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Spg010913 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg010913
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotransposon protein
Genome locationscaffold10:6875502..6886060
RNA-Seq ExpressionSpg010913
SyntenySpg010913
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067273.1 retrotransposon protein [Cucumis melo var. makuwa]2.2e-3648.02Show/hide
Query:  WFEGHPAARGLRNKPFPYFDDLAIVFGKDKANGKGASTPNEMATDL-----DDDVNTDVEDCYVPSPPIVESVVGEEFYTTRSSRIDTPGSSQGSKRRCT
        W +GHP ARGL NK FPYF DL I+FG+D+A G    TP EM   +     +DD++ ++ED  +P+P  +E   GE+  +T +S     GSS+ SK+R +
Subjt:  WFEGHPAARGLRNKPFPYFDDLAIVFGKDKANGKGASTPNEMATDL-----DDDVNTDVEDCYVPSPPIVESVVGEEFYTTRSSRIDTPGSSQGSKRRCT

Query:  VPADAVDTFCTEMRYVSTQIEKIALWPQHKDEIESARRKQLYGELQSIPGMDMDDCLLVAETLLADDKKFRSFLDYP
           D +DTF   MR  S +I KIA W + K EIES+  K+LY ELQ+IPGMD+DDCL+V E+LL D     +FLDYP
Subjt:  VPADAVDTFCTEMRYVSTQIEKIALWPQHKDEIESARRKQLYGELQSIPGMDMDDCLLVAETLLADDKKFRSFLDYP

TYK07921.1 hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa]2.4e-3848.88Show/hide
Query:  WFEGHPAARGLRNKPFPYFDDLAIVFGKDKANGKGASTPNEMATDL-----DDDVNTDVEDCYVPSPPIVESVVGEEFYTTRSSRIDTPGSSQGSKRRCT
        W +GHP A+GL NKPFPYF DL +VFG+D+A G    TP EM++       +DD++ ++ED  +P+P  +E   GE+  +T +S     GSS+ SK+R +
Subjt:  WFEGHPAARGLRNKPFPYFDDLAIVFGKDKANGKGASTPNEMATDL-----DDDVNTDVEDCYVPSPPIVESVVGEEFYTTRSSRIDTPGSSQGSKRRCT

Query:  VPADAVDTFCTEMRYVSTQIEKIALWPQHKDEIESARRKQLYGELQSIPGMDMDDCLLVAETLLADDKKFRSFLDYPT
           D +DTF   MR  S +I KIA W + K EIES+  K+LY ELQ+IPGMD+DDCL+VAE+LL D     +FLDYPT
Subjt:  VPADAVDTFCTEMRYVSTQIEKIALWPQHKDEIESARRKQLYGELQSIPGMDMDDCLLVAETLLADDKKFRSFLDYPT

TYK10886.1 retrotransposon protein [Cucumis melo var. makuwa]1.7e-3647.46Show/hide
Query:  WFEGHPAARGLRNKPFPYFDDLAIVFGKDKANGKGASTPNEMATDL-----DDDVNTDVEDCYVPSPPIVESVVGEEFYTTRSSRIDTPGSSQGSKRRCT
        W +GHP ARGL NK FPYF DL I+FG+D+A G    TP EM   +     +DD++ ++ED  +P+P  +E   GE+  +T +S     GSS+ SK+R +
Subjt:  WFEGHPAARGLRNKPFPYFDDLAIVFGKDKANGKGASTPNEMATDL-----DDDVNTDVEDCYVPSPPIVESVVGEEFYTTRSSRIDTPGSSQGSKRRCT

Query:  VPADAVDTFCTEMRYVSTQIEKIALWPQHKDEIESARRKQLYGELQSIPGMDMDDCLLVAETLLADDKKFRSFLDYP
           D +DTFC  MR  S +I KI  W + K EIES+  K+LY ELQ+IPGMD+DDCL+V E+LL D     +FL+YP
Subjt:  VPADAVDTFCTEMRYVSTQIEKIALWPQHKDEIESARRKQLYGELQSIPGMDMDDCLLVAETLLADDKKFRSFLDYP

