; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg011084 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg011084
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationscaffold4:27396329..27404521
RNA-Seq ExpressionSpg011084
SyntenySpg011084
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MBA0761283.1 hypothetical protein [Gossypium trilobum]1.8e-0623.21Show/hide
Query:  ILKRGFLAERGFQ-SPFSQLPNVLQSKITNLGWDVFCKKADP------ATIQVVWEFYANISEEEAYANVWLELIRNRILPTTHDSTISMERILLTFAIM
        +LKR F  E+G   SP   L   +   I  L W+ F              + +   +  +         +W   +  R+ P+TH +TI+++R+ L  +I+
Subjt:  ILKRGFLAERGFQ-SPFSQLPNVLQSKITNLGWDVFCKKADP------ATIQVVWEFYANISEEEAYANVWLELIRNRILPTTHDSTISMERILLTFAIM

Query:  RNMNIDLG-----KIISMFRGEGWVAMFSDTISMPCKRAGVPIRKEDDILFDKGIIDAANVDRLMRGE
        +   ID+G     +I      +  + +F   + + C++ G+  R  +++L + G+I+ A+V+R+ RG+
Subjt:  RNMNIDLG-----KIISMFRGEGWVAMFSDTISMPCKRAGVPIRKEDDILFDKGIIDAANVDRLMRGE

PIN02048.1 hypothetical protein CDL12_25440 [Handroanthus impetiginosus]6.7e-0628.4Show/hide
Query:  RGFQSPF-----SQLPNVLQSKITNLGWDVFCKKA---DPATIQVVWEFYANISEE--EAYANVWLELIRNRILPTTHDSTISMERILLTFAIMRNMNID
        RG + PF     ++  N+   ++    ++ FC+K    D  T  +  + Y +      +  A +WL  I  R+LPT+H   ++ +R LL + IM    ID
Subjt:  RGFQSPF-----SQLPNVLQSKITNLGWDVFCKKA---DPATIQVVWEFYANISEE--EAYANVWLELIRNRILPTTHDSTISMERILLTFAIMRNMNID

Query:  LGKIIS--------MFRGEGWVAMFSDTISMPCKRAGVPIRKEDDILFDKGIIDAANVDRLM
        +GKIIS          R   W   F   I+  C RAGV   K ++++F + +ID   + R++
Subjt:  LGKIIS--------MFRGEGWVAMFSDTISMPCKRAGVPIRKEDDILFDKGIIDAANVDRLM

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.8e-1129.33Show/hide
Query:  NISEEEAY----------ANVWLELIRNRILPTTHDSTISMERILLTFAIMRNMNIDLGKII-SMFRG----EGWVAMFSDTISMPCKRAGVPIRKEDDI
        N+S + AY          A VW   +++R+LPTTH  T+S +R+LL  +++   +I++G++I S  R     +     F   I+  C+ A  P    ++ 
Subjt:  NISEEEAY----------ANVWLELIRNRILPTTHDSTISMERILLTFAIMRNMNIDLGKII-SMFRG----EGWVAMFSDTISMPCKRAGVPIRKEDDI

Query:  LFDKGIIDAANVDRL-MRGEGQQRQEGLMSGV---------HKVLDQLDVVVKR--------------TEHMEGQQQAYWLYAQWRDAILKKVMQVNFTQ
        L + G IDA  V R+   G  +  Q+   S             +L QL  + +R               +H   QQQ +W Y++ RD  LKK +Q NFT+
Subjt:  LFDKGIIDAANVDRL-MRGEGQQRQEGLMSGV---------HKVLDQLDVVVKR--------------TEHMEGQQQAYWLYAQWRDAILKKVMQVNFTQ

