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Spg010935 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg010935
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionF-box protein CPR30-like
Genome locationscaffold10:7748725..7749372
RNA-Seq ExpressionSpg010935
SyntenySpg010935
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022159408.1 F-box/kelch-repeat protein At3g23880-like [Momordica charantia]3.2e-3044.64Show/hide
Query:  MVEILSRLPLESLLRFNCVAKSWYALINHSKFV---------GFLRILLKRTLTNKETGKKETRFSFLKYPLTADDHTSVEVEDDDFPCFGGGIS--EFR
        M+EILSRLP ESL+RF CV KSWYALIN+  F              +LLKR +T +E+G K+  F+FLK+PL   DH S  V D D P F       EFR
Subjt:  MVEILSRLPLESLLRFNCVAKSWYALINHSKFV---------GFLRILLKRTLTNKETGKKETRFSFLKYPLTADDHTSVEVEDDDFPCFGGGIS--EFR

Query:  NP------LSFSRLSLHLPFPQRPFSSSIRRPESSASSRRRFFSSLKSPIRSKNSIRSPT-PLDSGTIQNLRDFEVVRVVDFMEPPSNFHPSRAEVYDLG
                LS  R  + L     P +   R+   S          L  P    +   S T  +  G     RDF+VVRVV+F+E P  FHP R EVYDLG
Subjt:  NP------LSFSRLSLHLPFPQRPFSSSIRRPESSASSRRRFFSSLKSPIRSKNSIRSPT-PLDSGTIQNLRDFEVVRVVDFMEPPSNFHPSRAEVYDLG

Query:  KDRWREIETPVRGHAWWGPSFQMY
        KDRWREI+TPV GH +W PSF MY
Subjt:  KDRWREIETPVRGHAWWGPSFQMY

XP_022935692.1 F-box protein CPR30-like [Cucurbita moschata]1.9e-3044.39Show/hide
Query:  MVEILSRLPLESLLRFNCVAKSWYALINHSKF--------VGFLRILLKRTLTNKETGKKETRFSFLKYPLTADDHTSVEVEDDDFPCFGGGISEFR-NP
        M+EILSRLP ESLLRF  V KSWYALIN+ KF        +    +LLKR +T K +GKKE  FSFLK+PL  D   SV V D D P F      F    
Subjt:  MVEILSRLPLESLLRFNCVAKSWYALINHSKF--------VGFLRILLKRTLTNKETGKKETRFSFLKYPLTADDHTSVEVEDDDFPCFGGGISEFR-NP

Query:  LSFSRLSLHLPFPQRPFSSSIRRPESSASSRRRFFSSL--------KSPIRSKNSIRSPTPLDSGTIQNLRDFEVVRVVDFMEPPSNFHPSRAEVYDLGK
         S   L L          + +RR     +   R F  L        + P        S   +  G     RDF+VVRVV+F+E P  FHP R E+YDL K
Subjt:  LSFSRLSLHLPFPQRPFSSSIRRPESSASSRRRFFSSL--------KSPIRSKNSIRSPTPLDSGTIQNLRDFEVVRVVDFMEPPSNFHPSRAEVYDLGK

Query:  DRWREIETPVRGHAWWGPSFQMY
        DRWREIETP+ GH +W PSF+MY
Subjt:  DRWREIETPVRGHAWWGPSFQMY

XP_022983805.1 F-box protein CPR1-like [Cucurbita maxima]3.2e-3043.95Show/hide
Query:  MVEILSRLPLESLLRFNCVAKSWYALINHSKF--------VGFLRILLKRTLTNKETGKKETRFSFLKYPLTADDHTSVEVEDDDFPCFGGGISEFR-NP
        M+EILSRLP ESLLRF  V KSWYALI++ KF        +    +LLKR +T K +GKKE  FSFLK+PL  D   SV V D D+P F      F    
Subjt:  MVEILSRLPLESLLRFNCVAKSWYALINHSKF--------VGFLRILLKRTLTNKETGKKETRFSFLKYPLTADDHTSVEVEDDDFPCFGGGISEFR-NP

