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Spg010995 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg010995
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionarabinogalactan peptide 22-like
Genome locationscaffold4:27806144..27806573
RNA-Seq ExpressionSpg010995
SyntenySpg010995
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600532.1 Arabinogalactan protein 20, partial [Cucurbita argyrosperma subsp. sororia]9.6e-0887.5Show/hide
Query:  MAVSRASFGFVAAGELVFAIFLPVARPQSLAPARAPTSDG
        MAVSRASFGFVAA  LVF IFLPVA+PQSLAPA APTSDG
Subjt:  MAVSRASFGFVAAGELVFAIFLPVARPQSLAPARAPTSDG
KAG7031172.1 Arabinogalactan peptide 20 [Cucurbita argyrosperma subsp. argyrosperma]9.6e-0887.5Show/hide
Query:  MAVSRASFGFVAAGELVFAIFLPVARPQSLAPARAPTSDG
        MAVSRASFGFVAA  LVF IFLPVA+PQSLAPA APTSDG
Subjt:  MAVSRASFGFVAAGELVFAIFLPVARPQSLAPARAPTSDG
XP_022931316.1 arabinogalactan peptide 22-like [Cucurbita moschata]1.3e-0785Show/hide
Query:  MAVSRASFGFVAAGELVFAIFLPVARPQSLAPARAPTSDG
        MAVSR SFGFVAA  L+FAIFLPVA+PQSLAPA APTSDG
Subjt:  MAVSRASFGFVAAGELVFAIFLPVARPQSLAPARAPTSDG
XP_022941572.1 arabinogalactan peptide 22-like [Cucurbita moschata]9.6e-0887.5Show/hide
Query:  MAVSRASFGFVAAGELVFAIFLPVARPQSLAPARAPTSDG
        MAVSRASFGFVAA  LVF IFLPVA+PQSLAPA APTSDG
Subjt:  MAVSRASFGFVAAGELVFAIFLPVARPQSLAPARAPTSDG
XP_023522233.1 arabinogalactan peptide 22-like [Cucurbita pepo subsp. pepo]9.6e-0887.5Show/hide
Query:  MAVSRASFGFVAAGELVFAIFLPVARPQSLAPARAPTSDG
        MAVSRASFGFVAA  LVF IFLPVA+PQSLAPA APTSDG
Subjt:  MAVSRASFGFVAAGELVFAIFLPVARPQSLAPARAPTSDG
TrEMBL top hitse value%identityAlignment
A0A0A0KZS8 Uncharacterized protein4.4e-0677.5Show/hide
Query:  MAVSRASFGFVAAGELVFAIFLPVARPQSLAPARAPTSDG
        MAVSR+SFG +AA  L+FAIFLPVA P SLAPA APTSDG
Subjt:  MAVSRASFGFVAAGELVFAIFLPVARPQSLAPARAPTSDG
A0A6J1C4C2 arabinogalactan peptide 22-like1.1e-0680Show/hide
Query:  MAVSRASFGFVAAGELVFAIFLPVARPQSLAPARAPTSDG
        MAVSRASFGFVAA  L+FAIFLPVA P SL PA AP+SDG
Subjt:  MAVSRASFGFVAAGELVFAIFLPVARPQSLAPARAPTSDG
A0A6J1ETC6 arabinogalactan peptide 22-like6.1e-0885Show/hide
Query:  MAVSRASFGFVAAGELVFAIFLPVARPQSLAPARAPTSDG
        MAVSR SFGFVAA  L+FAIFLPVA+PQSLAPA APTSDG
Subjt:  MAVSRASFGFVAAGELVFAIFLPVARPQSLAPARAPTSDG
A0A6J1FMT5 arabinogalactan peptide 22-like4.7e-0887.5Show/hide
Query:  MAVSRASFGFVAAGELVFAIFLPVARPQSLAPARAPTSDG
        MAVSRASFGFVAA  LVF IFLPVA+PQSLAPA APTSDG
Subjt:  MAVSRASFGFVAAGELVFAIFLPVARPQSLAPARAPTSDG
A0A6J1J4V7 arabinogalactan peptide 206.1e-0885Show/hide
Query:  MAVSRASFGFVAAGELVFAIFLPVARPQSLAPARAPTSDG
        MAVSR SFGFVAA  L+FAIFLPVA+PQSLAPA APTSDG
Subjt:  MAVSRASFGFVAAGELVFAIFLPVARPQSLAPARAPTSDG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G24105.1 arabinogalactan protein 415.3e-0455Show/hide
Query:  MAVSRASFGFVAAGELVFAIFLPVARPQSLAPARAPTSDG
        M+ SR  FG      ++FAI LP+A  QS APA APTSDG
Subjt:  MAVSRASFGFVAAGELVFAIFLPVARPQSLAPARAPTSDG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTTTCTAGGGCGTCTTTTGGATTCGTGGCTGCCGGCGAGCTCGTCTTCGCCATCTTCTTGCCGGTTGCTCGGCCTCAGTCCTTGGCTCCGGCACGCGCTCCCAC
CAGCGACGGTTGGTTCCATGAAACATCTTCCTCCTCATCGCAACGGCGACTCACAAATCGCGGTCCTCTCCTTCTCCGCCGCTTTGTTGACTTAACTTTTCATCATTCAA
CTGCTGTATTTCTCTTCGGCCGACGGTTAACCATGGACGTCGATCCTCGACACTACAACCACATCATTAGTAAAGCACTCGCTCATTTTTGTTCTGCTTTGTCGCCATTG
CTCGATTACTTTGTTTTTCCTTATCTTGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTTTCTAGGGCGTCTTTTGGATTCGTGGCTGCCGGCGAGCTCGTCTTCGCCATCTTCTTGCCGGTTGCTCGGCCTCAGTCCTTGGCTCCGGCACGCGCTCCCAC
CAGCGACGGTTGGTTCCATGAAACATCTTCCTCCTCATCGCAACGGCGACTCACAAATCGCGGTCCTCTCCTTCTCCGCCGCTTTGTTGACTTAACTTTTCATCATTCAA
CTGCTGTATTTCTCTTCGGCCGACGGTTAACCATGGACGTCGATCCTCGACACTACAACCACATCATTAGTAAAGCACTCGCTCATTTTTGTTCTGCTTTGTCGCCATTG
CTCGATTACTTTGTTTTTCCTTATCTTGATTAA
Protein sequenceShow/hide protein sequence
MAVSRASFGFVAAGELVFAIFLPVARPQSLAPARAPTSDGWFHETSSSSSQRRLTNRGPLLLRRFVDLTFHHSTAVFLFGRRLTMDVDPRHYNHIISKALAHFCSALSPL
LDYFVFPYLD