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Spg011041 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg011041
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 2-like
Genome locationscaffold4:28317421..28318250
RNA-Seq ExpressionSpg011041
SyntenySpg011041
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0032196 - transposition (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061274.1 uncharacterized protein E6C27_scaffold455G001170 [Cucumis melo var. makuwa]8.4e-3751.39Show/hide
Query:  NIVPVSEGQATTSVVCEYAKTIMRITNRMHCTPRDIIEYARKTHEISISYDKAWRGREKALNELRGSPEESYAQIPAFAARLIERNPGTYTAQEVDSNDR
        ++V     QAT+ +V E  K I ++ ++  C P D+I Y +  H ++ISYDKAWRGRE ALN +RG+PE+SYA + AF+  LI  NPGTYTA+E D   R
Subjt:  NIVPVSEGQATTSVVCEYAKTIMRITNRMHCTPRDIIEYARKTHEISISYDKAWRGREKALNELRGSPEESYAQIPAFAARLIERNPGTYTAQEVDSNDR

Query:  FKFFFMSIAASIDEWKHCLSVIFVDGTSLKNKFSGTLLTPCTFE
        FKF+FM++AASID W +C+ VI VDG ++KNK+ GTL++ CT +
Subjt:  FKFFFMSIAASIDEWKHCLSVIFVDGTSLKNKFSGTLLTPCTFE

KAA0064137.1 MuDRA-like transposase [Cucumis melo var. makuwa]2.1e-3549.31Show/hide
Query:  NIVPVSEGQATTSVVCEYAKTIMRITNRMHCTPRDIIEYARKTHEISISYDKAWRGREKALNELRGSPEESYAQIPAFAARLIERNPGTYTAQEVDSNDR
        ++V     QAT+ +V E  K I ++ ++  C P ++I Y +  H++++SYDKAWRGRE ALN +RG+PE+SYA + AF+  LI  NPGTYTA+E D    
Subjt:  NIVPVSEGQATTSVVCEYAKTIMRITNRMHCTPRDIIEYARKTHEISISYDKAWRGREKALNELRGSPEESYAQIPAFAARLIERNPGTYTAQEVDSNDR

Query:  FKFFFMSIAASIDEWKHCLSVIFVDGTSLKNKFSGTLLTPCTFE
        FKF+FM +AASID W +C+ VI VDG ++KNK+ GTL++ CT +
Subjt:  FKFFFMSIAASIDEWKHCLSVIFVDGTSLKNKFSGTLLTPCTFE

TYK29863.1 MuDRA-like transposase [Cucumis melo var. makuwa]1.1e-3651.39Show/hide
Query:  NIVPVSEGQATTSVVCEYAKTIMRITNRMHCTPRDIIEYARKTHEISISYDKAWRGREKALNELRGSPEESYAQIPAFAARLIERNPGTYTAQEVDSNDR
        ++V     QAT+ +V E  K I +  ++  C P D+I Y +  H ++ISYDKAWRGRE ALN +RG+PE+SYA + AF+  LI  NPGTYTA+E D   R
Subjt:  NIVPVSEGQATTSVVCEYAKTIMRITNRMHCTPRDIIEYARKTHEISISYDKAWRGREKALNELRGSPEESYAQIPAFAARLIERNPGTYTAQEVDSNDR

Query:  FKFFFMSIAASIDEWKHCLSVIFVDGTSLKNKFSGTLLTPCTFE
        FKF+FM++AASID W +C+ VI VDG ++KNK+ GTL++ CT +
Subjt:  FKFFFMSIAASIDEWKHCLSVIFVDGTSLKNKFSGTLLTPCTFE

XP_008455803.1 PREDICTED: uncharacterized protein LOC103495899 [Cucumis melo]2.4e-3650.69Show/hide
Query:  NIVPVSEGQATTSVVCEYAKTIMRITNRMHCTPRDIIEYARKTHEISISYDKAWRGREKALNELRGSPEESYAQIPAFAARLIERNPGTYTAQEVDSNDR
        ++V     QAT+ +V E  K I +  +++ C P D+I Y +  H ++ISYDKAW GRE ALN +RG+PE+SYA + AF+  LI  NPGTYTA+E D   R
Subjt:  NIVPVSEGQATTSVVCEYAKTIMRITNRMHCTPRDIIEYARKTHEISISYDKAWRGREKALNELRGSPEESYAQIPAFAARLIERNPGTYTAQEVDSNDR

Query:  FKFFFMSIAASIDEWKHCLSVIFVDGTSLKNKFSGTLLTPCTFE
        FKF+FM++AASID W +C+ VI VDG ++KNK+ GTL++ CT +
Subjt:  FKFFFMSIAASIDEWKHCLSVIFVDGTSLKNKFSGTLLTPCTFE

