; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg011028 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg011028
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase
Genome locationscaffold4:28395690..28399364
RNA-Seq ExpressionSpg011028
SyntenySpg011028
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB53755.1 hypothetical protein L484_022412 [Morus notabilis]8.5e-1733.13Show/hide
Query:  VNVLFNVQEGQRDFPHAGYNEMAAAPSNEQLNAAVREVGIEGAQWRLLKTEKRTFQAAYLKSEANTWLGFIKLHLLPTTHDSTVSRDRVLLVFAILRSLS
        +N +F ++E   +     Y + A+  ++EQL   + EV IEGA W++      T     LK  A  W  F+    +P+TH  TV++DRVLL+++IL  +S
Subjt:  VNVLFNVQEGQRDFPHAGYNEMAAAPSNEQLNAAVREVGIEGAQWRLLKTEKRTFQAAYLKSEANTWLGFIKLHLLPTTHDSTVSRDRVLLVFAILRSLS

Query:  IDVGKIISNEIYSC-WRKKVGKLFFPNTITMLCQRARVPMSAEDVILMDKGIIDTPNLARLQR
        +++ +I   EI +C   +K G L+FP+ IT L  +A VP   ++ I+ + G I T +++R+ +
Subjt:  IDVGKIISNEIYSC-WRKKVGKLFFPNTITMLCQRARVPMSAEDVILMDKGIIDTPNLARLQR

KAA0067117.1 hypothetical protein E6C27_scaffold38G001760 [Cucumis melo var. makuwa]3.2e-1649.22Show/hide
Query:  VYKSNQKLYLIKGSREPRICVVCVRGNSGQIGWESHFNFFR--------------PRGNRSSLQTRELDKT-----------------VEIELPVPDTLP
        V+KSNQKLYLI+  REPRI      G          F+F +              PRGNRSSLQT ELDKT                 VEIELPVPDTLP
Subjt:  VYKSNQKLYLIKGSREPRICVVCVRGNSGQIGWESHFNFFR--------------PRGNRSSLQTRELDKT-----------------VEIELPVPDTLP

Query:  TSAESSRTSSSTWVELYIESVHNVNVLF
        TSAES  ++SSTW+ELY E VH V +LF
Subjt:  TSAESSRTSSSTWVELYIESVHNVNVLF

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]7.7e-1835.62Show/hide
Query:  VNVLFNVQEGQRDFPHAGYNEMAAAPSNEQLNAAVREVGIEGAQWRLLKTEKRTFQAAYLKSEANTWLGFIKLHLLPTTHDSTVSRDRVLLVFAILRSLS
        +N +F + +     P   ++E     +   L   +  V + GA+W +      T   + L   A  W  F+K HLLPTTH  TVS+DR+LL+ ++L   S
Subjt:  VNVLFNVQEGQRDFPHAGYNEMAAAPSNEQLNAAVREVGIEGAQWRLLKTEKRTFQAAYLKSEANTWLGFIKLHLLPTTHDSTVSRDRVLLVFAILRSLS

Query:  IDVGKIISNEIYSCWRKKVGKLFFPNTITMLCQRARVPMSAEDVILMDKGIIDTPNLARL
        I+VG++I +EI +C  +K G LFFP+ IT LC+ AR P    +  L + G ID   +AR+
Subjt:  IDVGKIISNEIYSCWRKKVGKLFFPNTITMLCQRARVPMSAEDVILMDKGIIDTPNLARL

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.4e-1635Show/hide
Query:  VNVLFNVQEGQRDFPHAGYNEMAAAPSNEQLNAAVREVGIEGAQWRLLKTEKRTFQAAYLKSEANTWLGFIKLHLLPTTHDSTVSRDRVLLVFAILRSLS
        +N +F + +     P   ++E     + + L   +  V   GA+W +      T   + L   A  W  F+K  LLPTTH  TVS+DR+LL+ ++L   S
Subjt:  VNVLFNVQEGQRDFPHAGYNEMAAAPSNEQLNAAVREVGIEGAQWRLLKTEKRTFQAAYLKSEANTWLGFIKLHLLPTTHDSTVSRDRVLLVFAILRSLS

Query:  IDVGKIISNEIYSCWRKKVGKLFFPNTITMLCQRARVPMSAEDVILMDKGIIDTPNLARL
        I+VG++I +EI +C  +K G LFFP+ IT LC+ AR P    +  L + G ID   +AR+
Subjt:  IDVGKIISNEIYSCWRKKVGKLFFPNTITMLCQRARVPMSAEDVILMDKGIIDTPNLARL

