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Spg011072 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg011072
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase
Genome locationscaffold4:29018495..29021499
RNA-Seq ExpressionSpg011072
SyntenySpg011072
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]8.0e-1328.83Show/hide
Query:  SNEQLSDAVREVGVEGAQWRLSKTEKRTFQSAYLKREANTWMGFIKQRLLPTTHDSTVSRERVLLAFAILRSPSIDVGKIIASEISGWVPENKGDVI---
        + + L   +  V   GA+W +S     T   + L   A  W  F+K RLLPTTH  TVS++R+LL  ++L   SI+VG++I SEI        G +    
Subjt:  SNEQLSDAVREVGVEGAQWRLSKTEKRTFQSAYLKREANTWMGFIKQRLLPTTHDSTVSRERVLLAFAILRSPSIDVGKIIASEISGWVPENKGDVI---

Query:  -------------------LFDKGIIDTPNLAQL------QRTQEA-----------RQGGLVFGIHNILEQLALSASMQEF--------AERQSHTFWN
                           L + G ID   +A++      + TQ+            R  G +      LEQ      +Q++          +Q   FW 
Subjt:  -------------------LFDKGIIDTPNLAQL------QRTQEA-----------RQGGLVFGIHNILEQLALSASMQEF--------AERQSHTFWN

Query:  YVKRRDANLKKALEENFSKPYP
        Y K RD  LKKAL+ NF++P P
Subjt:  YVKRRDANLKKALEENFSKPYP

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]1.3e-1030.81Show/hide
Query:  ANTWMGFIKQRLLPTTHDSTVSRERVLLAFAILRSPSIDVGKIIASEISGWVPENKGDVI----------------------LFDKGIIDTPNLA-----
        A  W  F+K RLLPTTH  TVS++R+LL +++L   SI+VG++I SEI        G +                       L   G ID   +A     
Subjt:  ANTWMGFIKQRLLPTTHDSTVSRERVLLAFAILRSPSIDVGKIIASEISGWVPENKGDVI----------------------LFDKGIIDTPNLA-----

Query:  -QLQRTQE-----------ARQGGLVFGIHNILEQLALSASMQEF--------AERQSHTFWNYVKRRDANLKKALEENFSKPYP
         Q + TQ+           +R  G +      LEQ      +Q++          +Q   FW Y K RD  LKKAL+ NF++P P
Subjt:  -QLQRTQE-----------ARQGGLVFGIHNILEQLALSASMQEF--------AERQSHTFWNYVKRRDANLKKALEENFSKPYP

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]3.1e-0939.58Show/hide
Query:  APSNEQLSDAVREVGVEGAQWRLSKTEKRTFQSAYLKREANTWMGFIKQRLLPTTHDSTVSRERVLLAFAILRSPSIDVGKIIASEISGWVPENKG
        A +  +L+  +  V + GA+W +S     T   + L   A  W  F+K RLLPTTH  TVS+ERVLL +++L   SI+VG+II  EI  +     G
Subjt:  APSNEQLSDAVREVGVEGAQWRLSKTEKRTFQSAYLKREANTWMGFIKQRLLPTTHDSTVSRERVLLAFAILRSPSIDVGKIIASEISGWVPENKG

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]2.5e-1431.58Show/hide
Query:  QLSDAVREVGVEGAQWRLSKTEKRTFQSAYLKREANTWMGFIKQRLLPTTHDSTVSRERVLLAFAILRSPSIDVGKIIASEISGWVPENKGDVI------
        +L   +  V   GA+W +S     T   + L   A  W  F+K RLLPTTH   VS++R+LL  ++L   SI+VG++I SEI     +  G +       
Subjt:  QLSDAVREVGVEGAQWRLSKTEKRTFQSAYLKREANTWMGFIKQRLLPTTHDSTVSRERVLLAFAILRSPSIDVGKIIASEISGWVPENKGDVI------

Query:  --------------LFDKGIIDTPNLAQL------QRTQE-----------ARQGGLVFGIHNILEQLALSASMQEFAERQSHTFWNYVKRRDANLKKAL
                      L + G ID   +A++      + TQ+           +R  G V      LEQ     S QE   +Q   FW Y K RD  LKKAL
Subjt:  --------------LFDKGIIDTPNLAQL------QRTQE-----------ARQGGLVFGIHNILEQLALSASMQEFAERQSHTFWNYVKRRDANLKKAL