XP_016901440.1 PREDICTED: uncharacterized protein LOC107991253 [Cucumis melo]1.0e-3447.22Show/hide
Query:  NIVPVSEGQATTSVVCEYAKTIMRITNRMHCTPRDIIEYARKTHEISISYDKAWRGREKALNELRGSPEESYAQIPAFAARLIERNPGTYTAQEVDSNDR
        ++V     QAT+ +V E    I ++ ++  C P D+I Y +  H++++SYDKAWRGRE ALN +RG+P++SY  +  F+  LI  NPGTYTA+E D   R
Subjt:  NIVPVSEGQATTSVVCEYAKTIMRITNRMHCTPRDIIEYARKTHEISISYDKAWRGREKALNELRGSPEESYAQIPAFAARLIERNPGTYTAQEVDSNDR

Query:  FKFFFMSIAASIDEWKHCLSVIFVDGTSLKNKFSGTLLTPCTFE
        FKF+FM++A SID W +C+ VI VDG ++KNK+ GTL++ CT +
Subjt:  FKFFFMSIAASIDEWKHCLSVIFVDGTSLKNKFSGTLLTPCTFE

TrEMBL top hitse value%identityAlignment
A0A1S3C300 uncharacterized protein LOC1034958991.2e-3650.69Show/hide
Query:  NIVPVSEGQATTSVVCEYAKTIMRITNRMHCTPRDIIEYARKTHEISISYDKAWRGREKALNELRGSPEESYAQIPAFAARLIERNPGTYTAQEVDSNDR
        ++V     QAT+ +V E  K I +  +++ C P D+I Y +  H ++ISYDKAW GRE ALN +RG+PE+SYA + AF+  LI  NPGTYTA+E D   R
Subjt:  NIVPVSEGQATTSVVCEYAKTIMRITNRMHCTPRDIIEYARKTHEISISYDKAWRGREKALNELRGSPEESYAQIPAFAARLIERNPGTYTAQEVDSNDR

Query:  FKFFFMSIAASIDEWKHCLSVIFVDGTSLKNKFSGTLLTPCTFE
        FKF+FM++AASID W +C+ VI VDG ++KNK+ GTL++ CT +
Subjt:  FKFFFMSIAASIDEWKHCLSVIFVDGTSLKNKFSGTLLTPCTFE

A0A5A7V1Z6 CCHC-type domain-containing protein4.1e-3751.39Show/hide
Query:  NIVPVSEGQATTSVVCEYAKTIMRITNRMHCTPRDIIEYARKTHEISISYDKAWRGREKALNELRGSPEESYAQIPAFAARLIERNPGTYTAQEVDSNDR
        ++V     QAT+ +V E  K I ++ ++  C P D+I Y +  H ++ISYDKAWRGRE ALN +RG+PE+SYA + AF+  LI  NPGTYTA+E D   R
Subjt:  NIVPVSEGQATTSVVCEYAKTIMRITNRMHCTPRDIIEYARKTHEISISYDKAWRGREKALNELRGSPEESYAQIPAFAARLIERNPGTYTAQEVDSNDR

Query:  FKFFFMSIAASIDEWKHCLSVIFVDGTSLKNKFSGTLLTPCTFE
        FKF+FM++AASID W +C+ VI VDG ++KNK+ GTL++ CT +
Subjt:  FKFFFMSIAASIDEWKHCLSVIFVDGTSLKNKFSGTLLTPCTFE

A0A5A7VAU3 MuDRA-like transposase1.0e-3549.31Show/hide
Query:  NIVPVSEGQATTSVVCEYAKTIMRITNRMHCTPRDIIEYARKTHEISISYDKAWRGREKALNELRGSPEESYAQIPAFAARLIERNPGTYTAQEVDSNDR
        ++V     QAT+ +V E  K I ++ ++  C P ++I Y +  H++++SYDKAWRGRE ALN +RG+PE+SYA + AF+  LI  NPGTYTA+E D    
Subjt:  NIVPVSEGQATTSVVCEYAKTIMRITNRMHCTPRDIIEYARKTHEISISYDKAWRGREKALNELRGSPEESYAQIPAFAARLIERNPGTYTAQEVDSNDR

Query:  FKFFFMSIAASIDEWKHCLSVIFVDGTSLKNKFSGTLLTPCTFE
        FKF+FM +AASID W +C+ VI VDG ++KNK+ GTL++ CT +
Subjt:  FKFFFMSIAASIDEWKHCLSVIFVDGTSLKNKFSGTLLTPCTFE

