; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg010963 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg010963
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotransposon gag protein
Genome locationscaffold4:29587389..29590358
RNA-Seq ExpressionSpg010963
SyntenySpg010963
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036008.1 Retrotransposon gag protein [Cucumis melo var. makuwa]1.8e-2065.91Show/hide
Query:  EEENQCSVSTSARPSAFQRLSVSTSKKSQPSTSVFDRLEVTSDQPKRKMDNLELKLFDEVNNDEKLHSNIPSRMKRKFSVLINTEGSL
        EEENQC +ST AR SAF+RLS+STSKK +PSTS FDRL++T+DQ +R+M + + K F E N+D+K+HS +PSRMKRK SV INTEGSL
Subjt:  EEENQCSVSTSARPSAFQRLSVSTSKKSQPSTSVFDRLEVTSDQPKRKMDNLELKLFDEVNNDEKLHSNIPSRMKRKFSVLINTEGSL

KAA0044978.1 retrotransposon gag protein [Cucumis melo var. makuwa]8.1e-2167.05Show/hide
Query:  EEENQCSVSTSARPSAFQRLSVSTSKKSQPSTSVFDRLEVTSDQPKRKMDNLELKLFDEVNNDEKLHSNIPSRMKRKFSVLINTEGSL
        EEENQC  ST AR SAF+RLS+STSKK +PSTS FDRL++T+DQ +R+M +L+ K F E N+D+K+HS +PSRMKRK SV INTEGSL
Subjt:  EEENQCSVSTSARPSAFQRLSVSTSKKSQPSTSVFDRLEVTSDQPKRKMDNLELKLFDEVNNDEKLHSNIPSRMKRKFSVLINTEGSL

KAA0050734.1 gag protease polyprotein [Cucumis melo var. makuwa]1.1e-2067.05Show/hide
Query:  EEENQCSVSTSARPSAFQRLSVSTSKKSQPSTSVFDRLEVTSDQPKRKMDNLELKLFDEVNNDEKLHSNIPSRMKRKFSVLINTEGSL
        EEENQC  ST AR SAF+RLS+STSKK +PSTS FDRL++T+DQ +R+M +L+ K F E N D+K+HS +PSRMKRK SV INTEGSL
Subjt:  EEENQCSVSTSARPSAFQRLSVSTSKKSQPSTSVFDRLEVTSDQPKRKMDNLELKLFDEVNNDEKLHSNIPSRMKRKFSVLINTEGSL

TYK08944.1 retrotransposon gag protein [Cucumis melo var. makuwa]5.2e-2064.77Show/hide
Query:  EEENQCSVSTSARPSAFQRLSVSTSKKSQPSTSVFDRLEVTSDQPKRKMDNLELKLFDEVNNDEKLHSNIPSRMKRKFSVLINTEGSL
        EE+NQC  ST AR SAF+RLS+STSKK +PSTS FDRL++T+DQ +R+M +L+ K F E N+D+K+H+ +PSRMKRK SV INTEGSL
Subjt:  EEENQCSVSTSARPSAFQRLSVSTSKKSQPSTSVFDRLEVTSDQPKRKMDNLELKLFDEVNNDEKLHSNIPSRMKRKFSVLINTEGSL

TYK18884.1 gag protease polyprotein [Cucumis melo var. makuwa]3.1e-2064.77Show/hide
Query:  EEENQCSVSTSARPSAFQRLSVSTSKKSQPSTSVFDRLEVTSDQPKRKMDNLELKLFDEVNNDEKLHSNIPSRMKRKFSVLINTEGSL
        EEENQC  ST AR SAF+RLS+STSKK +PSTS FDRL++T+DQ +R+M +L+ K F E N+D+K+HS +PSRMKRK S+ INT+GSL
Subjt:  EEENQCSVSTSARPSAFQRLSVSTSKKSQPSTSVFDRLEVTSDQPKRKMDNLELKLFDEVNNDEKLHSNIPSRMKRKFSVLINTEGSL

TrEMBL top hitse value%identityAlignment
A0A5A7SZJ7 Retrotransposon gag protein8.7e-2165.91Show/hide
Query:  EEENQCSVSTSARPSAFQRLSVSTSKKSQPSTSVFDRLEVTSDQPKRKMDNLELKLFDEVNNDEKLHSNIPSRMKRKFSVLINTEGSL
        EEENQC +ST AR SAF+RLS+STSKK +PSTS FDRL++T+DQ +R+M + + K F E N+D+K+HS +PSRMKRK SV INTEGSL
Subjt:  EEENQCSVSTSARPSAFQRLSVSTSKKSQPSTSVFDRLEVTSDQPKRKMDNLELKLFDEVNNDEKLHSNIPSRMKRKFSVLINTEGSL

