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Spg010919 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg010919
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionBromo domain-containing protein
Genome locationscaffold10:9344747..9350474
RNA-Seq ExpressionSpg010919
SyntenySpg010919
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049895.1 uncharacterized protein E6C27_scaffold13G00470 [Cucumis melo var. makuwa]5.0e-1369.01Show/hide
Query:  ELKSYASQVVDGTFEMNEDEIL--VFGPEKHGRVRGYGVGVTP-ELFGSSSNVRDLERRINESEQRLQESE
        ELK  ASQV++G  +MNED+I   VFGPEKHG VRGYGVGVTP ELF SSS V DLE  +NE E RL ESE
Subjt:  ELKSYASQVVDGTFEMNEDEIL--VFGPEKHGRVRGYGVGVTP-ELFGSSSNVRDLERRINESEQRLQESE

KAA0056079.1 bromodomain-containing factor 1-like isoform X2 [Cucumis melo var. makuwa]2.5e-1268.75Show/hide
Query:  LKSYASQVVDGTFEMNEDEILV--FGPEKHGRVRGYGVGVT-PELFGSSSNVRDLERRINESEQ
        +KSYASQV+DGT +MN+D+I V   GPEKH  VRGYGVGV   ELFGSSS V DLERR+NES++
Subjt:  LKSYASQVVDGTFEMNEDEILV--FGPEKHGRVRGYGVGVT-PELFGSSSNVRDLERRINESEQ

ONH96063.1 hypothetical protein PRUPE_7G105300 [Prunus persica]5.2e-1052.08Show/hide
Query:  SELKSYASQVVDGTFEMNEDEIL--VFGPEKHGRVRGYGVGVTP-ELFG----SSSNVRDLERRINESEQRLQESERQRKVEVQALKDQIVELENL
        S+LK   +Q+     EM EDEI   VFGPE+  RVRGYG GVTP EL+G    SSS V +L R++ ES+QR +ESER+   EVQ LK+Q+  +E L
Subjt:  SELKSYASQVVDGTFEMNEDEIL--VFGPEKHGRVRGYGVGVTP-ELFG----SSSNVRDLERRINESEQRLQESERQRKVEVQALKDQIVELENL

XP_008457059.1 PREDICTED: uncharacterized protein LOC103496828 [Cucumis melo]2.9e-1370.31Show/hide
Query:  LKSYASQVVDGTFEMNEDEILV--FGPEKHGRVRGYGVGVT-PELFGSSSNVRDLERRINESEQ
        +KSYASQV+DGT +MN+D+I V  FGPEKH  VRGYGVGV   ELFGSSS V DLERR+NES++
Subjt:  LKSYASQVVDGTFEMNEDEILV--FGPEKHGRVRGYGVGVT-PELFGSSSNVRDLERRINESEQ

XP_038904040.1 uncharacterized protein LOC120090445 [Benincasa hispida]3.1e-2370.41Show/hide
Query:  SELKSYASQVVDGTFEMNEDE--ILVFGPEKHGRVRGYGVGVTP-ELFGSSSNVRDLERRINESEQRLQESERQRK-------VEVQALKDQIVELEN
        S+LKSYASQV+DGT +MNEDE  + VFGPEKHG V GYGVGVTP ELFGSSS +RD ERR+NESEQRLQE E+QRK       +EV+ LK QI ELEN
Subjt:  SELKSYASQVVDGTFEMNEDE--ILVFGPEKHGRVRGYGVGVTP-ELFGSSSNVRDLERRINESEQRLQESERQRK-------VEVQALKDQIVELEN

TrEMBL top hitse value%identityAlignment
A0A1S3C480 uncharacterized protein LOC1034968281.4e-1370.31Show/hide
Query:  LKSYASQVVDGTFEMNEDEILV--FGPEKHGRVRGYGVGVT-PELFGSSSNVRDLERRINESEQ
        +KSYASQV+DGT +MN+D+I V  FGPEKH  VRGYGVGV   ELFGSSS V DLERR+NES++
Subjt:  LKSYASQVVDGTFEMNEDEILV--FGPEKHGRVRGYGVGVT-PELFGSSSNVRDLERRINESEQ