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]1.4e-1634.76Show/hide
Query:  SVHNVNVLFNVQEGQRDFPHAGYNEMAAAPSNEQLNAAVREVGIEGAQWRLLKTEKRTFQAAYLKSEANTWLGFIKLHLLPTTHDSTVSRDRVLLVFAIL
        S   +N ++ + +     P   ++E   A +  +L   +  V I GA+W +      T   + L   A  W  F+K  LLPTTH  TVS++RVLL++++L
Subjt:  SVHNVNVLFNVQEGQRDFPHAGYNEMAAAPSNEQLNAAVREVGIEGAQWRLLKTEKRTFQAAYLKSEANTWLGFIKLHLLPTTHDSTVSRDRVLLVFAIL

Query:  RSLSIDVGKIISNEIYSCWRKKVGKLFFPNTITMLCQRARVPMSAEDVILMDKGIIDTPNLARL
           SI+VG+II  EI +   +K G LFFP+ IT +C  AR P    +  L + G ID   +AR+
Subjt:  RSLSIDVGKIISNEIYSCWRKKVGKLFFPNTITMLCQRARVPMSAEDVILMDKGIIDTPNLARL

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)3.7e-1835.62Show/hide
Query:  VNVLFNVQEGQRDFPHAGYNEMAAAPSNEQLNAAVREVGIEGAQWRLLKTEKRTFQAAYLKSEANTWLGFIKLHLLPTTHDSTVSRDRVLLVFAILRSLS
        +N +F + +     P   ++E     +   L   +  V + GA+W +      T   + L   A  W  F+K HLLPTTH  TVS+DR+LL+ ++L   S
Subjt:  VNVLFNVQEGQRDFPHAGYNEMAAAPSNEQLNAAVREVGIEGAQWRLLKTEKRTFQAAYLKSEANTWLGFIKLHLLPTTHDSTVSRDRVLLVFAILRSLS

Query:  IDVGKIISNEIYSCWRKKVGKLFFPNTITMLCQRARVPMSAEDVILMDKGIIDTPNLARL
        I+VG++I +EI +C  +K G LFFP+ IT LC+ AR P    +  L + G ID   +AR+
Subjt:  IDVGKIISNEIYSCWRKKVGKLFFPNTITMLCQRARVPMSAEDVILMDKGIIDTPNLARL

A0A2P5BCG4 Uncharacterized protein (Fragment)7.0e-1735Show/hide
Query:  VNVLFNVQEGQRDFPHAGYNEMAAAPSNEQLNAAVREVGIEGAQWRLLKTEKRTFQAAYLKSEANTWLGFIKLHLLPTTHDSTVSRDRVLLVFAILRSLS
        +N +F + +     P   ++E     + + L   +  V   GA+W +      T   + L   A  W  F+K  LLPTTH  TVS+DR+LL+ ++L   S
Subjt:  VNVLFNVQEGQRDFPHAGYNEMAAAPSNEQLNAAVREVGIEGAQWRLLKTEKRTFQAAYLKSEANTWLGFIKLHLLPTTHDSTVSRDRVLLVFAILRSLS

Query:  IDVGKIISNEIYSCWRKKVGKLFFPNTITMLCQRARVPMSAEDVILMDKGIIDTPNLARL
        I+VG++I +EI +C  +K G LFFP+ IT LC+ AR P    +  L + G ID   +AR+
Subjt:  IDVGKIISNEIYSCWRKKVGKLFFPNTITMLCQRARVPMSAEDVILMDKGIIDTPNLARL

A0A2P5CPE8 Uncharacterized protein7.0e-1734.76Show/hide
Query:  SVHNVNVLFNVQEGQRDFPHAGYNEMAAAPSNEQLNAAVREVGIEGAQWRLLKTEKRTFQAAYLKSEANTWLGFIKLHLLPTTHDSTVSRDRVLLVFAIL
        S   +N ++ + +     P   ++E   A +  +L   +  V I GA+W +      T   + L   A  W  F+K  LLPTTH  TVS++RVLL++++L
Subjt:  SVHNVNVLFNVQEGQRDFPHAGYNEMAAAPSNEQLNAAVREVGIEGAQWRLLKTEKRTFQAAYLKSEANTWLGFIKLHLLPTTHDSTVSRDRVLLVFAIL

Query:  RSLSIDVGKIISNEIYSCWRKKVGKLFFPNTITMLCQRARVPMSAEDVILMDKGIIDTPNLARL
           SI+VG+II  EI +   +K G LFFP+ IT +C  AR P    +  L + G ID   +AR+
Subjt:  RSLSIDVGKIISNEIYSCWRKKVGKLFFPNTITMLCQRARVPMSAEDVILMDKGIIDTPNLARL