A0A5A7TQ06 Retrotransposon gag protein3.9e-2167.05Show/hide
Query:  EEENQCSVSTSARPSAFQRLSVSTSKKSQPSTSVFDRLEVTSDQPKRKMDNLELKLFDEVNNDEKLHSNIPSRMKRKFSVLINTEGSL
        EEENQC  ST AR SAF+RLS+STSKK +PSTS FDRL++T+DQ +R+M +L+ K F E N+D+K+HS +PSRMKRK SV INTEGSL
Subjt:  EEENQCSVSTSARPSAFQRLSVSTSKKSQPSTSVFDRLEVTSDQPKRKMDNLELKLFDEVNNDEKLHSNIPSRMKRKFSVLINTEGSL

A0A5A7UI09 Retrotransposon gag protein2.5e-2064.77Show/hide
Query:  EEENQCSVSTSARPSAFQRLSVSTSKKSQPSTSVFDRLEVTSDQPKRKMDNLELKLFDEVNNDEKLHSNIPSRMKRKFSVLINTEGSL
        EE+NQC  ST AR SAF+RLS+STSKK +PSTS FDRL++T+DQ +R+M +L+ K F E N+D+K+H+ +PSRMKRK SV INTEGSL
Subjt:  EEENQCSVSTSARPSAFQRLSVSTSKKSQPSTSVFDRLEVTSDQPKRKMDNLELKLFDEVNNDEKLHSNIPSRMKRKFSVLINTEGSL

A0A5D3BBF9 Gag protease polyprotein5.1e-2167.05Show/hide
Query:  EEENQCSVSTSARPSAFQRLSVSTSKKSQPSTSVFDRLEVTSDQPKRKMDNLELKLFDEVNNDEKLHSNIPSRMKRKFSVLINTEGSL
        EEENQC  ST AR SAF+RLS+STSKK +PSTS FDRL++T+DQ +R+M +L+ K F E N D+K+HS +PSRMKRK SV INTEGSL
Subjt:  EEENQCSVSTSARPSAFQRLSVSTSKKSQPSTSVFDRLEVTSDQPKRKMDNLELKLFDEVNNDEKLHSNIPSRMKRKFSVLINTEGSL