A0A2N9H9X0 Uncharacterized protein2.3e-1145.22Show/hide
Query:  KSYASQVVDGTFEMNEDEIL--VFGPEKHGRVRGYGVGVTP-ELFG-SSSNVRDLERRINESEQR-----------LQESERQRK---VEVQALKDQIVE
        K++ +QV +G+ +M EDE+   VFGPE HGRVRGYG GVTP EL+G SSS++RDL+R++ ESE++           L+ESE +RK     ++ L+ Q+ +
Subjt:  KSYASQVVDGTFEMNEDEIL--VFGPEKHGRVRGYGVGVTP-ELFG-SSSNVRDLERRINESEQR-----------LQESERQRK---VEVQALKDQIVE

Query:  LENLQLEVMELLQTP
        +E+L   VM+ L  P
Subjt:  LENLQLEVMELLQTP

A0A2N9HCP8 Uncharacterized protein3.9e-1147.25Show/hide
Query:  LKSYASQVVDGTFEMNEDEIL--VFGPEKHGRVRGYGVGVT-PELFGSSSN-VRDLERRINESEQRLQESERQRKVEVQALKDQIVELENL
        L+S  +QV +G+ +M+ED++   VFGPE+HGRVRGYG GVT  +L+GSSS+ + DLE+R+ ESEQ   E+  +   +V+ L++Q+++L++L
Subjt:  LKSYASQVVDGTFEMNEDEIL--VFGPEKHGRVRGYGVGVT-PELFGSSSN-VRDLERRINESEQRLQESERQRKVEVQALKDQIVELENL

A0A5A7U8E9 Uncharacterized protein2.4e-1369.01Show/hide
Query:  ELKSYASQVVDGTFEMNEDEIL--VFGPEKHGRVRGYGVGVTP-ELFGSSSNVRDLERRINESEQRLQESE
        ELK  ASQV++G  +MNED+I   VFGPEKHG VRGYGVGVTP ELF SSS V DLE  +NE E RL ESE
Subjt:  ELKSYASQVVDGTFEMNEDEIL--VFGPEKHGRVRGYGVGVTP-ELFGSSSNVRDLERRINESEQRLQESE

A0A5D3BP34 Bromodomain-containing factor 1-like isoform X21.2e-1268.75Show/hide
Query:  LKSYASQVVDGTFEMNEDEILV--FGPEKHGRVRGYGVGVT-PELFGSSSNVRDLERRINESEQ
        +KSYASQV+DGT +MN+D+I V   GPEKH  VRGYGVGV   ELFGSSS V DLERR+NES++
Subjt:  LKSYASQVVDGTFEMNEDEILV--FGPEKHGRVRGYGVGVT-PELFGSSSNVRDLERRINESEQ

SwissProt top hitse value%identityAlignment
O82232 UPF0057 membrane protein At2g240401.8e-0561.54Show/hide
Query:  LGACLGFNCCTVEFCLCLILTPLDYVPGIIYTLHAIVFV
        +G CL   CCTVEF +CLILT L Y+PGIIY ++AI F+
Subjt:  LGACLGFNCCTVEFCLCLILTPLDYVPGIIYTLHAIVFV

Q9M095 UPF0057 membrane protein At4g306503.6e-0665.79Show/hide
Query:  LGACLGFNCCTVEFCLCLILTPLDYVPGIIYTLHAIVF
        LG CL   CCTVEF +CL+LT L Y+PGIIY L+ IVF
Subjt:  LGACLGFNCCTVEFCLCLILTPLDYVPGIIYTLHAIVF

Q9SUI0 UPF0057 membrane protein At4g306601.4e-0563.16Show/hide
Query:  LGACLGFNCCTVEFCLCLILTPLDYVPGIIYTLHAIVF
        LG C    CCTVEF +CL+LT L YVPGIIY ++ IVF
Subjt:  LGACLGFNCCTVEFCLCLILTPLDYVPGIIYTLHAIVF

