; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg010923 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg010923
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold10:8858907..8861773
RNA-Seq ExpressionSpg010923
SyntenySpg010923
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042067.1 retrotransposon gag protein [Cucumis melo var. makuwa]7.8e-4444.02Show/hide
Query:  KAEVAKNEKVLCSEEKKTNAPVLRYVPLSRRKKGDSPFAECSNNLRVGDIEILKESFITPLTKISKQE--------------------------------
        KA  +  + ++  +EK +N P+LRYVPLSR KKG+SPF +    L+VGDIE+LKESF TP TKI+KQE                                
Subjt:  KAEVAKNEKVLCSEEKKTNAPVLRYVPLSRRKKGDSPFAECSNNLRVGDIEILKESFITPLTKISKQE--------------------------------

Query:  -----------------------KKLQKAGYAIPISRAGLGYKSPEPVRITRKGKTKVADTLHITVEEIDDSEEAKENIDHRISAFDRIGPSVTRSSIFQ
                               KKL + G+AIP+SR GLGYKSPEP+RITRKGK KV D  HITV+E+D  +E KE    R SAFDRI P V R+ +F+
Subjt:  -----------------------KKLQKAGYAIPISRAGLGYKSPEPVRITRKGKTKVADTLHITVEEIDDSEEAKENIDHRISAFDRIGPSVTRSSIFQ

Query:  RLSMIATEGESQHPTSGSTRPSAFQRLSMAFEEKESVCST-PTTRLSAFQRLSVATKRS
        RLSM   E +    TS   R SAFQRL+M  ++++ +C    TTR SAF+RLS+A K++
Subjt:  RLSMIATEGESQHPTSGSTRPSAFQRLSMAFEEKESVCST-PTTRLSAFQRLSVATKRS

KAA0047477.1 uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]1.0e-4342.52Show/hide
Query:  FKNTKE--KASPEGKMGRKTSQKSKVSLSQTKAEVAKNEKVLCSEEKKTNAPVLRYVPLSRRKKGDSPFAECSNNLRVGDIEILKESFITPLTKISKQE-
        FKN +E   +    K     SQ++    ++TK    + EK+   +++ +N PVLRY+PLSRRKKG+SPF ECS NL V + EILKE+F  PLTKI K E 
Subjt:  FKNTKE--KASPEGKMGRKTSQKSKVSLSQTKAEVAKNEKVLCSEEKKTNAPVLRYVPLSRRKKGDSPFAECSNNLRVGDIEILKESFITPLTKISKQE-

Query:  ----------------------------------------------------------KKLQKAGYAIPISRAGLGYKSPEPVRITRKGKTKVADTLHIT
                                                                  KKLQK GY+IP SRAG+GY+S EPVRIT KGK KVA+T HIT
Subjt:  ----------------------------------------------------------KKLQKAGYAIPISRAGLGYKSPEPVRITRKGKTKVADTLHIT

Query:  VEEIDDSEEAKENIDHRISAFDRIGPSVTRSSIFQRLSMIATEGESQHPTSGSTRPSAFQRLSMAFEEKESVCSTPTTRLSAFQRLSVATKRSK
        VEE  DSEE K+    R S FDRI  S  R S+FQR+S    +  +Q  T  STR SAFQRL+ + ++  S+  TPTTR SAF+RLSV+  R +
Subjt:  VEEIDDSEEAKENIDHRISAFDRIGPSVTRSSIFQRLSMIATEGESQHPTSGSTRPSAFQRLSMAFEEKESVCSTPTTRLSAFQRLSVATKRSK

KAA0051585.1 uncharacterized protein E6C27_scaffold174G001280 [Cucumis melo var. makuwa]9.2e-4542.96Show/hide
Query:  MGRKTSQKSKVSLSQTKAEVAKN--EKVLCSEEKKTNAPVLRYVPLSRRKKGDSPFAECSNNLRVGDIEILKESFITPLTKISKQE--------------
        +  K   KS  +    K+E + N  + V+  +EK +N P+LRYVPLSRRKKG+SPF E    L+VG+IE+LKESF TPLTKI+KQE              
Subjt:  MGRKTSQKSKVSLSQTKAEVAKN--EKVLCSEEKKTNAPVLRYVPLSRRKKGDSPFAECSNNLRVGDIEILKESFITPLTKISKQE--------------

Query:  -----------------------------------------KKLQKAGYAIPISRAGLGYKSPEPVRITRKGKTKVADTLHITVEEIDDSEEAKENIDHR
                                                 KKL + G+ IP+SR GLGYKSPEP+RITRKGK KV D+ HIT++E D  EE KE    R
Subjt:  -----------------------------------------KKLQKAGYAIPISRAGLGYKSPEPVRITRKGKTKVADTLHITVEEIDDSEEAKENIDHR