XP_008460440.1 PREDICTED: uncharacterized protein LOC103499248 [Cucumis melo]2.2e-3648.02Show/hide
Query:  WFEGHPAARGLRNKPFPYFDDLAIVFGKDKANGKGASTPNEMATDL-----DDDVNTDVEDCYVPSPPIVESVVGEEFYTTRSSRIDTPGSSQGSKRRCT
        W +GHP ARGL NK FPYF DL I+FG+D+A G    TP EM   +     +DD++ ++ED  +P+P  +E   GE+  +T +S     GSS+ SK+R +
Subjt:  WFEGHPAARGLRNKPFPYFDDLAIVFGKDKANGKGASTPNEMATDL-----DDDVNTDVEDCYVPSPPIVESVVGEEFYTTRSSRIDTPGSSQGSKRRCT

Query:  VPADAVDTFCTEMRYVSTQIEKIALWPQHKDEIESARRKQLYGELQSIPGMDMDDCLLVAETLLADDKKFRSFLDYP
           D +DTF   MR  S +I KIA W + K EIES+  K+LY ELQ+IPGMD+DDCL+V E+LL D     +FLDYP
Subjt:  VPADAVDTFCTEMRYVSTQIEKIALWPQHKDEIESARRKQLYGELQSIPGMDMDDCLLVAETLLADDKKFRSFLDYP

XP_022158565.1 uncharacterized protein LOC111025018 [Momordica charantia]1.5e-2436.56Show/hide
Query:  WFEGHPAARGLRNKPFPYFDDLAIVFGKDKANGKGASTPNEMATD----LDDDVNTDVEDCYVPSPPI---VESVVGEEFYTTRSSRIDTPGSSQGSKR-
        W + HP A+GLRNKP P++DDL + FGKD+A G     P +MA+     + +D + + +D Y+P PP+    E  + E+   T +S+     SS GSKR 
Subjt:  WFEGHPAARGLRNKPFPYFDDLAIVFGKDKANGKGASTPNEMATD----LDDDVNTDVEDCYVPSPPI---VESVVGEEFYTTRSSRIDTPGSSQGSKR-

Query:  RCTVPADAVDTFCTEMRYVSTQIEKIALWPQHKDEIESARRKQLYGELQSIPGMDMDDCLLVAETLLADDKKFRSFLDYPTEWNPL
        R    ++ VD   T MR  +  +EK+A WP  K+E + ARRK ++ +L+ IP ++ +D + +   L+ + KK  SFL+ P E+  +
Subjt:  RCTVPADAVDTFCTEMRYVSTQIEKIALWPQHKDEIESARRKQLYGELQSIPGMDMDDCLLVAETLLADDKKFRSFLDYPTEWNPL

TrEMBL top hitse value%identityAlignment
A0A1S3CC17 uncharacterized protein LOC1034992481.1e-3648.02Show/hide
Query:  WFEGHPAARGLRNKPFPYFDDLAIVFGKDKANGKGASTPNEMATDL-----DDDVNTDVEDCYVPSPPIVESVVGEEFYTTRSSRIDTPGSSQGSKRRCT
        W +GHP ARGL NK FPYF DL I+FG+D+A G    TP EM   +     +DD++ ++ED  +P+P  +E   GE+  +T +S     GSS+ SK+R +
Subjt:  WFEGHPAARGLRNKPFPYFDDLAIVFGKDKANGKGASTPNEMATDL-----DDDVNTDVEDCYVPSPPIVESVVGEEFYTTRSSRIDTPGSSQGSKRRCT

Query:  VPADAVDTFCTEMRYVSTQIEKIALWPQHKDEIESARRKQLYGELQSIPGMDMDDCLLVAETLLADDKKFRSFLDYP
           D +DTF   MR  S +I KIA W + K EIES+  K+LY ELQ+IPGMD+DDCL+V E+LL D     +FLDYP
Subjt:  VPADAVDTFCTEMRYVSTQIEKIALWPQHKDEIESARRKQLYGELQSIPGMDMDDCLLVAETLLADDKKFRSFLDYP

