; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg011026 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg011026
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationscaffold4:25801647..25804907
RNA-Seq ExpressionSpg011026
SyntenySpg011026
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB53755.1 hypothetical protein L484_022412 [Morus notabilis]5.3e-1331.82Show/hide
Query:  PEFVSRVISQYQWPEFCAHPQEAVVPLVREFYAGL---REESISMAVVRGRWNPSA-----------------------KPMKEALKLVANKRVQWKESQ
        P F++RVI Q+ W +FC HP   +VPLVREFYA L    +E++ +  V+  +   A                       + ++  L  VA +   W+ S 
Subjt:  PEFVSRVISQYQWPEFCAHPQEAVVPLVREFYAGL---REESISMAVVRGRWNPSA-----------------------KPMKEALKLVANKRVQWKESQ

Query:  TKVKSLVPSDLKPKSAVWLHFNKNRLMPTTHDSTISVDRVMLLYCPMKGLEINI
            + +  +LK  + +W HF   R MP+TH  T++ DRV+LLY  + G+ +NI
Subjt:  TKVKSLVPSDLKPKSAVWLHFNKNRLMPTTHDSTISVDRVMLLYCPMKGLEINI

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]3.0e-1632.83Show/hide
Query:  RKRKREIKVERRTRMTRYLPRGRGQGLTRQ-------AKGAGTLPEFVSRVISQYQWPEFCAHPQEAVVPLVREFYAGLREESISMAVVRG---RWNPSA
        RK  + +K E     TRY    + + L  +       ++  G LP F+++VI+Q+ W +FCAHP++ +VPLVREFYA L +   +   VRG    W+  A
Subjt:  RKRKREIKVERRTRMTRYLPRGRGQGLTRQ-------AKGAGTLPEFVSRVISQYQWPEFCAHPQEAVVPLVREFYAGLREESISMAVVRG---RWNPSA

Query:  --------KPMKE---------------ALKLVANKRVQWKESQTKVKSLVPSDLKPKSAVWLHFNKNRLMPTTHDSTISVDRVMLLYCPMKGLEINI
                 P+ E                L+ VA    +W  S     + + S L P + VW HF K+ L+PTTH  T+S DR++LL+  + G  IN+
Subjt:  --------KPMKE---------------ALKLVANKRVQWKESQTKVKSLVPSDLKPKSAVWLHFNKNRLMPTTHDSTISVDRVMLLYCPMKGLEINI

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]3.5e-1733.33Show/hide
Query:  RKRKREIKVERRTRMTRYLPRGRGQGLTRQ-------AKGAGTLPEFVSRVISQYQWPEFCAHPQEAVVPLVREFYAGLREESISMAVVRG---RWNPSA
        RK  + +K E     TRY    + + L  +       ++  G LP F+++VI+Q+ W +FCAHP++ +VPLVREFYA L +   +   VRG    W+  A
Subjt:  RKRKREIKVERRTRMTRYLPRGRGQGLTRQ-------AKGAGTLPEFVSRVISQYQWPEFCAHPQEAVVPLVREFYAGLREESISMAVVRG---RWNPSA

Query:  --------KPMKE---------------ALKLVANKRVQWKESQTKVKSLVPSDLKPKSAVWLHFNKNRLMPTTHDSTISVDRVMLLYCPMKGLEINI
                 P+ E                L+ VA    +W  S     + + S L P + VW HF K+RL+PTTH  T+S DR++LL+  + G  IN+
Subjt:  --------KPMKE---------------ALKLVANKRVQWKESQTKVKSLVPSDLKPKSAVWLHFNKNRLMPTTHDSTISVDRVMLLYCPMKGLEINI

PON46588.1 hypothetical protein TorRG33x02_325580, partial [Trema orientale]9.9e-1230.86Show/hide
Query:  RYLPRGRGQGLTRQAKGAGTLPEFVSRVISQYQWPEFCAHPQEAVVPLVREFYAGLREESISMAVVRGRWNPSAK-----------PMKE----------
        ++ P G G+G       +   P F++ VI+Q+    FCAHP++ +VPLVREFYA L +       V G   P ++           P+ E          
Subjt:  RYLPRGRGQGLTRQAKGAGTLPEFVSRVISQYQWPEFCAHPQEAVVPLVREFYAGLREESISMAVVRGRWNPSAK-----------PMKE----------

