS S+SS  L+  F
Subjt:  PRGNRSSLQTRELAKAVEIELLVPDTLPTSAESSRSSSSYLLDAQF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCCAAGAGGAAATAGGTCGAGTCTACAGACCAGGGAACTAGCCAAAGCTGTAGAGATCGAGCTCCTGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAG
ATCGAGTTCCAGTTATCTTCTTGATGCGCAATTTGCATACCGCAAGTGTACGGGTCAAGAGTTCACGGTGTTCCGAATCCTACGATCAGGCCCTCCGAAGGGATGGTTGC
GCCAGGACAACACGCAGGCGGACCATAGGGCTCTCACGGTGCGAACTAAGGGCAGAGATCAAGGGATACGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGCCAAGAGGAAATAGGTCGAGTCTACAGACCAGGGAACTAGCCAAAGCTGTAGAGATCGAGCTCCTGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAG
ATCGAGTTCCAGTTATCTTCTTGATGCGCAATTTGCATACCGCAAGTGTACGGGTCAAGAGTTCACGGTGTTCCGAATCCTACGATCAGGCCCTCCGAAGGGATGGTTGC
GCCAGGACAACACGCAGGCGGACCATAGGGCTCTCACGGTGCGAACTAAGGGCAGAGATCAAGGGATACGTTGA
Protein sequenceShow/hide protein sequence
MRPRGNRSSLQTRELAKAVEIELLVPDTLPTSAESSRSSSSYLLDAQFAYRKCTGQEFTVFRILRSGPPKGWLRQDNTQADHRALTVRTKGRDQGIR