Arabidopsis top hitse value%identityAlignment
AT2G24040.1 Low temperature and salt responsive protein family1.3e-0661.54Show/hide
Query:  LGACLGFNCCTVEFCLCLILTPLDYVPGIIYTLHAIVFV
        +G CL   CCTVEF +CLILT L Y+PGIIY ++AI F+
Subjt:  LGACLGFNCCTVEFCLCLILTPLDYVPGIIYTLHAIVFV

AT4G28088.1 Low temperature and salt responsive protein family3.9e-0867.5Show/hide
Query:  LGACLGFNCCTVEFCLCLILTPLDYVPGIIYTLHAIVFVE
        LG CL   CCT EF +CLILT L YVPGIIY L+AIV+V+
Subjt:  LGACLGFNCCTVEFCLCLILTPLDYVPGIIYTLHAIVFVE

AT4G30650.1 Low temperature and salt responsive protein family2.6e-0765.79Show/hide
Query:  LGACLGFNCCTVEFCLCLILTPLDYVPGIIYTLHAIVF
        LG CL   CCTVEF +CL+LT L Y+PGIIY L+ IVF
Subjt:  LGACLGFNCCTVEFCLCLILTPLDYVPGIIYTLHAIVF

AT4G30660.1 Low temperature and salt responsive protein family9.7e-0763.16Show/hide
Query:  LGACLGFNCCTVEFCLCLILTPLDYVPGIIYTLHAIVF
        LG C    CCTVEF +CL+LT L YVPGIIY ++ IVF
Subjt:  LGACLGFNCCTVEFCLCLILTPLDYVPGIIYTLHAIVF