Query:  LSFSRLSLHLPFPQRPFSSSIRRPESSASSRRRFFSSL--------KSPIRSKNSIRSPTPLDSGTIQNLRDFEVVRVVDFMEPPSNFHPSRAEVYDLGK
         S   L L          + +RR     +   R F  L        + P        S   +  G     +DF+VVRVV+F+E P  FHP RAE+YDL K
Subjt:  LSFSRLSLHLPFPQRPFSSSIRRPESSASSRRRFFSSL--------KSPIRSKNSIRSPTPLDSGTIQNLRDFEVVRVVDFMEPPSNFHPSRAEVYDLGK

Query:  DRWREIETPVRGHAWWGPSFQMY
        DRWREIETP+ GH +W PSF+MY
Subjt:  DRWREIETPVRGHAWWGPSFQMY

XP_023526117.1 F-box protein CPR1-like [Cucurbita pepo subsp. pepo]3.6e-2943.95Show/hide
Query:  MVEILSRLPLESLLRFNCVAKSWYALINHSKF--------VGFLRILLKRTLTNKETGKKETRFSFLKYPLTADDHTSVEVEDDDFPCFGGGISEFR-NP
        M+EILSRLP ESLLRF  V KSWYALI++ KF        +    +LLKR +T K +GKKE  FSFLK+PL  D   SV V D D P F      F    
Subjt:  MVEILSRLPLESLLRFNCVAKSWYALINHSKF--------VGFLRILLKRTLTNKETGKKETRFSFLKYPLTADDHTSVEVEDDDFPCFGGGISEFR-NP

Query:  LSFSRLSLHLPFPQRPFSSSIRRPESSASSRRRFFSSL--------KSPIRSKNSIRSPTPLDSGTIQNLRDFEVVRVVDFMEPPSNFHPSRAEVYDLGK
         S   L L          + +RR     +   R F  L        K P        S   +  G     RDF+VVRVV+F+E P  FH  R E+YDL K
Subjt:  LSFSRLSLHLPFPQRPFSSSIRRPESSASSRRRFFSSL--------KSPIRSKNSIRSPTPLDSGTIQNLRDFEVVRVVDFMEPPSNFHPSRAEVYDLGK

Query:  DRWREIETPVRGHAWWGPSFQMY
        DRWREIETP+ GH +W PSF+MY
Subjt:  DRWREIETPVRGHAWWGPSFQMY

XP_038906036.1 F-box protein CPR1-like [Benincasa hispida]6.5e-3143.69Show/hide
Query:  MVEILSRLPLESLLRFNCVAKSWYALINHSKF--------VGFLRILLKRTLTNKETGKKETRFSFLKYPLTADDHTSVEVEDDDFPCFGGGISEFRNPL
        M+EILSRLP ESLLRF CV KSWYALIN  KF        +   ++LLKR +T K +G KE  FSFLK PL+ D   SV V D D P        F    
Subjt:  MVEILSRLPLESLLRFNCVAKSWYALINHSKF--------VGFLRILLKRTLTNKETGKKETRFSFLKYPLTADDHTSVEVEDDDFPCFGGGISEFRNPL

Query:  SFSRLSLHLPFPQRPFSSSIRRPESSASSRRRFFSSL--------KSPIRSKNSIRSPTPLDSGTIQNLRDFEVVRVVDFMEPPSNFHPSRAEVYDLGKD
         F    +H         + +R+     +   R F  L        + P        S   +  G     RDF+VVRVVDF+E P  FHP R E+YDL KD
Subjt:  SFSRLSLHLPFPQRPFSSSIRRPESSASSRRRFFSSL--------KSPIRSKNSIRSPTPLDSGTIQNLRDFEVVRVVDFMEPPSNFHPSRAEVYDLGKD

