; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg011135 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg011135
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionE3 ubiquitin-protein ligase COP1-like
Genome locationscaffold4:25402918..25404768
RNA-Seq ExpressionSpg011135
SyntenySpg011135
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON32444.1 hypothetical protein PanWU01x14_361130 [Parasponia andersonii]3.9e-0535.29Show/hide
Query:  HGWELFCSKPESLNAQVVREFYANIDKEDGLQVIVRGVEVDWSPGAINGLYNLQDFPHAAYNEMVVAPSNEQLSDAVREVGIDGA
        H W  FC+ PE     +VREFYA++   +   V VRG++V WS  AIN +Y L D P   ++E +   +  +L   +  +   GA
Subjt:  HGWELFCSKPESLNAQVVREFYANIDKEDGLQVIVRGVEVDWSPGAINGLYNLQDFPHAAYNEMVVAPSNEQLSDAVREVGIDGA

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]1.4e-0537.65Show/hide
Query:  HGWELFCSKPESLNAQVVREFYANIDKEDGLQVIVRGVEVDWSPGAINGLYNLQDFPHAAYNEMVVAPSNEQLSDAVREVGIDGA
        H W+ FC+ PE     +VREFYAN+       V VRGV+V WS  AIN ++ L D P   ++E +   +   L   +  V + GA
Subjt:  HGWELFCSKPESLNAQVVREFYANIDKEDGLQVIVRGVEVDWSPGAINGLYNLQDFPHAAYNEMVVAPSNEQLSDAVREVGIDGA

PON42276.1 hypothetical protein PanWU01x14_283280 [Parasponia andersonii]7.7e-0945.88Show/hide
Query:  HGWELFCSKPESLNAQVVREFYANIDKEDGLQVIVRGVEVDWSPGAINGLYNLQDFPHAAYNEMVVAPSNEQLSDAVREVGIDGA
        H W+LFC+ PE L A +VREFYAN+   D   V VRGV+V  S  AIN +Y L D P   ++E V A +  +L+  +  V I GA
Subjt:  HGWELFCSKPESLNAQVVREFYANIDKEDGLQVIVRGVEVDWSPGAINGLYNLQDFPHAAYNEMVVAPSNEQLSDAVREVGIDGA

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]6.1e-0637.65Show/hide
Query:  HGWELFCSKPESLNAQVVREFYANIDKEDGLQVIVRGVEVDWSPGAINGLYNLQDFPHAAYNEMVVAPSNEQLSDAVREVGIDGA
        H W+ FC+ PE     +VREFYAN+   +   V VRGV+V WS  AIN ++ L D P   ++E +   + + L   +  V   GA
Subjt:  HGWELFCSKPESLNAQVVREFYANIDKEDGLQVIVRGVEVDWSPGAINGLYNLQDFPHAAYNEMVVAPSNEQLSDAVREVGIDGA

PON85987.1 hypothetical protein TorRG33x02_181920, partial [Trema orientale]2.3e-0537.65Show/hide
Query:  HGWELFCSKPESLNAQVVREFYANIDKEDGLQVIVRGVEVDWSPGAINGLYNLQDFPHAAYNEMVVAPSNEQLSDAVREVGIDGA
        H W  FC+ PE     +VREFYAN+   +   V VRGV+V W+  AIN ++ L D P   ++E V   + ++L   +  V   GA
Subjt:  HGWELFCSKPESLNAQVVREFYANIDKEDGLQVIVRGVEVDWSPGAINGLYNLQDFPHAAYNEMVVAPSNEQLSDAVREVGIDGA

TrEMBL top hitse value%identityAlignment
A0A2P5A7C9 Uncharacterized protein1.9e-0535.29Show/hide
Query:  HGWELFCSKPESLNAQVVREFYANIDKEDGLQVIVRGVEVDWSPGAINGLYNLQDFPHAAYNEMVVAPSNEQLSDAVREVGIDGA
        H W  FC+ PE     +VREFYA++   +   V VRG++V WS  AIN +Y L D P   ++E +   +  +L   +  +   GA
Subjt:  HGWELFCSKPESLNAQVVREFYANIDKEDGLQVIVRGVEVDWSPGAINGLYNLQDFPHAAYNEMVVAPSNEQLSDAVREVGIDGA

