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Spg011086 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg011086
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase
Genome locationscaffold4:28431900..28433148
RNA-Seq ExpressionSpg011086
SyntenySpg011086
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062407.1 uncharacterized protein E6C27_scaffold154G002090 [Cucumis melo var. makuwa]2.7e-0688.24Show/hide
Query:  MAEILSPRLYGTVCTQVEIELPVPDTLPTSAESS
        M EILS RLYGTVCTQV+IELP+PDTLPTSAESS
Subjt:  MAEILSPRLYGTVCTQVEIELPVPDTLPTSAESS

KAA0066851.1 reverse transcriptase [Cucumis melo var. makuwa]5.1e-0564.71Show/hide
Query:  MAEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESS
        M EILSPRLYGTVCTQ                 VEIELPVPDTLPTSAESS
Subjt:  MAEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESS

TYK27998.1 reverse transcriptase [Cucumis melo var. makuwa]5.1e-0564.71Show/hide
Query:  MAEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESS
        M EILSPRLYGTVCTQ                 VEIELPVPDTLPTSAESS
Subjt:  MAEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESS

TrEMBL top hitse value%identityAlignment
A0A5A7V638 Uncharacterized protein1.3e-0688.24Show/hide
Query:  MAEILSPRLYGTVCTQVEIELPVPDTLPTSAESS
        M EILS RLYGTVCTQV+IELP+PDTLPTSAESS
Subjt:  MAEILSPRLYGTVCTQVEIELPVPDTLPTSAESS

A0A5A7VMG9 Reverse transcriptase2.5e-0564.71Show/hide
Query:  MAEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESS
        M EILSPRLYGTVCTQ                 VEIELPVPDTLPTSAESS
Subjt:  MAEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESS

A0A5D3DX39 Reverse transcriptase2.5e-0564.71Show/hide
Query:  MAEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESS
        M EILSPRLYGTVCTQ                 VEIELPVPDTLPTSAESS
Subjt:  MAEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTACCAACGTCTGCTGAAAGTTCATCGTTTCA
GGAGGGTCAACAGGAATCATGCCACCACGTACCAACAGATGACGCAGGCAGAATCAGGACGAAACCGGTGAAACTGGAGGAACAGGAGGAATTCTCCCACCATTTTGCTC
CCTTCCACGATTCTGTGGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTACCAACGTCTGCTGAAAGTTCATCGTTTCA
GGAGGGTCAACAGGAATCATGCCACCACGTACCAACAGATGACGCAGGCAGAATCAGGACGAAACCGGTGAAACTGGAGGAACAGGAGGAATTCTCCCACCATTTTGCTC
CCTTCCACGATTCTGTGGATTAA
Protein sequenceShow/hide protein sequence
MAEILSPRLYGTVCTQVEIELPVPDTLPTSAESSSFQEGQQESCHHVPTDDAGRIRTKPVKLEEQEEFSHHFAPFHDSVD