Query:  RWREIETPVRGHAWWGPSFQMY
        RWREIETPV GH +W P F+MY
Subjt:  RWREIETPVRGHAWWGPSFQMY

TrEMBL top hitse value%identityAlignment
A0A5A7UHP3 F-box protein CPR30-like5.6e-2840.54Show/hide
Query:  MVEILSRLPLESLLRFNCVAKSWYALINHSKF--------VGFLRILLKRTLTNKETGKKETRFSFLKYPLTADDHTSVEVEDDDFPCFGGGISEFRNPL
        ++EILSRLP ESLLRF CV KSWYAL N  KF        +    +LLKR +T K++GKKE  FS LK PL+   H+S+ + D D P        F    
Subjt:  MVEILSRLPLESLLRFNCVAKSWYALINHSKF--------VGFLRILLKRTLTNKETGKKETRFSFLKYPLTADDHTSVEVEDDDFPCFGGGISEFRNPL

Query:  SFSRLSLHLPFPQRPFSSSIRRPESSAS-SRRRFFSSLKSPIRSKNSIRSPTPLDSGT-------IQNLRDFEVVRVVDFMEPPSNFHPSRAEVYDLGKD
         F    +H         + +R+     + S R F     S +        P   DS T           RDF+VVRVVDF+E P  F+P + EVYDL K+
Subjt:  SFSRLSLHLPFPQRPFSSSIRRPESSAS-SRRRFFSSLKSPIRSKNSIRSPTPLDSGT-------IQNLRDFEVVRVVDFMEPPSNFHPSRAEVYDLGKD

Query:  RWREIETPVRGHAWWGPSFQMY
        RWREI+TPV GH +W P F+++
Subjt:  RWREIETPVRGHAWWGPSFQMY

A0A5D3DPN6 F-box protein CPR30-like5.6e-2840.54Show/hide
Query:  MVEILSRLPLESLLRFNCVAKSWYALINHSKF--------VGFLRILLKRTLTNKETGKKETRFSFLKYPLTADDHTSVEVEDDDFPCFGGGISEFRNPL
        ++EILSRLP ESLLRF CV KSWYAL N  KF        +    +LLKR +T K++GKKE  FS LK PL+   H+S+ + D D P        F    
Subjt:  MVEILSRLPLESLLRFNCVAKSWYALINHSKF--------VGFLRILLKRTLTNKETGKKETRFSFLKYPLTADDHTSVEVEDDDFPCFGGGISEFRNPL

Query:  SFSRLSLHLPFPQRPFSSSIRRPESSAS-SRRRFFSSLKSPIRSKNSIRSPTPLDSGT-------IQNLRDFEVVRVVDFMEPPSNFHPSRAEVYDLGKD
         F    +H         + +R+     + S R F     S +        P   DS T           RDF+VVRVVDF+E P  F+P + EVYDL K+
Subjt:  SFSRLSLHLPFPQRPFSSSIRRPESSAS-SRRRFFSSLKSPIRSKNSIRSPTPLDSGT-------IQNLRDFEVVRVVDFMEPPSNFHPSRAEVYDLGKD

Query:  RWREIETPVRGHAWWGPSFQMY
        RWREI+TPV GH +W P F+++
Subjt:  RWREIETPVRGHAWWGPSFQMY

A0A6J1DYQ4 F-box/kelch-repeat protein At3g23880-like1.6e-3044.64Show/hide
Query:  MVEILSRLPLESLLRFNCVAKSWYALINHSKFV---------GFLRILLKRTLTNKETGKKETRFSFLKYPLTADDHTSVEVEDDDFPCFGGGIS--EFR
        M+EILSRLP ESL+RF CV KSWYALIN+  F              +LLKR +T +E+G K+  F+FLK+PL   DH S  V D D P F       EFR
Subjt:  MVEILSRLPLESLLRFNCVAKSWYALINHSKFV---------GFLRILLKRTLTNKETGKKETRFSFLKYPLTADDHTSVEVEDDDFPCFGGGIS--EFR