Query:  ISAFDRIGPSVTRSSIFQRLSMIATEGESQHPTSGSTRPSAFQRLSMAFEEKESVCSTP-TTRLSAFQRLSVATKRS
         SAFDRI P V R+ +F++LSM   E +    TS   R SAFQRL++ F+E++ +C T  TT+ SAF+RLS+  K++
Subjt:  ISAFDRIGPSVTRSSIFQRLSMIATEGESQHPTSGSTRPSAFQRLSMAFEEKESVCSTP-TTRLSAFQRLSVATKRS

KAA0053731.1 uncharacterized protein E6C27_scaffold135G001080 [Cucumis melo var. makuwa]5.9e-4442.52Show/hide
Query:  FKNTKE--KASPEGKMGRKTSQKSKVSLSQTKAEVAKNEKVLCSEEKKTNAPVLRYVPLSRRKKGDSPFAECSNNLRVGDIEILKESFITPLTKISKQE-
        FKN +E   +    K     SQ++  S ++TK    + EK+    ++ +N PVLRY+PLSRRKKG+SPFAECS NL V + EILKE+FI PLTKI K E 
Subjt:  FKNTKE--KASPEGKMGRKTSQKSKVSLSQTKAEVAKNEKVLCSEEKKTNAPVLRYVPLSRRKKGDSPFAECSNNLRVGDIEILKESFITPLTKISKQE-

Query:  ----------------------------------------------------------KKLQKAGYAIPISRAGLGYKSPEPVRITRKGKTKVADTLHIT
                                                                   KLQK GY+IP SRAG+GY+S EPVRIT KGKTKVA+T HIT
Subjt:  ----------------------------------------------------------KKLQKAGYAIPISRAGLGYKSPEPVRITRKGKTKVADTLHIT

Query:  VEEIDDSEEAKENIDHRISAFDRIGPSVTRSSIFQRLSMIATEGESQHPTSGSTRPSAFQRLSMAFEEKESVCSTPTTRLSAFQRLSVATKRSK
        VEE  DS+E K++   R S FDRI  S  R S+FQR+S   T+  +Q  T  STR SAFQRL+   ++ +S+  TPTTR SAF+ L ++  R +
Subjt:  VEEIDDSEEAKENIDHRISAFDRIGPSVTRSSIFQRLSMIATEGESQHPTSGSTRPSAFQRLSMAFEEKESVCSTPTTRLSAFQRLSVATKRSK

TYJ98225.1 uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]1.0e-4342.52Show/hide
Query:  FKNTKE--KASPEGKMGRKTSQKSKVSLSQTKAEVAKNEKVLCSEEKKTNAPVLRYVPLSRRKKGDSPFAECSNNLRVGDIEILKESFITPLTKISKQE-
        FKN +E   +    K     SQ++    ++TK    + EK+   +++ +N PVLRY+PLSRRKKG+SPF ECS NL V + EILKE+F  PLTKI K E 
Subjt:  FKNTKE--KASPEGKMGRKTSQKSKVSLSQTKAEVAKNEKVLCSEEKKTNAPVLRYVPLSRRKKGDSPFAECSNNLRVGDIEILKESFITPLTKISKQE-

Query:  ----------------------------------------------------------KKLQKAGYAIPISRAGLGYKSPEPVRITRKGKTKVADTLHIT
                                                                  KKLQK GY+IP SRAG+GY+S EPVRIT KGK KVA+T HIT
Subjt:  ----------------------------------------------------------KKLQKAGYAIPISRAGLGYKSPEPVRITRKGKTKVADTLHIT

Query:  VEEIDDSEEAKENIDHRISAFDRIGPSVTRSSIFQRLSMIATEGESQHPTSGSTRPSAFQRLSMAFEEKESVCSTPTTRLSAFQRLSVATKRSK
        VEE  DSEE K+    R S FDRI  S  R S+FQR+S    +  +Q  T  STR SAFQRL+ + ++  S+  TPTTR SAF+RLSV+  R +
Subjt:  VEEIDDSEEAKENIDHRISAFDRIGPSVTRSSIFQRLSMIATEGESQHPTSGSTRPSAFQRLSMAFEEKESVCSTPTTRLSAFQRLSVATKRSK