Query:  -----ALKLVANKRVQWKESQTKVKSLVPSDLKPKSAVWLHFNKNRLMPTTHDSTISVDRVMLLYCPMKGLEINI
              LK VA  R +   S     + + S L   + +W HF ++RL+PTTH   +S   V+LLY  + G  IN+
Subjt:  -----ALKLVANKRVQWKESQTKVKSLVPSDLKPKSAVWLHFNKNRLMPTTHDSTISVDRVMLLYCPMKGLEINI

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]3.7e-1433.77Show/hide
Query:  PEFVSRVISQYQWPEFCAHPQEAVVPLVREFYAGLREESISMAVVRGRWNPSA-----------KPMKE---------------ALKLVANKRVQWKESQ
        P F++ VI Q+ W  FCAHP++ +VPLVREFY  +         +RG   P +            P+ E                L+ VA    +W  S 
Subjt:  PEFVSRVISQYQWPEFCAHPQEAVVPLVREFYAGLREESISMAVVRGRWNPSA-----------KPMKE---------------ALKLVANKRVQWKESQ

Query:  TKVKSLVPSDLKPKSAVWLHFNKNRLMPTTHDSTISVDRVMLLYCPMKGLEINI
            + + S L P + VW HF K+RL+PTTH  T+S + V LLY  + G  IN+
Subjt:  TKVKSLVPSDLKPKSAVWLHFNKNRLMPTTHDSTISVDRVMLLYCPMKGLEINI

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)1.4e-1632.83Show/hide
Query:  RKRKREIKVERRTRMTRYLPRGRGQGLTRQ-------AKGAGTLPEFVSRVISQYQWPEFCAHPQEAVVPLVREFYAGLREESISMAVVRG---RWNPSA
        RK  + +K E     TRY    + + L  +       ++  G LP F+++VI+Q+ W +FCAHP++ +VPLVREFYA L +   +   VRG    W+  A
Subjt:  RKRKREIKVERRTRMTRYLPRGRGQGLTRQ-------AKGAGTLPEFVSRVISQYQWPEFCAHPQEAVVPLVREFYAGLREESISMAVVRG---RWNPSA

Query:  --------KPMKE---------------ALKLVANKRVQWKESQTKVKSLVPSDLKPKSAVWLHFNKNRLMPTTHDSTISVDRVMLLYCPMKGLEINI
                 P+ E                L+ VA    +W  S     + + S L P + VW HF K+ L+PTTH  T+S DR++LL+  + G  IN+
Subjt:  --------KPMKE---------------ALKLVANKRVQWKESQTKVKSLVPSDLKPKSAVWLHFNKNRLMPTTHDSTISVDRVMLLYCPMKGLEINI

A0A2P5BCG4 Uncharacterized protein (Fragment)1.7e-1733.33Show/hide
Query:  RKRKREIKVERRTRMTRYLPRGRGQGLTRQ-------AKGAGTLPEFVSRVISQYQWPEFCAHPQEAVVPLVREFYAGLREESISMAVVRG---RWNPSA
        RK  + +K E     TRY    + + L  +       ++  G LP F+++VI+Q+ W +FCAHP++ +VPLVREFYA L +   +   VRG    W+  A
Subjt:  RKRKREIKVERRTRMTRYLPRGRGQGLTRQ-------AKGAGTLPEFVSRVISQYQWPEFCAHPQEAVVPLVREFYAGLREESISMAVVRG---RWNPSA

Query:  --------KPMKE---------------ALKLVANKRVQWKESQTKVKSLVPSDLKPKSAVWLHFNKNRLMPTTHDSTISVDRVMLLYCPMKGLEINI
                 P+ E                L+ VA    +W  S     + + S L P + VW HF K+RL+PTTH  T+S DR++LL+  + G  IN+
Subjt:  --------KPMKE---------------ALKLVANKRVQWKESQTKVKSLVPSDLKPKSAVWLHFNKNRLMPTTHDSTISVDRVMLLYCPMKGLEINI