Query:  PYLPFPPF
        P   FP F
Subjt:  PYLPFPPF

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]4.8e-1230.37Show/hide
Query:  ANVWLELIRNRILPTTHDSTISMERILLTFAIMRNMNIDLGKII-SMFRG----EGWVAMFSDTISMPCKRAGVPIRKEDDILFDKGIIDAANVDRLMRG
        A VW   +++R+LPTTH  T+S +R+LL ++++   +I++G++I S  R     +     F   I+  C+ A  P    ++ L   G IDA  V R+ + 
Subjt:  ANVWLELIRNRILPTTHDSTISMERILLTFAIMRNMNIDLGKII-SMFRG----EGWVAMFSDTISMPCKRAGVPIRKEDDILFDKGIIDAANVDRLMRG

Query:  EGQ-----------------QRQEG----LMSGVHKVLDQLDV----VVKRTEHMEGQQQAYWLYAQWRDAILKKVMQVNFTQPYLPFPPF
        EGQ                  R  G     +  + + L Q +V    ++   +H   QQQ +W Y++ RD  LKK +Q NFT+P   FP F
Subjt:  EGQ-----------------QRQEG----LMSGVHKVLDQLDV----VVKRTEHMEGQQQAYWLYAQWRDAILKKVMQVNFTQPYLPFPPF

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]1.1e-1130.46Show/hide
Query:  NISEEEAY----------ANVWLELIRNRILPTTHDSTISMERILLTFAIMRNMNIDLGKII-SMFRG----EGWVAMFSDTISMPCKRAGVPIRKEDDI
        N+S + AY          A VW   +++R+LPTTH   +S +R+LL  +++   +I++G++I S  R     +     F   I+  C+ A  P    ++ 
Subjt:  NISEEEAY----------ANVWLELIRNRILPTTHDSTISMERILLTFAIMRNMNIDLGKII-SMFRG----EGWVAMFSDTISMPCKRAGVPIRKEDDI

Query:  LFDKGIIDAANVDRL-MRGEGQQRQEGLMS------------GVHKVLDQLDVVVKRTEHMEGQQQAYWLYAQWRDAILKKVMQVNFTQPYLPFPPF
        L + G IDA  V R+   G  +  Q+   S             V + L  L+  + + EH   QQQ +W Y++ RD  LKK +Q NFT+P   FP F
Subjt:  LFDKGIIDAANVDRL-MRGEGQQRQEGLMS------------GVHKVLDQLDVVVKRTEHMEGQQQAYWLYAQWRDAILKKVMQVNFTQPYLPFPPF

TrEMBL top hitse value%identityAlignment
A0A2G9G9R6 Uncharacterized protein3.2e-0628.4Show/hide
Query:  RGFQSPF-----SQLPNVLQSKITNLGWDVFCKKA---DPATIQVVWEFYANISEE--EAYANVWLELIRNRILPTTHDSTISMERILLTFAIMRNMNID
        RG + PF     ++  N+   ++    ++ FC+K    D  T  +  + Y +      +  A +WL  I  R+LPT+H   ++ +R LL + IM    ID
Subjt:  RGFQSPF-----SQLPNVLQSKITNLGWDVFCKKA---DPATIQVVWEFYANISEE--EAYANVWLELIRNRILPTTHDSTISMERILLTFAIMRNMNID

Query:  LGKIIS--------MFRGEGWVAMFSDTISMPCKRAGVPIRKEDDILFDKGIIDAANVDRLM
        +GKIIS          R   W   F   I+  C RAGV   K ++++F + +ID   + R++
Subjt:  LGKIIS--------MFRGEGWVAMFSDTISMPCKRAGVPIRKEDDILFDKGIIDAANVDRLM

A0A2P5BCG4 Uncharacterized protein (Fragment)8.8e-1229.33Show/hide
Query:  NISEEEAY----------ANVWLELIRNRILPTTHDSTISMERILLTFAIMRNMNIDLGKII-SMFRG----EGWVAMFSDTISMPCKRAGVPIRKEDDI
        N+S + AY          A VW   +++R+LPTTH  T+S +R+LL  +++   +I++G++I S  R     +     F   I+  C+ A  P    ++ 
Subjt:  NISEEEAY----------ANVWLELIRNRILPTTHDSTISMERILLTFAIMRNMNIDLGKII-SMFRG----EGWVAMFSDTISMPCKRAGVPIRKEDDI