TrEMBL top hitse value%identityAlignment
A0A5A7TJZ7 Retrotransposon gag protein3.8e-4444.02Show/hide
Query:  KAEVAKNEKVLCSEEKKTNAPVLRYVPLSRRKKGDSPFAECSNNLRVGDIEILKESFITPLTKISKQE--------------------------------
        KA  +  + ++  +EK +N P+LRYVPLSR KKG+SPF +    L+VGDIE+LKESF TP TKI+KQE                                
Subjt:  KAEVAKNEKVLCSEEKKTNAPVLRYVPLSRRKKGDSPFAECSNNLRVGDIEILKESFITPLTKISKQE--------------------------------

Query:  -----------------------KKLQKAGYAIPISRAGLGYKSPEPVRITRKGKTKVADTLHITVEEIDDSEEAKENIDHRISAFDRIGPSVTRSSIFQ
                               KKL + G+AIP+SR GLGYKSPEP+RITRKGK KV D  HITV+E+D  +E KE    R SAFDRI P V R+ +F+
Subjt:  -----------------------KKLQKAGYAIPISRAGLGYKSPEPVRITRKGKTKVADTLHITVEEIDDSEEAKENIDHRISAFDRIGPSVTRSSIFQ

Query:  RLSMIATEGESQHPTSGSTRPSAFQRLSMAFEEKESVCST-PTTRLSAFQRLSVATKRS
        RLSM   E +    TS   R SAFQRL+M  ++++ +C    TTR SAF+RLS+A K++
Subjt:  RLSMIATEGESQHPTSGSTRPSAFQRLSMAFEEKESVCST-PTTRLSAFQRLSVATKRS

A0A5A7UD46 Uncharacterized protein4.4e-4542.96Show/hide
Query:  MGRKTSQKSKVSLSQTKAEVAKN--EKVLCSEEKKTNAPVLRYVPLSRRKKGDSPFAECSNNLRVGDIEILKESFITPLTKISKQE--------------
        +  K   KS  +    K+E + N  + V+  +EK +N P+LRYVPLSRRKKG+SPF E    L+VG+IE+LKESF TPLTKI+KQE              
Subjt:  MGRKTSQKSKVSLSQTKAEVAKN--EKVLCSEEKKTNAPVLRYVPLSRRKKGDSPFAECSNNLRVGDIEILKESFITPLTKISKQE--------------

Query:  -----------------------------------------KKLQKAGYAIPISRAGLGYKSPEPVRITRKGKTKVADTLHITVEEIDDSEEAKENIDHR
                                                 KKL + G+ IP+SR GLGYKSPEP+RITRKGK KV D+ HIT++E D  EE KE    R
Subjt:  -----------------------------------------KKLQKAGYAIPISRAGLGYKSPEPVRITRKGKTKVADTLHITVEEIDDSEEAKENIDHR

Query:  ISAFDRIGPSVTRSSIFQRLSMIATEGESQHPTSGSTRPSAFQRLSMAFEEKESVCSTP-TTRLSAFQRLSVATKRS
         SAFDRI P V R+ +F++LSM   E +    TS   R SAFQRL++ F+E++ +C T  TT+ SAF+RLS+  K++
Subjt:  ISAFDRIGPSVTRSSIFQRLSMIATEGESQHPTSGSTRPSAFQRLSMAFEEKESVCSTP-TTRLSAFQRLSVATKRS

A0A5A7UJR2 Reverse transcriptase2.9e-4442.52Show/hide
Query:  FKNTKE--KASPEGKMGRKTSQKSKVSLSQTKAEVAKNEKVLCSEEKKTNAPVLRYVPLSRRKKGDSPFAECSNNLRVGDIEILKESFITPLTKISKQE-
        FKN +E   +    K     SQ++  S ++TK    + EK+    ++ +N PVLRY+PLSRRKKG+SPFAECS NL V + EILKE+FI PLTKI K E 
Subjt:  FKNTKE--KASPEGKMGRKTSQKSKVSLSQTKAEVAKNEKVLCSEEKKTNAPVLRYVPLSRRKKGDSPFAECSNNLRVGDIEILKESFITPLTKISKQE-

Query:  ----------------------------------------------------------KKLQKAGYAIPISRAGLGYKSPEPVRITRKGKTKVADTLHIT
                                                                   KLQK GY+IP SRAG+GY+S EPVRIT KGKTKVA+T HIT
Subjt:  ----------------------------------------------------------KKLQKAGYAIPISRAGLGYKSPEPVRITRKGKTKVADTLHIT