AT4G30660.2 Low temperature and salt responsive protein family9.7e-0763.16Show/hide
Query:  LGACLGFNCCTVEFCLCLILTPLDYVPGIIYTLHAIVF
        LG C    CCTVEF +CL+LT L YVPGIIY ++ IVF
Subjt:  LGACLGFNCCTVEFCLCLILTPLDYVPGIIYTLHAIVF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGCGACGATGAGGTGATGACGATCTTGTGCTCGGTGACCGGTGAGAATAGAGAGACAGAGAGAGCCAGAGAGGAGGAGACAGCGATCACGCTAGGTCTAAACAC
TCTCCCTTTTTGTTTGTCATCGGTTCGTTCGTCGATCGTGATCAATAGTTCGCAGGCTGCCGTCAACCATTCATCCCTCGGAGCTTGCCTCGGTTTCAATTGTTGCACGG
TGGAATTTTGTCTGTGTTTGATTTTGACTCCACTCGATTACGTTCCAGGGATCATCTACACTCTCCATGCCATCGTCTTCGTTGAGTTCATGCCCGCAGTGATCTTGCTG
AGTGCTTTTGACAAATCACTTAGAGCACGATTGTTGAAGTCGGAACTCAAATCATATGCTTCTCAAGTAGTTGATGGTACATTTGAAATGAACGAGGATGAGATTTTAGT
TTTTGGACCAGAGAAACATGGACGTGTTCGTGGTTATGGAGTAGGTGTTACTCCTGAGTTGTTTGGATCATCTTCTAATGTACGTGACCTTGAGCGTCGTATTAACGAGT
CTGAACAACGTCTTCAAGAATCTGAACGACAAAGAAAAGTCGAGGTACAAGCACTCAAAGATCAAATTGTCGAATTAGAAAATCTGCAACTTGAGGTAATGGAACTCCTT
CAAACTCCCCATCATAAGCCTCATCAAGACATCGAATTTAGTGCTCGTGTCGACGACGACGGTGAAAATAATGGAGATGGCAGCCGAAATGAGGAAGAAGACAGAGACGA
AGATGAAATTGAGGAATCGAATGAAGAAGATGAAGATGAAACTGAGCGATGGGATGAGGAAGAGGAAGAAGAGGAAGGGGAATTGGAGAGGAGGATAGAAGAATTCATAG
CTAAGACCGTCGCAAGCCATCCGCCGCTACTGCCTCTCGTCGTCGAGCTCCGCCGCTGCAGTGACGTCGCCAACCGCCACGAGCCGCCGCCGGTAACGTCTCTCAGATTT
TTCTCTCTCTCGGTTTTCTCTCTCTACTGTGTTAGTAATGGCCGCACTTTTTTTTCCGTTCAGATTCGAGCAGCCACTGCCGTCCGCGGGCTCGTTCGCCTCTTTTCAAA
TCTGTCCGTCGTTTCAGACCTGTTCGTCTCTGTCATTCGGAACCGATCGCCGCCACCTTCGCCTCAAGGAAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGGCGACGATGAGGTGATGACGATCTTGTGCTCGGTGACCGGTGAGAATAGAGAGACAGAGAGAGCCAGAGAGGAGGAGACAGCGATCACGCTAGGTCTAAACAC
TCTCCCTTTTTGTTTGTCATCGGTTCGTTCGTCGATCGTGATCAATAGTTCGCAGGCTGCCGTCAACCATTCATCCCTCGGAGCTTGCCTCGGTTTCAATTGTTGCACGG
TGGAATTTTGTCTGTGTTTGATTTTGACTCCACTCGATTACGTTCCAGGGATCATCTACACTCTCCATGCCATCGTCTTCGTTGAGTTCATGCCCGCAGTGATCTTGCTG
AGTGCTTTTGACAAATCACTTAGAGCACGATTGTTGAAGTCGGAACTCAAATCATATGCTTCTCAAGTAGTTGATGGTACATTTGAAATGAACGAGGATGAGATTTTAGT
TTTTGGACCAGAGAAACATGGACGTGTTCGTGGTTATGGAGTAGGTGTTACTCCTGAGTTGTTTGGATCATCTTCTAATGTACGTGACCTTGAGCGTCGTATTAACGAGT
CTGAACAACGTCTTCAAGAATCTGAACGACAAAGAAAAGTCGAGGTACAAGCACTCAAAGATCAAATTGTCGAATTAGAAAATCTGCAACTTGAGGTAATGGAACTCCTT
CAAACTCCCCATCATAAGCCTCATCAAGACATCGAATTTAGTGCTCGTGTCGACGACGACGGTGAAAATAATGGAGATGGCAGCCGAAATGAGGAAGAAGACAGAGACGA
AGATGAAATTGAGGAATCGAATGAAGAAGATGAAGATGAAACTGAGCGATGGGATGAGGAAGAGGAAGAAGAGGAAGGGGAATTGGAGAGGAGGATAGAAGAATTCATAG
CTAAGACCGTCGCAAGCCATCCGCCGCTACTGCCTCTCGTCGTCGAGCTCCGCCGCTGCAGTGACGTCGCCAACCGCCACGAGCCGCCGCCGGTAACGTCTCTCAGATTT
TTCTCTCTCTCGGTTTTCTCTCTCTACTGTGTTAGTAATGGCCGCACTTTTTTTTCCGTTCAGATTCGAGCAGCCACTGCCGTCCGCGGGCTCGTTCGCCTCTTTTCAAA
TCTGTCCGTCGTTTCAGACCTGTTCGTCTCTGTCATTCGGAACCGATCGCCGCCACCTTCGCCTCAAGGAAACTGA
Protein sequenceShow/hide protein sequence
MDGDDEVMTILCSVTGENRETERAREEETAITLGLNTLPFCLSSVRSSIVINSSQAAVNHSSLGACLGFNCCTVEFCLCLILTPLDYVPGIIYTLHAIVFVEFMPAVILL
SAFDKSLRARLLKSELKSYASQVVDGTFEMNEDEILVFGPEKHGRVRGYGVGVTPELFGSSSNVRDLERRINESEQRLQESERQRKVEVQALKDQIVELENLQLEVMELL
QTPHHKPHQDIEFSARVDDDGENNGDGSRNEEEDRDEDEIEESNEEDEDETERWDEEEEEEEGELERRIEEFIAKTVASHPPLLPLVVELRRCSDVANRHEPPPVTSLRF
FSLSVFSLYCVSNGRTFFSVQIRAATAVRGLVRLFSNLSVVSDLFVSVIRNRSPPPSPQGN