Query:  EENFSKPYP
        + NF++P P
Subjt:  EENFSKPYP

XP_024971944.1 uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]5.4e-0927.32Show/hide
Query:  MAVAPSNEQLSDAVREVGVEGAQWRL-SKTEKRTFQSAYLKREANTWMGFIKQRLLPTTHDSTVSRERVLLAFAILRSPSIDVGKIIASEI---------
        ++ + S  +L +  RE+G  G +W   S    RT++++ LK  AN W+ FI+  L PTTHDS++S E+++L + ++   +I+VGK++   I         
Subjt:  MAVAPSNEQLSDAVREVGVEGAQWRL-SKTEKRTFQSAYLKREANTWMGFIKQRLLPTTHDSTVSRERVLLAFAILRSPSIDVGKIIASEI---------

Query:  -------------SGWVPENKGDVIL---FDKGIIDTPNLAQL-QRTQEARQ-GGLVFGIHNILEQLALSASMQEFAERQSHTFWNYVKRRDANLKKALE
                        VPE   D+++    +K  ID   +++L +R++  R+  G+   +  +LEQ   S SM +F   Q       +K   A+L   L+
Subjt:  -------------SGWVPENKGDVIL---FDKGIIDTPNLAQL-QRTQEARQ-GGLVFGIHNILEQLALSASMQEFAERQSHTFWNYVKRRDANLKKALE

Query:  ENFSK
         +  K
Subjt:  ENFSK

TrEMBL top hitse value%identityAlignment
A0A061FAJ6 Uncharacterized protein3.4e-0938.1Show/hide
Query:  NEQLSDAVREVGVEGAQWRLSKTEKRTFQSAYLKREANTWMGFIKQRLLPTTHDSTVSRERVLLAFAILRSPSIDVGKIIASEI
        ++  ++ +  + +EGAQW+ S  E  +F+ + +K+E   W+ F+  RLLP+TH S V+++R +L +AI+   SIDVGK+I+  I
Subjt:  NEQLSDAVREVGVEGAQWRLSKTEKRTFQSAYLKREANTWMGFIKQRLLPTTHDSTVSRERVLLAFAILRSPSIDVGKIIASEI

A0A2P5BCG4 Uncharacterized protein (Fragment)3.9e-1328.83Show/hide
Query:  SNEQLSDAVREVGVEGAQWRLSKTEKRTFQSAYLKREANTWMGFIKQRLLPTTHDSTVSRERVLLAFAILRSPSIDVGKIIASEISGWVPENKGDVI---
        + + L   +  V   GA+W +S     T   + L   A  W  F+K RLLPTTH  TVS++R+LL  ++L   SI+VG++I SEI        G +    
Subjt:  SNEQLSDAVREVGVEGAQWRLSKTEKRTFQSAYLKREANTWMGFIKQRLLPTTHDSTVSRERVLLAFAILRSPSIDVGKIIASEISGWVPENKGDVI---

Query:  -------------------LFDKGIIDTPNLAQL------QRTQEA-----------RQGGLVFGIHNILEQLALSASMQEF--------AERQSHTFWN
                           L + G ID   +A++      + TQ+            R  G +      LEQ      +Q++          +Q   FW 
Subjt:  -------------------LFDKGIIDTPNLAQL------QRTQEA-----------RQGGLVFGIHNILEQLALSASMQEF--------AERQSHTFWN

Query:  YVKRRDANLKKALEENFSKPYP
        Y K RD  LKKAL+ NF++P P
Subjt:  YVKRRDANLKKALEENFSKPYP

A0A2P5CEY2 Uncharacterized protein6.2e-1130.81Show/hide
Query:  ANTWMGFIKQRLLPTTHDSTVSRERVLLAFAILRSPSIDVGKIIASEISGWVPENKGDVI----------------------LFDKGIIDTPNLA-----
        A  W  F+K RLLPTTH  TVS++R+LL +++L   SI+VG++I SEI        G +                       L   G ID   +A     
Subjt:  ANTWMGFIKQRLLPTTHDSTVSRERVLLAFAILRSPSIDVGKIIASEISGWVPENKGDVI----------------------LFDKGIIDTPNLA-----