A0A5A7VGQ0 Retrotransposon protein1.1e-3648.02Show/hide
Query:  WFEGHPAARGLRNKPFPYFDDLAIVFGKDKANGKGASTPNEMATDL-----DDDVNTDVEDCYVPSPPIVESVVGEEFYTTRSSRIDTPGSSQGSKRRCT
        W +GHP ARGL NK FPYF DL I+FG+D+A G    TP EM   +     +DD++ ++ED  +P+P  +E   GE+  +T +S     GSS+ SK+R +
Subjt:  WFEGHPAARGLRNKPFPYFDDLAIVFGKDKANGKGASTPNEMATDL-----DDDVNTDVEDCYVPSPPIVESVVGEEFYTTRSSRIDTPGSSQGSKRRCT

Query:  VPADAVDTFCTEMRYVSTQIEKIALWPQHKDEIESARRKQLYGELQSIPGMDMDDCLLVAETLLADDKKFRSFLDYP
           D +DTF   MR  S +I KIA W + K EIES+  K+LY ELQ+IPGMD+DDCL+V E+LL D     +FLDYP
Subjt:  VPADAVDTFCTEMRYVSTQIEKIALWPQHKDEIESARRKQLYGELQSIPGMDMDDCLLVAETLLADDKKFRSFLDYP

A0A5D3C7T4 Uncharacterized protein1.1e-3848.88Show/hide
Query:  WFEGHPAARGLRNKPFPYFDDLAIVFGKDKANGKGASTPNEMATDL-----DDDVNTDVEDCYVPSPPIVESVVGEEFYTTRSSRIDTPGSSQGSKRRCT
        W +GHP A+GL NKPFPYF DL +VFG+D+A G    TP EM++       +DD++ ++ED  +P+P  +E   GE+  +T +S     GSS+ SK+R +
Subjt:  WFEGHPAARGLRNKPFPYFDDLAIVFGKDKANGKGASTPNEMATDL-----DDDVNTDVEDCYVPSPPIVESVVGEEFYTTRSSRIDTPGSSQGSKRRCT

Query:  VPADAVDTFCTEMRYVSTQIEKIALWPQHKDEIESARRKQLYGELQSIPGMDMDDCLLVAETLLADDKKFRSFLDYPT
           D +DTF   MR  S +I KIA W + K EIES+  K+LY ELQ+IPGMD+DDCL+VAE+LL D     +FLDYPT
Subjt:  VPADAVDTFCTEMRYVSTQIEKIALWPQHKDEIESARRKQLYGELQSIPGMDMDDCLLVAETLLADDKKFRSFLDYPT

A0A5D3CKC1 Retrotransposon protein8.2e-3747.46Show/hide
Query:  WFEGHPAARGLRNKPFPYFDDLAIVFGKDKANGKGASTPNEMATDL-----DDDVNTDVEDCYVPSPPIVESVVGEEFYTTRSSRIDTPGSSQGSKRRCT
        W +GHP ARGL NK FPYF DL I+FG+D+A G    TP EM   +     +DD++ ++ED  +P+P  +E   GE+  +T +S     GSS+ SK+R +
Subjt:  WFEGHPAARGLRNKPFPYFDDLAIVFGKDKANGKGASTPNEMATDL-----DDDVNTDVEDCYVPSPPIVESVVGEEFYTTRSSRIDTPGSSQGSKRRCT

Query:  VPADAVDTFCTEMRYVSTQIEKIALWPQHKDEIESARRKQLYGELQSIPGMDMDDCLLVAETLLADDKKFRSFLDYP
           D +DTFC  MR  S +I KI  W + K EIES+  K+LY ELQ+IPGMD+DDCL+V E+LL D     +FL+YP
Subjt:  VPADAVDTFCTEMRYVSTQIEKIALWPQHKDEIESARRKQLYGELQSIPGMDMDDCLLVAETLLADDKKFRSFLDYP