Query:  VEEIDDSEEAKENIDHRISAFDRIGPSVTRSSIFQRLSMIATEGESQHPTSGSTRPSAFQRLSMAFEEKESVCSTPTTRLSAFQRLSVATKRSK
        VEE  DS+E K++   R S FDRI  S  R S+FQR+S   T+  +Q  T  STR SAFQRL+   ++ +S+  TPTTR SAF+ L ++  R +
Subjt:  VEEIDDSEEAKENIDHRISAFDRIGPSVTRSSIFQRLSMIATEGESQHPTSGSTRPSAFQRLSMAFEEKESVCSTPTTRLSAFQRLSVATKRSK

A0A5A7V4F2 Reverse transcriptase domain-containing protein4.6e-4241.16Show/hide
Query:  FKNTKE--KASPEGKMGRKTSQKSKVSLSQTKAEVAKNEKVLCSEEKKTNAPVLRYVPLSRRKKGDSPFAECSNNLRVGDIEILKESFITPLTKISKQE-
        FKN +E   +    K     SQ++  S ++TK    + EK+   +++ +N PVLRY+PLSRRKKG+SPFAECS N  V + EILKE+F  PLTKI K E 
Subjt:  FKNTKE--KASPEGKMGRKTSQKSKVSLSQTKAEVAKNEKVLCSEEKKTNAPVLRYVPLSRRKKGDSPFAECSNNLRVGDIEILKESFITPLTKISKQE-

Query:  ----------------------------------------------------------KKLQKAGYAIPISRAGLGYKSPEPVRITRKGKTKVADTLHIT
                                                                  KKLQK GY+IP SRAG+GY+S EP+RIT KGK KV +T HIT
Subjt:  ----------------------------------------------------------KKLQKAGYAIPISRAGLGYKSPEPVRITRKGKTKVADTLHIT

Query:  VEEIDDSEEAKENIDHRISAFDRIGPSVTRSSIFQRLSMIATEGESQHPTSGSTRPSAFQRLSMAFEEKESVCSTPTTRLSAFQRLSVATKRSK
        VEE  DS+E K++   R S FDRI  S  R S+FQR+S    +  +Q  T  STR SAFQRL+   +  +S+  T TTR SAF+RLSV+  + +
Subjt:  VEEIDDSEEAKENIDHRISAFDRIGPSVTRSSIFQRLSMIATEGESQHPTSGSTRPSAFQRLSMAFEEKESVCSTPTTRLSAFQRLSVATKRSK

A0A5D3BTY1 Ribonuclease H3.5e-4241.16Show/hide
Query:  FKNTKE--KASPEGKMGRKTSQKSKVSLSQTKAEVAKNEKVLCSEEKKTNAPVLRYVPLSRRKKGDSPFAECSNNLRVGDIEILKESFITPLTKISKQE-
        FKN +E   +    K     SQ++  S ++TK    + EK+   +++ +N PVLRY+PLSRRKKG+SPFAECS N  V + EILKE+F  PLTKI K E 
Subjt:  FKNTKE--KASPEGKMGRKTSQKSKVSLSQTKAEVAKNEKVLCSEEKKTNAPVLRYVPLSRRKKGDSPFAECSNNLRVGDIEILKESFITPLTKISKQE-

Query:  ----------------------------------------------------------KKLQKAGYAIPISRAGLGYKSPEPVRITRKGKTKVADTLHIT
                                                                  KKLQK GY+IP SRAG+GY+S EP+RIT KGK KV +T HIT
Subjt:  ----------------------------------------------------------KKLQKAGYAIPISRAGLGYKSPEPVRITRKGKTKVADTLHIT