A0A5A7VIY9 Uncharacterized protein1.6e-1649.22Show/hide
Query:  VYKSNQKLYLIKGSREPRICVVCVRGNSGQIGWESHFNFFR--------------PRGNRSSLQTRELDKT-----------------VEIELPVPDTLP
        V+KSNQKLYLI+  REPRI      G          F+F +              PRGNRSSLQT ELDKT                 VEIELPVPDTLP
Subjt:  VYKSNQKLYLIKGSREPRICVVCVRGNSGQIGWESHFNFFR--------------PRGNRSSLQTRELDKT-----------------VEIELPVPDTLP

Query:  TSAESSRTSSSTWVELYIESVHNVNVLF
        TSAES  ++SSTW+ELY E VH V +LF
Subjt:  TSAESSRTSSSTWVELYIESVHNVNVLF

W9QTD9 Uncharacterized protein4.1e-1733.13Show/hide
Query:  VNVLFNVQEGQRDFPHAGYNEMAAAPSNEQLNAAVREVGIEGAQWRLLKTEKRTFQAAYLKSEANTWLGFIKLHLLPTTHDSTVSRDRVLLVFAILRSLS
        +N +F ++E   +     Y + A+  ++EQL   + EV IEGA W++      T     LK  A  W  F+    +P+TH  TV++DRVLL+++IL  +S
Subjt:  VNVLFNVQEGQRDFPHAGYNEMAAAPSNEQLNAAVREVGIEGAQWRLLKTEKRTFQAAYLKSEANTWLGFIKLHLLPTTHDSTVSRDRVLLVFAILRSLS