Query:  NP------LSFSRLSLHLPFPQRPFSSSIRRPESSASSRRRFFSSLKSPIRSKNSIRSPT-PLDSGTIQNLRDFEVVRVVDFMEPPSNFHPSRAEVYDLG
                LS  R  + L     P +   R+   S          L  P    +   S T  +  G     RDF+VVRVV+F+E P  FHP R EVYDLG
Subjt:  NP------LSFSRLSLHLPFPQRPFSSSIRRPESSASSRRRFFSSLKSPIRSKNSIRSPT-PLDSGTIQNLRDFEVVRVVDFMEPPSNFHPSRAEVYDLG

Query:  KDRWREIETPVRGHAWWGPSFQMY
        KDRWREI+TPV GH +W PSF MY
Subjt:  KDRWREIETPVRGHAWWGPSFQMY

A0A6J1F6B1 F-box protein CPR30-like9.2e-3144.39Show/hide
Query:  MVEILSRLPLESLLRFNCVAKSWYALINHSKF--------VGFLRILLKRTLTNKETGKKETRFSFLKYPLTADDHTSVEVEDDDFPCFGGGISEFR-NP
        M+EILSRLP ESLLRF  V KSWYALIN+ KF        +    +LLKR +T K +GKKE  FSFLK+PL  D   SV V D D P F      F    
Subjt:  MVEILSRLPLESLLRFNCVAKSWYALINHSKF--------VGFLRILLKRTLTNKETGKKETRFSFLKYPLTADDHTSVEVEDDDFPCFGGGISEFR-NP

Query:  LSFSRLSLHLPFPQRPFSSSIRRPESSASSRRRFFSSL--------KSPIRSKNSIRSPTPLDSGTIQNLRDFEVVRVVDFMEPPSNFHPSRAEVYDLGK
         S   L L          + +RR     +   R F  L        + P        S   +  G     RDF+VVRVV+F+E P  FHP R E+YDL K
Subjt:  LSFSRLSLHLPFPQRPFSSSIRRPESSASSRRRFFSSL--------KSPIRSKNSIRSPTPLDSGTIQNLRDFEVVRVVDFMEPPSNFHPSRAEVYDLGK

Query:  DRWREIETPVRGHAWWGPSFQMY
        DRWREIETP+ GH +W PSF+MY
Subjt:  DRWREIETPVRGHAWWGPSFQMY

A0A6J1J6Y5 F-box protein CPR1-like1.6e-3043.95Show/hide
Query:  MVEILSRLPLESLLRFNCVAKSWYALINHSKF--------VGFLRILLKRTLTNKETGKKETRFSFLKYPLTADDHTSVEVEDDDFPCFGGGISEFR-NP
        M+EILSRLP ESLLRF  V KSWYALI++ KF        +    +LLKR +T K +GKKE  FSFLK+PL  D   SV V D D+P F      F    
Subjt:  MVEILSRLPLESLLRFNCVAKSWYALINHSKF--------VGFLRILLKRTLTNKETGKKETRFSFLKYPLTADDHTSVEVEDDDFPCFGGGISEFR-NP

Query:  LSFSRLSLHLPFPQRPFSSSIRRPESSASSRRRFFSSL--------KSPIRSKNSIRSPTPLDSGTIQNLRDFEVVRVVDFMEPPSNFHPSRAEVYDLGK
         S   L L          + +RR     +   R F  L        + P        S   +  G     +DF+VVRVV+F+E P  FHP RAE+YDL K
Subjt:  LSFSRLSLHLPFPQRPFSSSIRRPESSASSRRRFFSSL--------KSPIRSKNSIRSPTPLDSGTIQNLRDFEVVRVVDFMEPPSNFHPSRAEVYDLGK

Query:  DRWREIETPVRGHAWWGPSFQMY
        DRWREIETP+ GH +W PSF+MY
Subjt:  DRWREIETPVRGHAWWGPSFQMY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30790.1 F-box and associated interaction domains-containing protein9.4e-0450Show/hide
Query:  VEILSRLPLESLLRFNCVAKSWYALINHSKFV
        VEIL+RLP +SL++F CV+K W ++I++  F+
Subjt:  VEILSRLPLESLLRFNCVAKSWYALINHSKFV