Query:  LFDKGIIDAANVDRL-MRGEGQQRQEGLMSGV---------HKVLDQLDVVVKR--------------TEHMEGQQQAYWLYAQWRDAILKKVMQVNFTQ
        L + G IDA  V R+   G  +  Q+   S             +L QL  + +R               +H   QQQ +W Y++ RD  LKK +Q NFT+
Subjt:  LFDKGIIDAANVDRL-MRGEGQQRQEGLMSGV---------HKVLDQLDVVVKR--------------TEHMEGQQQAYWLYAQWRDAILKKVMQVNFTQ

Query:  PYLPFPPF
        P   FP F
Subjt:  PYLPFPPF

A0A2P5CEY2 Uncharacterized protein2.3e-1230.37Show/hide
Query:  ANVWLELIRNRILPTTHDSTISMERILLTFAIMRNMNIDLGKII-SMFRG----EGWVAMFSDTISMPCKRAGVPIRKEDDILFDKGIIDAANVDRLMRG
        A VW   +++R+LPTTH  T+S +R+LL ++++   +I++G++I S  R     +     F   I+  C+ A  P    ++ L   G IDA  V R+ + 
Subjt:  ANVWLELIRNRILPTTHDSTISMERILLTFAIMRNMNIDLGKII-SMFRG----EGWVAMFSDTISMPCKRAGVPIRKEDDILFDKGIIDAANVDRLMRG

Query:  EGQ-----------------QRQEG----LMSGVHKVLDQLDV----VVKRTEHMEGQQQAYWLYAQWRDAILKKVMQVNFTQPYLPFPPF
        EGQ                  R  G     +  + + L Q +V    ++   +H   QQQ +W Y++ RD  LKK +Q NFT+P   FP F
Subjt:  EGQ-----------------QRQEG----LMSGVHKVLDQLDV----VVKRTEHMEGQQQAYWLYAQWRDAILKKVMQVNFTQPYLPFPPF

A0A2P5DXM3 Uncharacterized protein5.1e-1230.46Show/hide
Query:  NISEEEAY----------ANVWLELIRNRILPTTHDSTISMERILLTFAIMRNMNIDLGKII-SMFRG----EGWVAMFSDTISMPCKRAGVPIRKEDDI
        N+S + AY          A VW   +++R+LPTTH   +S +R+LL  +++   +I++G++I S  R     +     F   I+  C+ A  P    ++ 
Subjt:  NISEEEAY----------ANVWLELIRNRILPTTHDSTISMERILLTFAIMRNMNIDLGKII-SMFRG----EGWVAMFSDTISMPCKRAGVPIRKEDDI

Query:  LFDKGIIDAANVDRL-MRGEGQQRQEGLMS------------GVHKVLDQLDVVVKRTEHMEGQQQAYWLYAQWRDAILKKVMQVNFTQPYLPFPPF
        L + G IDA  V R+   G  +  Q+   S             V + L  L+  + + EH   QQQ +W Y++ RD  LKK +Q NFT+P   FP F
Subjt:  LFDKGIIDAANVDRL-MRGEGQQRQEGLMS------------GVHKVLDQLDVVVKRTEHMEGQQQAYWLYAQWRDAILKKVMQVNFTQPYLPFPPF

A0A7J9DKN5 Uncharacterized protein8.5e-0723.21Show/hide
Query:  ILKRGFLAERGFQ-SPFSQLPNVLQSKITNLGWDVFCKKADP------ATIQVVWEFYANISEEEAYANVWLELIRNRILPTTHDSTISMERILLTFAIM
        +LKR F  E+G   SP   L   +   I  L W+ F              + +   +  +         +W   +  R+ P+TH +TI+++R+ L  +I+
Subjt:  ILKRGFLAERGFQ-SPFSQLPNVLQSKITNLGWDVFCKKADP------ATIQVVWEFYANISEEEAYANVWLELIRNRILPTTHDSTISMERILLTFAIM