A0A2P5BCT7 Uncharacterized protein (Fragment)4.8e-1230.86Show/hide
Query:  RYLPRGRGQGLTRQAKGAGTLPEFVSRVISQYQWPEFCAHPQEAVVPLVREFYAGLREESISMAVVRGRWNPSAK-----------PMKE----------
        ++ P G G+G       +   P F++ VI+Q+    FCAHP++ +VPLVREFYA L +       V G   P ++           P+ E          
Subjt:  RYLPRGRGQGLTRQAKGAGTLPEFVSRVISQYQWPEFCAHPQEAVVPLVREFYAGLREESISMAVVRGRWNPSAK-----------PMKE----------

Query:  -----ALKLVANKRVQWKESQTKVKSLVPSDLKPKSAVWLHFNKNRLMPTTHDSTISVDRVMLLYCPMKGLEINI
              LK VA  R +   S     + + S L   + +W HF ++RL+PTTH   +S   V+LLY  + G  IN+
Subjt:  -----ALKLVANKRVQWKESQTKVKSLVPSDLKPKSAVWLHFNKNRLMPTTHDSTISVDRVMLLYCPMKGLEINI

A0A2P5DAQ2 Uncharacterized protein1.8e-1433.77Show/hide
Query:  PEFVSRVISQYQWPEFCAHPQEAVVPLVREFYAGLREESISMAVVRGRWNPSA-----------KPMKE---------------ALKLVANKRVQWKESQ
        P F++ VI Q+ W  FCAHP++ +VPLVREFY  +         +RG   P +            P+ E                L+ VA    +W  S 
Subjt:  PEFVSRVISQYQWPEFCAHPQEAVVPLVREFYAGLREESISMAVVRGRWNPSA-----------KPMKE---------------ALKLVANKRVQWKESQ

Query:  TKVKSLVPSDLKPKSAVWLHFNKNRLMPTTHDSTISVDRVMLLYCPMKGLEINI
            + + S L P + VW HF K+RL+PTTH  T+S + V LLY  + G  IN+
Subjt:  TKVKSLVPSDLKPKSAVWLHFNKNRLMPTTHDSTISVDRVMLLYCPMKGLEINI

W9QTD9 Uncharacterized protein2.6e-1331.82Show/hide
Query:  PEFVSRVISQYQWPEFCAHPQEAVVPLVREFYAGL---REESISMAVVRGRWNPSA-----------------------KPMKEALKLVANKRVQWKESQ
        P F++RVI Q+ W +FC HP   +VPLVREFYA L    +E++ +  V+  +   A                       + ++  L  VA +   W+ S 
Subjt:  PEFVSRVISQYQWPEFCAHPQEAVVPLVREFYAGL---REESISMAVVRGRWNPSA-----------------------KPMKEALKLVANKRVQWKESQ