Query:  -QLQRTQE-----------ARQGGLVFGIHNILEQLALSASMQEF--------AERQSHTFWNYVKRRDANLKKALEENFSKPYP
         Q + TQ+           +R  G +      LEQ      +Q++          +Q   FW Y K RD  LKKAL+ NF++P P
Subjt:  -QLQRTQE-----------ARQGGLVFGIHNILEQLALSASMQEF--------AERQSHTFWNYVKRRDANLKKALEENFSKPYP

A0A2P5CPE8 Uncharacterized protein1.5e-0939.58Show/hide
Query:  APSNEQLSDAVREVGVEGAQWRLSKTEKRTFQSAYLKREANTWMGFIKQRLLPTTHDSTVSRERVLLAFAILRSPSIDVGKIIASEISGWVPENKG
        A +  +L+  +  V + GA+W +S     T   + L   A  W  F+K RLLPTTH  TVS+ERVLL +++L   SI+VG+II  EI  +     G
Subjt:  APSNEQLSDAVREVGVEGAQWRLSKTEKRTFQSAYLKREANTWMGFIKQRLLPTTHDSTVSRERVLLAFAILRSPSIDVGKIIASEISGWVPENKG

A0A2P5DXM3 Uncharacterized protein1.2e-1431.58Show/hide
Query:  QLSDAVREVGVEGAQWRLSKTEKRTFQSAYLKREANTWMGFIKQRLLPTTHDSTVSRERVLLAFAILRSPSIDVGKIIASEISGWVPENKGDVI------
        +L   +  V   GA+W +S     T   + L   A  W  F+K RLLPTTH   VS++R+LL  ++L   SI+VG++I SEI     +  G +       
Subjt:  QLSDAVREVGVEGAQWRLSKTEKRTFQSAYLKREANTWMGFIKQRLLPTTHDSTVSRERVLLAFAILRSPSIDVGKIIASEISGWVPENKGDVI------

Query:  --------------LFDKGIIDTPNLAQL------QRTQE-----------ARQGGLVFGIHNILEQLALSASMQEFAERQSHTFWNYVKRRDANLKKAL
                      L + G ID   +A++      + TQ+           +R  G V      LEQ     S QE   +Q   FW Y K RD  LKKAL
Subjt:  --------------LFDKGIIDTPNLAQL------QRTQE-----------ARQGGLVFGIHNILEQLALSASMQEFAERQSHTFWNYVKRRDANLKKAL