Query:  RNMNIDLG-----KIISMFRGEGWVAMFSDTISMPCKRAGVPIRKEDDILFDKGIIDAANVDRLMRGE
        +   ID+G     +I      +  + +F   + + C++ G+  R  +++L + G+I+ A+V+R+ RG+
Subjt:  RNMNIDLG-----KIISMFRGEGWVAMFSDTISMPCKRAGVPIRKEDDILFDKGIIDAANVDRLMRGE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGTTCCCTTAAGTGGTGTCTCGGGTTTTGAACAAAGGGCCCTACCTTCTCACTGGCCCAAGAAGGGTTTTTTGATTGATGGTTTGACCACAAACAGGTTGTTCAT
TAAAGGAGCACTTGTACTTGAGGAGGTAGAGGGTGGGGTGAAAGGAATCTTATTCATTCTCCTACTCTCAGAAAATTCCCCTGAAGGCTCACACCAGTCTCCTGCCTCTA
AAAGTCTCAGAGTCATACCGGTGCCCGCTTCGATCCACTTGGGTCTTTTCACCTCTTCGTGGTTCAAGAACATCGAGACGGCTCCAAAACTCCCTAATTTGCCTGAATTA
ACACCAAATCGTGTGATTGGCTCCCCAATGACAGAAGCTCCAGCGAAGAAGAACGGTAAGAAAAAGCAAGTTGTGACCAAGGAACCCTCTGTTGTACAACATGCAAATAA
AAAGAAGCAAGAGCAAGCCATTGAGGAAGAGCATATTCCCTTAATTGAGAAGTTGAAAAAGAGAAAGAGGAAGGCCAAGCGAGTTGAAGTTGTTCCGGAGAATGAATTGT
CACCGCAAGTGGAGGAGCCAAGGAGCAAGGGAAAGGAAGCCTTGGTTTCGCAAGAAGCATCCGTGGAGCACTTCATCAATGAAGCCGCTAGAGCAAAGTATCAAGCTATT
CTTAAAAGAGGATTTCTTGCAGAAAGAGGATTTCAATCGCCATTCAGTCAACTTCCTAACGTTCTTCAATCAAAGATTACAAATCTTGGCTGGGATGTTTTTTGTAAGAA
AGCGGACCCTGCAACTATCCAAGTGGTTTGGGAATTTTATGCAAACATCAGTGAAGAGGAGGCCTATGCAAATGTGTGGCTGGAGCTGATTCGAAATCGAATTCTCCCAA
CAACTCATGACTCTACCATATCGATGGAGCGAATCCTGCTGACCTTTGCCATAATGAGAAATATGAACATTGACTTAGGAAAGATAATTTCTATGTTTAGGGGAGAAGGT
TGGGTGGCTATGTTTTCCGACACCATATCGATGCCGTGTAAGCGAGCCGGAGTTCCTATCCGAAAAGAAGATGACATCCTTTTTGATAAAGGGATCATTGATGCTGCAAA
CGTGGATAGGCTTATGAGAGGAGAAGGACAACAAAGACAAGAAGGGTTGATGTCGGGGGTTCACAAGGTTTTGGACCAGTTGGATGTGGTTGTGAAGCGAACTGAGCACA
TGGAAGGGCAACAACAAGCCTACTGGTTGTATGCTCAGTGGAGAGATGCAATTCTAAAGAAGGTGATGCAAGTCAACTTCACTCAACCGTACCTTCCATTCCCTCCATTT
TTAGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGTTCCCTTAAGTGGTGTCTCGGGTTTTGAACAAAGGGCCCTACCTTCTCACTGGCCCAAGAAGGGTTTTTTGATTGATGGTTTGACCACAAACAGGTTGTTCAT