AT1G32420.1 F-box and associated interaction domains-containing protein9.4e-0445.45Show/hide
Query:  VEILSRLPLESLLRFNCVAKSWYALINHSKFVGFLRILLKRTLT
        VEIL +LP +SLLRF CV+K W ++I+  +   F+  ++ R+LT
Subjt:  VEILSRLPLESLLRFNCVAKSWYALINHSKFVGFLRILLKRTLT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCGAGATTCTATCACGGTTGCCGCTGGAGTCTCTGCTTCGATTCAATTGCGTTGCGAAATCCTGGTACGCCCTCATTAACCACTCTAAATTCGTCGGTTTTCTTCG
GATTTTACTGAAGCGTACCTTGACGAACAAGGAGACTGGGAAGAAAGAAACGAGATTCTCGTTCTTGAAATATCCCCTCACAGCCGATGATCATACATCCGTTGAGGTTG
AGGACGACGATTTTCCATGTTTTGGTGGGGGAATTTCAGAATTCCGAAATCCATTGTCATTCTCACGGCTTAGTTTGCATCTTCCTTTCCCCCAGCGACCATTTTCCTCT
TCAATCCGGCGACCAGAGAGCTCCGCGAGCTCCCGCCGTCGATTCTTCTCATCACTGAAATCACCGATCCGTTCGAAGAACTCGATTCGCTCACCAACGCCGTTGGATTC
GGGTACGATCCAAAATCTACGAGATTTCGAGGTCGTTAGGGTTGTGGATTTTATGGAACCGCCTTCCAATTTTCACCCTTCTAGAGCCGAAGTGTACGATTTGGGGAAAG
ATCGATGGAGAGAAATCGAAACCCCTGTTCGTGGTCATGCTTGGTGGGGTCCTTCCTTTCAGATGTATTCTATTATTGGTGGGCCGAAGCTAAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCGAGATTCTATCACGGTTGCCGCTGGAGTCTCTGCTTCGATTCAATTGCGTTGCGAAATCCTGGTACGCCCTCATTAACCACTCTAAATTCGTCGGTTTTCTTCG
GATTTTACTGAAGCGTACCTTGACGAACAAGGAGACTGGGAAGAAAGAAACGAGATTCTCGTTCTTGAAATATCCCCTCACAGCCGATGATCATACATCCGTTGAGGTTG
AGGACGACGATTTTCCATGTTTTGGTGGGGGAATTTCAGAATTCCGAAATCCATTGTCATTCTCACGGCTTAGTTTGCATCTTCCTTTCCCCCAGCGACCATTTTCCTCT
TCAATCCGGCGACCAGAGAGCTCCGCGAGCTCCCGCCGTCGATTCTTCTCATCACTGAAATCACCGATCCGTTCGAAGAACTCGATTCGCTCACCAACGCCGTTGGATTC
GGGTACGATCCAAAATCTACGAGATTTCGAGGTCGTTAGGGTTGTGGATTTTATGGAACCGCCTTCCAATTTTCACCCTTCTAGAGCCGAAGTGTACGATTTGGGGAAAG
ATCGATGGAGAGAAATCGAAACCCCTGTTCGTGGTCATGCTTGGTGGGGTCCTTCCTTTCAGATGTATTCTATTATTGGTGGGCCGAAGCTAAAGTAG
Protein sequenceShow/hide protein sequence
MVEILSRLPLESLLRFNCVAKSWYALINHSKFVGFLRILLKRTLTNKETGKKETRFSFLKYPLTADDHTSVEVEDDDFPCFGGGISEFRNPLSFSRLSLHLPFPQRPFSS
SIRRPESSASSRRRFFSSLKSPIRSKNSIRSPTPLDSGTIQNLRDFEVVRVVDFMEPPSNFHPSRAEVYDLGKDRWREIETPVRGHAWWGPSFQMYSIIGGPKLK