A0A6J1DW73 uncharacterized protein LOC1110250187.2e-2536.56Show/hide
Query:  WFEGHPAARGLRNKPFPYFDDLAIVFGKDKANGKGASTPNEMATD----LDDDVNTDVEDCYVPSPPI---VESVVGEEFYTTRSSRIDTPGSSQGSKR-
        W + HP A+GLRNKP P++DDL + FGKD+A G     P +MA+     + +D + + +D Y+P PP+    E  + E+   T +S+     SS GSKR 
Subjt:  WFEGHPAARGLRNKPFPYFDDLAIVFGKDKANGKGASTPNEMATD----LDDDVNTDVEDCYVPSPPI---VESVVGEEFYTTRSSRIDTPGSSQGSKR-

Query:  RCTVPADAVDTFCTEMRYVSTQIEKIALWPQHKDEIESARRKQLYGELQSIPGMDMDDCLLVAETLLADDKKFRSFLDYPTEWNPL
        R    ++ VD   T MR  +  +EK+A WP  K+E + ARRK ++ +L+ IP ++ +D + +   L+ + KK  SFL+ P E+  +
Subjt:  RCTVPADAVDTFCTEMRYVSTQIEKIALWPQHKDEIESARRKQLYGELQSIPGMDMDDCLLVAETLLADDKKFRSFLDYPTEWNPL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGTATTTGCTAACGACGGAGGAAAGGCGGATTCTGGCGGGCATTGGAGTGGGGAGGGGGATTGTGAAGCATGTAGTGGACGTGATTCCATCTTGCCGCTCCATAAA
CTCGACCCTCTCTCTTGCTGCCTCCAAATTTCCATCAATTTTCTTGTATCGTGGCTTCCTCCCATTAAAAAAAGTGTTCTCTGTTCTGATTGTGAGCTTGATATGTTCAC
TGTTTGATGAGGTTTACCTTCTAACTAATGCCTTTGCTTTGTGTTTCTTTTCTTCTGTTTATCTCCAATGTCTTTATGGTACGTGGCCTACTCTTGAATGTGCATTTCAT
ATGTCCATGATCACGAATCCTAGAGGTCTTCTTTCCTCATACTCTAGGCCAGGCCGATGCCACGAGATCCTCTTGAAGAAACCAGAGCCAATCACAAATAATTGCACCGA
TGAGCGATGGCGATGGTTCGAGGGACACCCAGCTGCTCGTGGTCTGAGGAACAAGCCATTCCCCTACTTCGATGACCTAGCAATTGTTTTCGGGAAGGATAAGGCCAATG
GAAAAGGTGCTTCGACTCCGAACGAAATGGCCACTGACTTGGATGATGACGTGAACACAGATGTTGAAGATTGTTATGTCCCTTCCCCTCCTATAGTTGAATCTGTGGTA
GGTGAAGAATTTTATACCACCCGTTCGAGCAGGATTGACACGCCAGGATCATCACAGGGAAGTAAGAGGAGGTGCACAGTACCAGCAGACGCTGTCGACACATTTTGCAC
GGAGATGCGTTATGTGTCCACACAAATCGAGAAGATCGCGCTCTGGCCTCAACATAAGGATGAAATAGAGTCAGCTCGACGTAAACAATTGTATGGGGAACTACAGTCTA
TCCCGGGAATGGACATGGATGACTGTTTGCTTGTGGCCGAGACTCTGTTGGCTGATGACAAGAAATTTCGCTCATTCCTCGACTACCCCACTGAATGGAACCCCTTAGTG
TTTCCTGAGATTGATTCAAGGTTCATGACCCAACAAGAAAAAGCAAGGGAAGCTAGAATTTCCCCAGAACGAAATGTGACTGCATTTCCGGAAAAACAGAGGCAGTTCCG
AGTCTACCGCAGGATTATAGATTGCATTCGTGAATCATCTATGTCGGAGTCGAGCACAGAAATTTGCATAACGGTTGAGTTAGAACCTCTAGAAGAAGCTTCTTACATAC
AAGAGTTTTCGATGGAACAACCTGGAGTCGATCCTCAAGTTGATTCACAGAACCGTAGAAGGGAGCAAAATGGTGGGAGAATTCCTCCAGTTCCTCCAGTTCCACTGGTG