A0A5D3D5Q0 Gag protease polyprotein1.5e-2064.77Show/hide
Query:  EEENQCSVSTSARPSAFQRLSVSTSKKSQPSTSVFDRLEVTSDQPKRKMDNLELKLFDEVNNDEKLHSNIPSRMKRKFSVLINTEGSL
        EEENQC  ST AR SAF+RLS+STSKK +PSTS FDRL++T+DQ +R+M +L+ K F E N+D+K+HS +PSRMKRK S+ INT+GSL
Subjt:  EEENQCSVSTSARPSAFQRLSVSTSKKSQPSTSVFDRLEVTSDQPKRKMDNLELKLFDEVNNDEKLHSNIPSRMKRKFSVLINTEGSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAACTCTTACACGGGTTCTACTACCCATTGTTGCTTCAATGAAATGAGGTTGCAAGAAGATAAAGCTCCTATCATTGCAAGCGGTGAAATAACATTGCAGGGGAC
ATGTACTGATGGCAAGTTTCTTGTGAAGTATAACCCCTTGTTCGAGCCTGATTCTGACATAGTGACTGTCATGATGACTGAGACAAGAACTACGGAAGAAAGAATGGCTG
AGATGCAGGAACACATCAACACCTTGATGAAGGCGATTGAAGAAAAAGATTCTCAAATCGCTCAACTAAAGAGCCAAATTGAGAACCAACATATCGCCGAATCAAGTCAA
ACCCAAGACCTCCCTCTTCGATCGCATCAAGCCTCCAACTACTCGTCCTTCAGTATTCCAAAGAATGAGTATGGTCGCGCAGAAGAAGAAAATCAATGTTCGGTGTCCAC
CTCCGCTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCCAAGAAAAGTCAACCTTCGACATCTGTTTTTGATCGCCTCGAAGTAACAAGCGATCAACCTAAAA
GAAAGATGGACAACTTGGAGTTGAAACTTTTCGATGAAGTAAACAACGACGAGAAGCTTCATAGTAATATCCCGTCACGTATGAAGAGGAAGTTTTCTGTTCTCATAAAT
ACGGAAGGTTCCTTGAAGTTCGTTGTTCCCGCTTCTTCGAGTTCGAAGGTTCTCACGCACTTCGCTGCAGTTCATTCTCTCAAGTTTGAAGGTTCTCACGCTGCTTCACT
GCAGTTCCTTCTCTCCAAGTTCGAAGATTCTCATGCGCTTCGTTGCAGTCCCTTCTGTTCAAGTACGAAGGTTCACACGTTGCGCTGCTTCTTCGCTAAGTTCGAAGGTT
CACACGTTGCGCTGTTCCATCACCAAATTCGAAGGTTCCCACATTGTGCTGTTGTGCTGCTTCCTTCTCCAAGTTCGAAGGTTCTCACGTTGCGCTGCTTCCTTCACCAA
GTTCAAAGGTTCTCACGCTGCGCTGTTTCGCTGTTCCTTCTCCAAGTTCGAAGATTCTCATGCGCTTCGTTGCAGTTCCTTCTCTTCAAGTTCGAAGGTTCACACGTTGC
GCTGCTTCTTCGCCAAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACAACTCTTACACGGGTTCTACTACCCATTGTTGCTTCAATGAAATGAGGTTGCAAGAAGATAAAGCTCCTATCATTGCAAGCGGTGAAATAACATTGCAGGGGAC
ATGTACTGATGGCAAGTTTCTTGTGAAGTATAACCCCTTGTTCGAGCCTGATTCTGACATAGTGACTGTCATGATGACTGAGACAAGAACTACGGAAGAAAGAATGGCTG
AGATGCAGGAACACATCAACACCTTGATGAAGGCGATTGAAGAAAAAGATTCTCAAATCGCTCAACTAAAGAGCCAAATTGAGAACCAACATATCGCCGAATCAAGTCAA
ACCCAAGACCTCCCTCTTCGATCGCATCAAGCCTCCAACTACTCGTCCTTCAGTATTCCAAAGAATGAGTATGGTCGCGCAGAAGAAGAAAATCAATGTTCGGTGTCCAC
CTCCGCTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCCAAGAAAAGTCAACCTTCGACATCTGTTTTTGATCGCCTCGAAGTAACAAGCGATCAACCTAAAA
GAAAGATGGACAACTTGGAGTTGAAACTTTTCGATGAAGTAAACAACGACGAGAAGCTTCATAGTAATATCCCGTCACGTATGAAGAGGAAGTTTTCTGTTCTCATAAAT
ACGGAAGGTTCCTTGAAGTTCGTTGTTCCCGCTTCTTCGAGTTCGAAGGTTCTCACGCACTTCGCTGCAGTTCATTCTCTCAAGTTTGAAGGTTCTCACGCTGCTTCACT
GCAGTTCCTTCTCTCCAAGTTCGAAGATTCTCATGCGCTTCGTTGCAGTCCCTTCTGTTCAAGTACGAAGGTTCACACGTTGCGCTGCTTCTTCGCTAAGTTCGAAGGTT
CACACGTTGCGCTGTTCCATCACCAAATTCGAAGGTTCCCACATTGTGCTGTTGTGCTGCTTCCTTCTCCAAGTTCGAAGGTTCTCACGTTGCGCTGCTTCCTTCACCAA
GTTCAAAGGTTCTCACGCTGCGCTGTTTCGCTGTTCCTTCTCCAAGTTCGAAGATTCTCATGCGCTTCGTTGCAGTTCCTTCTCTTCAAGTTCGAAGGTTCACACGTTGC
GCTGCTTCTTCGCCAAGTTTGA
Protein sequenceShow/hide protein sequence
MNNSYTGSTTHCCFNEMRLQEDKAPIIASGEITLQGTCTDGKFLVKYNPLFEPDSDIVTVMMTETRTTEERMAEMQEHINTLMKAIEEKDSQIAQLKSQIENQHIAESSQ
TQDLPLRSHQASNYSSFSIPKNEYGRAEEENQCSVSTSARPSAFQRLSVSTSKKSQPSTSVFDRLEVTSDQPKRKMDNLELKLFDEVNNDEKLHSNIPSRMKRKFSVLIN
TEGSLKFVVPASSSSKVLTHFAAVHSLKFEGSHAASLQFLLSKFEDSHALRCSPFCSSTKVHTLRCFFAKFEGSHVALFHHQIRRFPHCAVVLLPSPSSKVLTLRCFLHQ
VQRFSRCAVSLFLLQVRRFSCASLQFLLFKFEGSHVALLLRQV