TAAAGGAGCACTTGTACTTGAGGAGGTAGAGGGTGGGGTGAAAGGAATCTTATTCATTCTCCTACTCTCAGAAAATTCCCCTGAAGGCTCACACCAGTCTCCTGCCTCTA
AAAGTCTCAGAGTCATACCGGTGCCCGCTTCGATCCACTTGGGTCTTTTCACCTCTTCGTGGTTCAAGAACATCGAGACGGCTCCAAAACTCCCTAATTTGCCTGAATTA
ACACCAAATCGTGTGATTGGCTCCCCAATGACAGAAGCTCCAGCGAAGAAGAACGGTAAGAAAAAGCAAGTTGTGACCAAGGAACCCTCTGTTGTACAACATGCAAATAA
AAAGAAGCAAGAGCAAGCCATTGAGGAAGAGCATATTCCCTTAATTGAGAAGTTGAAAAAGAGAAAGAGGAAGGCCAAGCGAGTTGAAGTTGTTCCGGAGAATGAATTGT
CACCGCAAGTGGAGGAGCCAAGGAGCAAGGGAAAGGAAGCCTTGGTTTCGCAAGAAGCATCCGTGGAGCACTTCATCAATGAAGCCGCTAGAGCAAAGTATCAAGCTATT
CTTAAAAGAGGATTTCTTGCAGAAAGAGGATTTCAATCGCCATTCAGTCAACTTCCTAACGTTCTTCAATCAAAGATTACAAATCTTGGCTGGGATGTTTTTTGTAAGAA
AGCGGACCCTGCAACTATCCAAGTGGTTTGGGAATTTTATGCAAACATCAGTGAAGAGGAGGCCTATGCAAATGTGTGGCTGGAGCTGATTCGAAATCGAATTCTCCCAA
CAACTCATGACTCTACCATATCGATGGAGCGAATCCTGCTGACCTTTGCCATAATGAGAAATATGAACATTGACTTAGGAAAGATAATTTCTATGTTTAGGGGAGAAGGT
TGGGTGGCTATGTTTTCCGACACCATATCGATGCCGTGTAAGCGAGCCGGAGTTCCTATCCGAAAAGAAGATGACATCCTTTTTGATAAAGGGATCATTGATGCTGCAAA
CGTGGATAGGCTTATGAGAGGAGAAGGACAACAAAGACAAGAAGGGTTGATGTCGGGGGTTCACAAGGTTTTGGACCAGTTGGATGTGGTTGTGAAGCGAACTGAGCACA
TGGAAGGGCAACAACAAGCCTACTGGTTGTATGCTCAGTGGAGAGATGCAATTCTAAAGAAGGTGATGCAAGTCAACTTCACTCAACCGTACCTTCCATTCCCTCCATTT
TTAGATTAA
Protein sequenceShow/hide protein sequence
MSVPLSGVSGFEQRALPSHWPKKGFLIDGLTTNRLFIKGALVLEEVEGGVKGILFILLLSENSPEGSHQSPASKSLRVIPVPASIHLGLFTSSWFKNIETAPKLPNLPEL
TPNRVIGSPMTEAPAKKNGKKKQVVTKEPSVVQHANKKKQEQAIEEEHIPLIEKLKKRKRKAKRVEVVPENELSPQVEEPRSKGKEALVSQEASVEHFINEAARAKYQAI
LKRGFLAERGFQSPFSQLPNVLQSKITNLGWDVFCKKADPATIQVVWEFYANISEEEAYANVWLELIRNRILPTTHDSTISMERILLTFAIMRNMNIDLGKIISMFRGEG
WVAMFSDTISMPCKRAGVPIRKEDDILFDKGIIDAANVDRLMRGEGQQRQEGLMSGVHKVLDQLDVVVKRTEHMEGQQQAYWLYAQWRDAILKKVMQVNFTQPYLPFPPF
LD