Query:  TKVKSLVPSDLKPKSAVWLHFNKNRLMPTTHDSTISVDRVMLLYCPMKGLEINI
            + +  +LK  + +W HF   R MP+TH  T++ DRV+LLY  + G+ +NI
Subjt:  TKVKSLVPSDLKPKSAVWLHFNKNRLMPTTHDSTISVDRVMLLYCPMKGLEINI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCCGTGAGATGGGTGCTCAGAGACACGCTGCCTTTGAAGAAGAATGGAATAGACAAGATGAAGACAAAGCCACCAAGGCAGCTGGAAGCTCTCGGCAAGGAGAAGC
TTCAATGGGTAAGGTTTCCGAACCTTCAACTAACCCCTCTTTTTCTTACTGGATAAAACCCGTTGTTACTTACAGCGCAAGAAAGAGGAGCCCAAAGGAAAATGTGTCTG
AAAAGCCGCTTGAGATTAAGCCCCTCAAAACCACAAGGATGCCTCCGGATGTATTCGAAGGGATAATTCGCCAAGCTGTGGCAAAGGCCCTTGAGATTGCTGAGGGGTAT
AAGGCTGAACAGGATGCTTTGAAAGAGGTTGAAGCGGAGAGAGAGATGGAAAATCAGAAAATGACTGAGGAAGATGAGGTAGAAGAAAAGGCCCAACTGGGGCCAATTGC
AGAAAATTTAGAAAAAGAAAAAGAAAGAGAAGTGGAGAATGAAGGCCAGAATGCGACCGCCTCTGGGCTGCATTCTGAGGGAGGCCTAGCCGAGGCCACTATTGATCTGC
CAGCTGAAGAGATTTTTGAGCCTCTATTCACACATGACCCACCAGCTGCTGATAGCACCTCTTCGGGAGAGAAGAGGGAAGAAGAGGAAAAAGAAGACGATGAGGCCGAG
ACCTCTAGTGATTCTGACTCTGATACAGAATCTAATTCAGAGATAAGGGAGCTAGATGATGACCAAGTCCCTATCTCTGCAGCATTAAAAAGAAAAAGAAAGAGAGAGAT
TAAGGTTGAGAGGAGGACAAGAATGACCCGATATTTGCCAAGAGGCCGAGGACAAGGTCTCACCCGCCAAGCCAAAGGAGCAGGAACACTGCCAGAGTTCGTGAGCAGGG
TCATATCTCAGTACCAGTGGCCGGAGTTCTGTGCTCACCCTCAGGAGGCTGTTGTGCCTTTAGTGCGAGAGTTTTACGCTGGCCTGAGGGAGGAAAGCATTAGCATGGCG
GTGGTGAGGGGAAGATGGAACCCTTCGGCCAAGCCGATGAAGGAAGCGCTGAAACTTGTGGCCAATAAGAGGGTTCAGTGGAAAGAATCGCAGACAAAAGTGAAGTCTCT
AGTGCCAAGCGACCTAAAGCCAAAATCGGCAGTTTGGCTTCACTTCAACAAGAACCGTTTGATGCCAACCACCCATGACAGCACGATTTCAGTGGATAGAGTGATGCTAC
TCTATTGCCCTATGAAGGGGTTGGAGATCAACATTGCTCTGGGCAAGGATGAGGAGCGTCACTTCTTCAAGTTGACCATTGACCTGTCCTTGATCGGGAAGCTCCAACAG
AACAGTATCCAGAGGAAAGACAAAACCTCTACATCTCAGGTCACTCCACCTACAGGGAAGAATGTAGCTTCTCCATCCCAGCACACTCCTTTCACAAGGCCTTCACCAGC
ATCAGAAGCCCTAGTTAGGTATGCAAAGGAGAGGGATGAAGCTATTAGAGAGTTCTATCTCTCTATTGCCCCGAGTATCGCTCCGGTCTTTCATAATTTCCCTAGGTCGC
TACTGCCCCAAGAAGAAGAGGATTCTGATAAAGAGGAAGATGAAGAGAATGATGAGAAAGAGAGTTCCTCGACCGAGGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGATCCGTGAGATGGGTGCTCAGAGACACGCTGCCTTTGAAGAAGAATGGAATAGACAAGATGAAGACAAAGCCACCAAGGCAGCTGGAAGCTCTCGGCAAGGAGAAGC