Query:  IDVGKIISNEIYSC-WRKKVGKLFFPNTITMLCQRARVPMSAEDVILMDKGIIDTPNLARLQR
        +++ +I   EI +C   +K G L+FP+ IT L  +A VP   ++ I+ + G I T +++R+ +
Subjt:  IDVGKIISNEIYSC-WRKKVGKLFFPNTITMLCQRARVPMSAEDVILMDKGIIDTPNLARLQR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTAAAACAAGAGGGAGGAGAGAAAGGGATGCTGAGGAAGAGGAAGTGTCGATTACGCCTGAGGCACCGAAGACAAGAACGAAGAGAAGGAAGACACCGGACGAAAG
AGAGGCTAAGAGACGAAGACGGAAACAGCGAGCTGAGGTTGCAGAAGTAGTACGAAAAGTGGTCAAAGACCTTGCTGAAGAAACGGTTGAGGAAGAACAACCAAAAGATC
CTGAAGATAAGAAAGATTCGGAACAGACTCAAGAAGTTGTGCCGGAGGTACCACGTCGTCGCTGCCGTAAGCAAAAGGCGGGACGAATTAAGGTGATCAGGACAGACACT
CCATCTCCGTCGACGATAGAATCTAAGAAAGAAAATTCTGAGAAAGAAGAGCAAGAGAAAGAAGAGGTTGAAAAGAAAGCGGAAGAAGAGGCCTGGACGAAGCAGCAAGA
AGAAAAGGGAAAAGGAGTTGCTGAAGCACCGGCAGAGACAGAAGAGACTTACGCTGAGGAACCGAGACTGCCGATTTTCGAGCAAACCAGGAGGATCTCTGGTGTTCTCT
GGTGTTTTGAGCATTCGGGGGTGTACAAGTCGAATCAGAAGCTATATTTGATAAAGGGTAGCAGAGAACCTCGAATCTGTGTTGTCTGTGTTCGGGGCAATTCTGGGCAA
ATCGGTTGGGAATCGCATTTTAATTTCTTCAGGCCAAGAGGAAATAGGTCGAGTCTACAGACCAGGGAACTAGATAAGACTGTAGAGATCGAGCTCCCGGTGCCTGATAC
ACTGCCAACGTCTGCTGAAAGTTCCAGAACAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCTGTTCATAATGTAAATGTTTTGTTCAATGTTCAAGAGGGTCAGC
GGGATTTCCCACATGCCGGGTATAATGAGATGGCGGCAGCGCCATCCAATGAACAGCTGAATGCAGCTGTTCGAGAAGTGGGAATTGAGGGGGCCCAGTGGCGATTGTTG
AAGACAGAGAAGAGAACTTTCCAAGCAGCCTATCTCAAGAGTGAGGCCAACACTTGGTTAGGATTCATCAAGCTGCACCTACTGCCAACAACCCACGACTCTACTGTCTC
CCGTGATCGAGTTCTTCTGGTATTTGCTATTCTGAGGTCATTAAGTATAGATGTTGGAAAAATTATCTCAAATGAAATTTATTCCTGTTGGAGGAAGAAGGTGGGTAAGC
TCTTTTTCCCGAACACAATAACTATGCTGTGTCAAAGAGCTAGGGTTCCCATGAGCGCAGAGGATGTTATCCTGATGGATAAGGGAATAATAGACACACCGAACCTGGCA
AGGCTTCAGAGGACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTAAAACAAGAGGGAGGAGAGAAAGGGATGCTGAGGAAGAGGAAGTGTCGATTACGCCTGAGGCACCGAAGACAAGAACGAAGAGAAGGAAGACACCGGACGAAAG
AGAGGCTAAGAGACGAAGACGGAAACAGCGAGCTGAGGTTGCAGAAGTAGTACGAAAAGTGGTCAAAGACCTTGCTGAAGAAACGGTTGAGGAAGAACAACCAAAAGATC
CTGAAGATAAGAAAGATTCGGAACAGACTCAAGAAGTTGTGCCGGAGGTACCACGTCGTCGCTGCCGTAAGCAAAAGGCGGGACGAATTAAGGTGATCAGGACAGACACT
CCATCTCCGTCGACGATAGAATCTAAGAAAGAAAATTCTGAGAAAGAAGAGCAAGAGAAAGAAGAGGTTGAAAAGAAAGCGGAAGAAGAGGCCTGGACGAAGCAGCAAGA
AGAAAAGGGAAAAGGAGTTGCTGAAGCACCGGCAGAGACAGAAGAGACTTACGCTGAGGAACCGAGACTGCCGATTTTCGAGCAAACCAGGAGGATCTCTGGTGTTCTCT
GGTGTTTTGAGCATTCGGGGGTGTACAAGTCGAATCAGAAGCTATATTTGATAAAGGGTAGCAGAGAACCTCGAATCTGTGTTGTCTGTGTTCGGGGCAATTCTGGGCAA
ATCGGTTGGGAATCGCATTTTAATTTCTTCAGGCCAAGAGGAAATAGGTCGAGTCTACAGACCAGGGAACTAGATAAGACTGTAGAGATCGAGCTCCCGGTGCCTGATAC
ACTGCCAACGTCTGCTGAAAGTTCCAGAACAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCTGTTCATAATGTAAATGTTTTGTTCAATGTTCAAGAGGGTCAGC
GGGATTTCCCACATGCCGGGTATAATGAGATGGCGGCAGCGCCATCCAATGAACAGCTGAATGCAGCTGTTCGAGAAGTGGGAATTGAGGGGGCCCAGTGGCGATTGTTG
AAGACAGAGAAGAGAACTTTCCAAGCAGCCTATCTCAAGAGTGAGGCCAACACTTGGTTAGGATTCATCAAGCTGCACCTACTGCCAACAACCCACGACTCTACTGTCTC
CCGTGATCGAGTTCTTCTGGTATTTGCTATTCTGAGGTCATTAAGTATAGATGTTGGAAAAATTATCTCAAATGAAATTTATTCCTGTTGGAGGAAGAAGGTGGGTAAGC
TCTTTTTCCCGAACACAATAACTATGCTGTGTCAAAGAGCTAGGGTTCCCATGAGCGCAGAGGATGTTATCCTGATGGATAAGGGAATAATAGACACACCGAACCTGGCA
AGGCTTCAGAGGACTTAG
Protein sequenceShow/hide protein sequence
MTKTRGRRERDAEEEEVSITPEAPKTRTKRRKTPDEREAKRRRRKQRAEVAEVVRKVVKDLAEETVEEEQPKDPEDKKDSEQTQEVVPEVPRRRCRKQKAGRIKVIRTDT
PSPSTIESKKENSEKEEQEKEEVEKKAEEEAWTKQQEEKGKGVAEAPAETEETYAEEPRLPIFEQTRRISGVLWCFEHSGVYKSNQKLYLIKGSREPRICVVCVRGNSGQ
IGWESHFNFFRPRGNRSSLQTRELDKTVEIELPVPDTLPTSAESSRTSSSTWVELYIESVHNVNVLFNVQEGQRDFPHAGYNEMAAAPSNEQLNAAVREVGIEGAQWRLL
KTEKRTFQAAYLKSEANTWLGFIKLHLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIISNEIYSCWRKKVGKLFFPNTITMLCQRARVPMSAEDVILMDKGIIDTPNLA
RLQRT