CCACTGAAGGTGTACATATTACACATGCGGAAGCAATTGAAGATCGAAAGCACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGGTATTTGCTAACGACGGAGGAAAGGCGGATTCTGGCGGGCATTGGAGTGGGGAGGGGGATTGTGAAGCATGTAGTGGACGTGATTCCATCTTGCCGCTCCATAAA
CTCGACCCTCTCTCTTGCTGCCTCCAAATTTCCATCAATTTTCTTGTATCGTGGCTTCCTCCCATTAAAAAAAGTGTTCTCTGTTCTGATTGTGAGCTTGATATGTTCAC
TGTTTGATGAGGTTTACCTTCTAACTAATGCCTTTGCTTTGTGTTTCTTTTCTTCTGTTTATCTCCAATGTCTTTATGGTACGTGGCCTACTCTTGAATGTGCATTTCAT
ATGTCCATGATCACGAATCCTAGAGGTCTTCTTTCCTCATACTCTAGGCCAGGCCGATGCCACGAGATCCTCTTGAAGAAACCAGAGCCAATCACAAATAATTGCACCGA
TGAGCGATGGCGATGGTTCGAGGGACACCCAGCTGCTCGTGGTCTGAGGAACAAGCCATTCCCCTACTTCGATGACCTAGCAATTGTTTTCGGGAAGGATAAGGCCAATG
GAAAAGGTGCTTCGACTCCGAACGAAATGGCCACTGACTTGGATGATGACGTGAACACAGATGTTGAAGATTGTTATGTCCCTTCCCCTCCTATAGTTGAATCTGTGGTA
GGTGAAGAATTTTATACCACCCGTTCGAGCAGGATTGACACGCCAGGATCATCACAGGGAAGTAAGAGGAGGTGCACAGTACCAGCAGACGCTGTCGACACATTTTGCAC
GGAGATGCGTTATGTGTCCACACAAATCGAGAAGATCGCGCTCTGGCCTCAACATAAGGATGAAATAGAGTCAGCTCGACGTAAACAATTGTATGGGGAACTACAGTCTA
TCCCGGGAATGGACATGGATGACTGTTTGCTTGTGGCCGAGACTCTGTTGGCTGATGACAAGAAATTTCGCTCATTCCTCGACTACCCCACTGAATGGAACCCCTTAGTG
TTTCCTGAGATTGATTCAAGGTTCATGACCCAACAAGAAAAAGCAAGGGAAGCTAGAATTTCCCCAGAACGAAATGTGACTGCATTTCCGGAAAAACAGAGGCAGTTCCG
AGTCTACCGCAGGATTATAGATTGCATTCGTGAATCATCTATGTCGGAGTCGAGCACAGAAATTTGCATAACGGTTGAGTTAGAACCTCTAGAAGAAGCTTCTTACATAC
AAGAGTTTTCGATGGAACAACCTGGAGTCGATCCTCAAGTTGATTCACAGAACCGTAGAAGGGAGCAAAATGGTGGGAGAATTCCTCCAGTTCCTCCAGTTCCACTGGTG
CCACTGAAGGTGTACATATTACACATGCGGAAGCAATTGAAGATCGAAAGCACTTAA
Protein sequenceShow/hide protein sequence
MRYLLTTEERRILAGIGVGRGIVKHVVDVIPSCRSINSTLSLAASKFPSIFLYRGFLPLKKVFSVLIVSLICSLFDEVYLLTNAFALCFFSSVYLQCLYGTWPTLECAFH
MSMITNPRGLLSSYSRPGRCHEILLKKPEPITNNCTDERWRWFEGHPAARGLRNKPFPYFDDLAIVFGKDKANGKGASTPNEMATDLDDDVNTDVEDCYVPSPPIVESVV
GEEFYTTRSSRIDTPGSSQGSKRRCTVPADAVDTFCTEMRYVSTQIEKIALWPQHKDEIESARRKQLYGELQSIPGMDMDDCLLVAETLLADDKKFRSFLDYPTEWNPLV
FPEIDSRFMTQQEKAREARISPERNVTAFPEKQRQFRVYRRIIDCIRESSMSESSTEICITVELEPLEEASYIQEFSMEQPGVDPQVDSQNRRREQNGGRIPPVPPVPLV
PLKVYILHMRKQLKIEST