Query:  EENFSKPYP
        + NF++P P
Subjt:  EENFSKPYP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTGGCGCCATCTAATGAGCAGTTGAGTGATGCTGTGAGGGAAGTTGGTGTTGAAGGGGCGCAGTGGAGACTTTCAAAAACTGAGAAAAGGACGTTTCAGTCAGC
CTATCTGAAGAGGGAAGCAAATACATGGATGGGGTTTATCAAACAAAGGTTGCTTCCAACGACTCATGACTCGACGGTTTCTAGGGAACGGGTTCTTCTGGCTTTCGCGA
TTTTGAGGTCTCCCAGCATTGATGTAGGGAAGATTATTGCTAGTGAAATATCTGGATGGGTTCCAGAGAATAAAGGTGATGTTATTTTATTTGACAAAGGGATCATCGAT
ACACCCAACTTGGCACAGCTTCAGCGTACGCAAGAGGCACGCCAGGGTGGGCTTGTTTTTGGAATTCACAACATTTTAGAACAACTTGCACTGTCAGCCAGCATGCAAGA
GTTTGCCGAGAGGCAATCTCACACTTTCTGGAACTATGTTAAACGTCGTGATGCCAACTTGAAGAAGGCGCTAGAAGAAAATTTTTCCAAACCATACCCTGTTGAGGATA
AGGCTGGGTACCTTATCCTGGTGACACTATGTGATACGGCCCACCTTGTATTCGATACAGATGCAATGATCCAAAGCATCCATGTAAGAGACATGCAGATTTGTATGGGT
GAGAGTGGCCAGTTCGCCGACTCAATAAGCCTACCATTTCAGGGGCAAGACCGAATGGGGGATGGGAACATAACAGTACAAGATGGAATTCACTCCTTCCCCTATTGGGG
TCCATTAGGTCCCACTGGAAAAGATCTTCCTTTTCCTATTAGGAAAAAGGTTTTGGCCTTTACTATATATAGGACCCCTGGGTGGGGTGAAAGGCATCCCATTCATTCTC
CTACTCTCAGAGAATTCCCCTCAAGGCTTCCTCTAGACTCCCACCAGTCTCCTGCCTCTAGAAGTCTCAGAGTCATACCGGTGACGGTTCAAGGCGGTTGGGCTGTCCGG
TTCACGCGGTCTGGCTGGGCTAGGACCGATTTGGTCCGGTTCAGCTGGAATTTGGCTCGGTTCGTGGTTTTCGTAGCTGGTTCGAAGTGGTTCGGGTCGGTTCGGGCGGT
CTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGTGGCGCCATCTAATGAGCAGTTGAGTGATGCTGTGAGGGAAGTTGGTGTTGAAGGGGCGCAGTGGAGACTTTCAAAAACTGAGAAAAGGACGTTTCAGTCAGC
CTATCTGAAGAGGGAAGCAAATACATGGATGGGGTTTATCAAACAAAGGTTGCTTCCAACGACTCATGACTCGACGGTTTCTAGGGAACGGGTTCTTCTGGCTTTCGCGA
TTTTGAGGTCTCCCAGCATTGATGTAGGGAAGATTATTGCTAGTGAAATATCTGGATGGGTTCCAGAGAATAAAGGTGATGTTATTTTATTTGACAAAGGGATCATCGAT
ACACCCAACTTGGCACAGCTTCAGCGTACGCAAGAGGCACGCCAGGGTGGGCTTGTTTTTGGAATTCACAACATTTTAGAACAACTTGCACTGTCAGCCAGCATGCAAGA
GTTTGCCGAGAGGCAATCTCACACTTTCTGGAACTATGTTAAACGTCGTGATGCCAACTTGAAGAAGGCGCTAGAAGAAAATTTTTCCAAACCATACCCTGTTGAGGATA
AGGCTGGGTACCTTATCCTGGTGACACTATGTGATACGGCCCACCTTGTATTCGATACAGATGCAATGATCCAAAGCATCCATGTAAGAGACATGCAGATTTGTATGGGT
GAGAGTGGCCAGTTCGCCGACTCAATAAGCCTACCATTTCAGGGGCAAGACCGAATGGGGGATGGGAACATAACAGTACAAGATGGAATTCACTCCTTCCCCTATTGGGG
TCCATTAGGTCCCACTGGAAAAGATCTTCCTTTTCCTATTAGGAAAAAGGTTTTGGCCTTTACTATATATAGGACCCCTGGGTGGGGTGAAAGGCATCCCATTCATTCTC
CTACTCTCAGAGAATTCCCCTCAAGGCTTCCTCTAGACTCCCACCAGTCTCCTGCCTCTAGAAGTCTCAGAGTCATACCGGTGACGGTTCAAGGCGGTTGGGCTGTCCGG
TTCACGCGGTCTGGCTGGGCTAGGACCGATTTGGTCCGGTTCAGCTGGAATTTGGCTCGGTTCGTGGTTTTCGTAGCTGGTTCGAAGTGGTTCGGGTCGGTTCGGGCGGT
CTAG
Protein sequenceShow/hide protein sequence
MAVAPSNEQLSDAVREVGVEGAQWRLSKTEKRTFQSAYLKREANTWMGFIKQRLLPTTHDSTVSRERVLLAFAILRSPSIDVGKIIASEISGWVPENKGDVILFDKGIID
TPNLAQLQRTQEARQGGLVFGIHNILEQLALSASMQEFAERQSHTFWNYVKRRDANLKKALEENFSKPYPVEDKAGYLILVTLCDTAHLVFDTDAMIQSIHVRDMQICMG
ESGQFADSISLPFQGQDRMGDGNITVQDGIHSFPYWGPLGPTGKDLPFPIRKKVLAFTIYRTPGWGERHPIHSPTLREFPSRLPLDSHQSPASRSLRVIPVTVQGGWAVR
FTRSGWARTDLVRFSWNLARFVVFVAGSKWFGSVRAV