A0A5D3DDB9 Protein FAR1-RELATED SEQUENCE 45.0e-3550Show/hide
Query:  NIVPVSEGQATTSVVCEYAKTIMRITNRMHCTPRDIIEYARKTHEISISYDKAWRGREKALNELRGSPEESYAQIPAFAARLIERNPGTYTAQEVDSNDR
        ++V     QAT+ +V E  K I +  ++  C P D+I Y +  H  +ISYDKAWRG E ALN +RG+PE+SYA + AF+  LI  NPGTYTA+E D   R
Subjt:  NIVPVSEGQATTSVVCEYAKTIMRITNRMHCTPRDIIEYARKTHEISISYDKAWRGREKALNELRGSPEESYAQIPAFAARLIERNPGTYTAQEVDSNDR

Query:  FKFFFMSIAASIDEWKHCLSVIFVDGTSLKNKFSGTLLTPCTFE
        FKF+FM++AASID W +C+ VI V+G ++KNK+ GTL++ CT +
Subjt:  FKFFFMSIAASIDEWKHCLSVIFVDGTSLKNKFSGTLLTPCTFE

A0A5D3E198 MuDRA-like transposase5.3e-3751.39Show/hide
Query:  NIVPVSEGQATTSVVCEYAKTIMRITNRMHCTPRDIIEYARKTHEISISYDKAWRGREKALNELRGSPEESYAQIPAFAARLIERNPGTYTAQEVDSNDR
        ++V     QAT+ +V E  K I +  ++  C P D+I Y +  H ++ISYDKAWRGRE ALN +RG+PE+SYA + AF+  LI  NPGTYTA+E D   R
Subjt:  NIVPVSEGQATTSVVCEYAKTIMRITNRMHCTPRDIIEYARKTHEISISYDKAWRGREKALNELRGSPEESYAQIPAFAARLIERNPGTYTAQEVDSNDR

Query:  FKFFFMSIAASIDEWKHCLSVIFVDGTSLKNKFSGTLLTPCTFE
        FKF+FM++AASID W +C+ VI VDG ++KNK+ GTL++ CT +
Subjt:  FKFFFMSIAASIDEWKHCLSVIFVDGTSLKNKFSGTLLTPCTFE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGGGTAGATACTGCTATACACTACGGGGGGCAGTCCCGGGGGGAGACAAATTTTGAGTTTGTTAACTCAGATGGGATTGACGCATTGACCAACATAGTACCTGTATCGGA
GGGGCAAGCGACGACGAGTGTTGTGTGTGAGTATGCGAAGACTATAATGAGGATCACTAACAGGATGCATTGTACTCCTCGGGACATAATAGAGTATGCTAGGAAAACGC
ACGAGATCAGTATTAGTTATGACAAAGCATGGAGGGGTAGAGAAAAGGCGTTAAATGAGTTGAGAGGATCTCCTGAAGAGTCTTATGCGCAAATTCCAGCGTTTGCAGCT
AGGTTGATCGAAAGAAATCCAGGTACGTACACCGCCCAGGAAGTTGATTCAAATGACAGGTTCAAATTCTTCTTCATGAGTATTGCAGCATCCATAGACGAGTGGAAACA
CTGTCTCTCGGTTATTTTTGTAGATGGTACATCTTTGAAGAATAAATTCAGTGGCACCCTTTTGACGCCCTGCACATTTGAG
mRNA sequenceShow/hide mRNA sequence
GGGGTAGATACTGCTATACACTACGGGGGGCAGTCCCGGGGGGAGACAAATTTTGAGTTTGTTAACTCAGATGGGATTGACGCATTGACCAACATAGTACCTGTATCGGA
GGGGCAAGCGACGACGAGTGTTGTGTGTGAGTATGCGAAGACTATAATGAGGATCACTAACAGGATGCATTGTACTCCTCGGGACATAATAGAGTATGCTAGGAAAACGC
ACGAGATCAGTATTAGTTATGACAAAGCATGGAGGGGTAGAGAAAAGGCGTTAAATGAGTTGAGAGGATCTCCTGAAGAGTCTTATGCGCAAATTCCAGCGTTTGCAGCT
AGGTTGATCGAAAGAAATCCAGGTACGTACACCGCCCAGGAAGTTGATTCAAATGACAGGTTCAAATTCTTCTTCATGAGTATTGCAGCATCCATAGACGAGTGGAAACA
CTGTCTCTCGGTTATTTTTGTAGATGGTACATCTTTGAAGAATAAATTCAGTGGCACCCTTTTGACGCCCTGCACATTTGAG
Protein sequenceShow/hide protein sequence
GVDTAIHYGGQSRGETNFEFVNSDGIDALTNIVPVSEGQATTSVVCEYAKTIMRITNRMHCTPRDIIEYARKTHEISISYDKAWRGREKALNELRGSPEESYAQIPAFAA
RLIERNPGTYTAQEVDSNDRFKFFFMSIAASIDEWKHCLSVIFVDGTSLKNKFSGTLLTPCTFE