Query:  VEEIDDSEEAKENIDHRISAFDRIGPSVTRSSIFQRLSMIATEGESQHPTSGSTRPSAFQRLSMAFEEKESVCSTPTTRLSAFQRLSVATKRSK
        VEE  DS+E K++   R S FDRI  S  R S+FQR+S    +  +Q  T  STR SAFQRL+   ++ +S+  T TTR SAF+RLSV   + +
Subjt:  VEEIDDSEEAKENIDHRISAFDRIGPSVTRSSIFQRLSMIATEGESQHPTSGSTRPSAFQRLSMAFEEKESVCSTPTTRLSAFQRLSVATKRSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAGCGTCGCGATGCTGTCGCGATACCGCGAATCTGGAAAATTTGTCGAGAGCGTCGCGACGCTGAGAGGAAGCTTAATCCAATTTGGTACCTTCGATCCTATTAT
CGTTTGGTCTCAACCAGAGGCCCCAGGAAATGACTTCCCAGAAAGGGCTCTCTACGATGAGGATCTTCAAGAAAAGATTAGGCAAATTGAAGACGTAGATGGAGGCTGGA
CACTCGTAACCCGACAGAAGAACCAAAGCAAAATTGGGTTCAGAAGAAATCTCGCTTGTTTCAAGAACACAAAAGAAAAAGCAAGTCCCGAAGGAAAAATGGGAAGAAAA
ACTTCTCAGAAAAGCAAGGTATCTCTAAGCCAAACAAAAGCTGAAGTGGCGAAAAATGAGAAGGTACTATGTTCAGAAGAGAAGAAGACAAACGCTCCTGTCTTGCGCTA
TGTTCCCTTATCTCGACGCAAGAAGGGTGATTCGCCATTTGCAGAATGCTCCAATAATTTAAGAGTTGGCGACATTGAAATTTTGAAAGAGAGTTTTATCACACCTCTTA
CAAAGATATCCAAACAAGAGAAAAAGCTTCAAAAAGCGGGATATGCTATACCCATTTCAAGAGCTGGTCTTGGATATAAATCTCCTGAGCCGGTTCGAATCACAAGAAAA
GGGAAAACGAAAGTTGCAGATACGCTTCACATTACAGTGGAAGAAATCGATGATTCCGAAGAAGCTAAAGAAAACATAGATCATAGAATTTCTGCATTTGATCGCATTGG
ACCGTCTGTTACACGGTCTTCAATTTTTCAAAGGCTGAGTATGATTGCAACAGAAGGCGAAAGTCAGCATCCAACTTCTGGCTCCACACGACCTTCAGCTTTCCAAAGGT
TAAGTATGGCTTTTGAAGAAAAAGAAAGTGTGTGTTCAACTCCTACCACACGACTATCAGCTTTCCAAAGGTTGAGTGTAGCCACAAAAAGAAGTAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGACAGCGTCGCGATGCTGTCGCGATACCGCGAATCTGGAAAATTTGTCGAGAGCGTCGCGACGCTGAGAGGAAGCTTAATCCAATTTGGTACCTTCGATCCTATTAT
CGTTTGGTCTCAACCAGAGGCCCCAGGAAATGACTTCCCAGAAAGGGCTCTCTACGATGAGGATCTTCAAGAAAAGATTAGGCAAATTGAAGACGTAGATGGAGGCTGGA
CACTCGTAACCCGACAGAAGAACCAAAGCAAAATTGGGTTCAGAAGAAATCTCGCTTGTTTCAAGAACACAAAAGAAAAAGCAAGTCCCGAAGGAAAAATGGGAAGAAAA
ACTTCTCAGAAAAGCAAGGTATCTCTAAGCCAAACAAAAGCTGAAGTGGCGAAAAATGAGAAGGTACTATGTTCAGAAGAGAAGAAGACAAACGCTCCTGTCTTGCGCTA
TGTTCCCTTATCTCGACGCAAGAAGGGTGATTCGCCATTTGCAGAATGCTCCAATAATTTAAGAGTTGGCGACATTGAAATTTTGAAAGAGAGTTTTATCACACCTCTTA
CAAAGATATCCAAACAAGAGAAAAAGCTTCAAAAAGCGGGATATGCTATACCCATTTCAAGAGCTGGTCTTGGATATAAATCTCCTGAGCCGGTTCGAATCACAAGAAAA
GGGAAAACGAAAGTTGCAGATACGCTTCACATTACAGTGGAAGAAATCGATGATTCCGAAGAAGCTAAAGAAAACATAGATCATAGAATTTCTGCATTTGATCGCATTGG
ACCGTCTGTTACACGGTCTTCAATTTTTCAAAGGCTGAGTATGATTGCAACAGAAGGCGAAAGTCAGCATCCAACTTCTGGCTCCACACGACCTTCAGCTTTCCAAAGGT
TAAGTATGGCTTTTGAAGAAAAAGAAAGTGTGTGTTCAACTCCTACCACACGACTATCAGCTTTCCAAAGGTTGAGTGTAGCCACAAAAAGAAGTAAATAA
Protein sequenceShow/hide protein sequence
MDSVAMLSRYRESGKFVESVATLRGSLIQFGTFDPIIVWSQPEAPGNDFPERALYDEDLQEKIRQIEDVDGGWTLVTRQKNQSKIGFRRNLACFKNTKEKASPEGKMGRK
TSQKSKVSLSQTKAEVAKNEKVLCSEEKKTNAPVLRYVPLSRRKKGDSPFAECSNNLRVGDIEILKESFITPLTKISKQEKKLQKAGYAIPISRAGLGYKSPEPVRITRK
GKTKVADTLHITVEEIDDSEEAKENIDHRISAFDRIGPSVTRSSIFQRLSMIATEGESQHPTSGSTRPSAFQRLSMAFEEKESVCSTPTTRLSAFQRLSVATKRSK