TTCAATGGGTAAGGTTTCCGAACCTTCAACTAACCCCTCTTTTTCTTACTGGATAAAACCCGTTGTTACTTACAGCGCAAGAAAGAGGAGCCCAAAGGAAAATGTGTCTG
AAAAGCCGCTTGAGATTAAGCCCCTCAAAACCACAAGGATGCCTCCGGATGTATTCGAAGGGATAATTCGCCAAGCTGTGGCAAAGGCCCTTGAGATTGCTGAGGGGTAT
AAGGCTGAACAGGATGCTTTGAAAGAGGTTGAAGCGGAGAGAGAGATGGAAAATCAGAAAATGACTGAGGAAGATGAGGTAGAAGAAAAGGCCCAACTGGGGCCAATTGC
AGAAAATTTAGAAAAAGAAAAAGAAAGAGAAGTGGAGAATGAAGGCCAGAATGCGACCGCCTCTGGGCTGCATTCTGAGGGAGGCCTAGCCGAGGCCACTATTGATCTGC
CAGCTGAAGAGATTTTTGAGCCTCTATTCACACATGACCCACCAGCTGCTGATAGCACCTCTTCGGGAGAGAAGAGGGAAGAAGAGGAAAAAGAAGACGATGAGGCCGAG
ACCTCTAGTGATTCTGACTCTGATACAGAATCTAATTCAGAGATAAGGGAGCTAGATGATGACCAAGTCCCTATCTCTGCAGCATTAAAAAGAAAAAGAAAGAGAGAGAT
TAAGGTTGAGAGGAGGACAAGAATGACCCGATATTTGCCAAGAGGCCGAGGACAAGGTCTCACCCGCCAAGCCAAAGGAGCAGGAACACTGCCAGAGTTCGTGAGCAGGG
TCATATCTCAGTACCAGTGGCCGGAGTTCTGTGCTCACCCTCAGGAGGCTGTTGTGCCTTTAGTGCGAGAGTTTTACGCTGGCCTGAGGGAGGAAAGCATTAGCATGGCG
GTGGTGAGGGGAAGATGGAACCCTTCGGCCAAGCCGATGAAGGAAGCGCTGAAACTTGTGGCCAATAAGAGGGTTCAGTGGAAAGAATCGCAGACAAAAGTGAAGTCTCT
AGTGCCAAGCGACCTAAAGCCAAAATCGGCAGTTTGGCTTCACTTCAACAAGAACCGTTTGATGCCAACCACCCATGACAGCACGATTTCAGTGGATAGAGTGATGCTAC
TCTATTGCCCTATGAAGGGGTTGGAGATCAACATTGCTCTGGGCAAGGATGAGGAGCGTCACTTCTTCAAGTTGACCATTGACCTGTCCTTGATCGGGAAGCTCCAACAG
AACAGTATCCAGAGGAAAGACAAAACCTCTACATCTCAGGTCACTCCACCTACAGGGAAGAATGTAGCTTCTCCATCCCAGCACACTCCTTTCACAAGGCCTTCACCAGC
ATCAGAAGCCCTAGTTAGGTATGCAAAGGAGAGGGATGAAGCTATTAGAGAGTTCTATCTCTCTATTGCCCCGAGTATCGCTCCGGTCTTTCATAATTTCCCTAGGTCGC
TACTGCCCCAAGAAGAAGAGGATTCTGATAAAGAGGAAGATGAAGAGAATGATGAGAAAGAGAGTTCCTCGACCGAGGAATAG
Protein sequenceShow/hide protein sequence
MIREMGAQRHAAFEEEWNRQDEDKATKAAGSSRQGEASMGKVSEPSTNPSFSYWIKPVVTYSARKRSPKENVSEKPLEIKPLKTTRMPPDVFEGIIRQAVAKALEIAEGY
KAEQDALKEVEAEREMENQKMTEEDEVEEKAQLGPIAENLEKEKEREVENEGQNATASGLHSEGGLAEATIDLPAEEIFEPLFTHDPPAADSTSSGEKREEEEKEDDEAE
TSSDSDSDTESNSEIRELDDDQVPISAALKRKRKREIKVERRTRMTRYLPRGRGQGLTRQAKGAGTLPEFVSRVISQYQWPEFCAHPQEAVVPLVREFYAGLREESISMA
VVRGRWNPSAKPMKEALKLVANKRVQWKESQTKVKSLVPSDLKPKSAVWLHFNKNRLMPTTHDSTISVDRVMLLYCPMKGLEINIALGKDEERHFFKLTIDLSLIGKLQQ
NSIQRKDKTSTSQVTPPTGKNVASPSQHTPFTRPSPASEALVRYAKERDEAIREFYLSIAPSIAPVFHNFPRSLLPQEEEDSDKEEDEENDEKESSSTEE