A0A2P5AGA5 Uncharacterized protein (Fragment)6.6e-0637.65Show/hide
Query:  HGWELFCSKPESLNAQVVREFYANIDKEDGLQVIVRGVEVDWSPGAINGLYNLQDFPHAAYNEMVVAPSNEQLSDAVREVGIDGA
        H W+ FC+ PE     +VREFYAN+       V VRGV+V WS  AIN ++ L D P   ++E +   +   L   +  V + GA
Subjt:  HGWELFCSKPESLNAQVVREFYANIDKEDGLQVIVRGVEVDWSPGAINGLYNLQDFPHAAYNEMVVAPSNEQLSDAVREVGIDGA

A0A2P5B0K0 Uncharacterized protein3.7e-0945.88Show/hide
Query:  HGWELFCSKPESLNAQVVREFYANIDKEDGLQVIVRGVEVDWSPGAINGLYNLQDFPHAAYNEMVVAPSNEQLSDAVREVGIDGA
        H W+LFC+ PE L A +VREFYAN+   D   V VRGV+V  S  AIN +Y L D P   ++E V A +  +L+  +  V I GA
Subjt:  HGWELFCSKPESLNAQVVREFYANIDKEDGLQVIVRGVEVDWSPGAINGLYNLQDFPHAAYNEMVVAPSNEQLSDAVREVGIDGA

A0A2P5BCG4 Uncharacterized protein (Fragment)2.9e-0637.65Show/hide
Query:  HGWELFCSKPESLNAQVVREFYANIDKEDGLQVIVRGVEVDWSPGAINGLYNLQDFPHAAYNEMVVAPSNEQLSDAVREVGIDGA
        H W+ FC+ PE     +VREFYAN+   +   V VRGV+V WS  AIN ++ L D P   ++E +   + + L   +  V   GA
Subjt:  HGWELFCSKPESLNAQVVREFYANIDKEDGLQVIVRGVEVDWSPGAINGLYNLQDFPHAAYNEMVVAPSNEQLSDAVREVGIDGA

A0A2P5EK98 Uncharacterized protein (Fragment)1.1e-0537.65Show/hide
Query:  HGWELFCSKPESLNAQVVREFYANIDKEDGLQVIVRGVEVDWSPGAINGLYNLQDFPHAAYNEMVVAPSNEQLSDAVREVGIDGA
        H W  FC+ PE     +VREFYAN+   +   V VRGV+V W+  AIN ++ L D P   ++E V   + ++L   +  V   GA
Subjt:  HGWELFCSKPESLNAQVVREFYANIDKEDGLQVIVRGVEVDWSPGAINGLYNLQDFPHAAYNEMVVAPSNEQLSDAVREVGIDGA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGAAGTATCCAAACGTCGTCGCGTGAAGCGCAAGGCAGGACGCGTCAAGGTAGTCCGAACTGATACCCCCTCGCCTCCAACCACTGATTCTGAAAGAGAAAATGC
AGAGAGAGAGGAGCAGGAGAAGAAAGAAGCAGAGGATAAAGCAAGAGAGGAAGCAGAGAAAAAGGCTGAAGAAGAAAGATTGCGCAAGCAAAGGGCAGATAGGGGCAAGA
GTGTTGCTGCAGCATCGGAGGAACCTGACGAAATAGAAGAGCCACAGTTGCCGTATGTTCGCTTCGTCAACAATCTTGCCAGAGCAAAATATGCTGAGTTGCTGAAAATA
GACTTCCTGTTTGAGAGAGTATTCAATGGTGATCTTCCACATTTTCTGAGGGCCGGCATTACGAACCTGATGCGCAATTTGCTAACCGCAAGTGTACGGGTCAACTATGC
TCGCTATCAGAACCACGGCTGGGAGTTGTTTTGTTCAAAGCCGGAATCTCTGAATGCGCAGGTAGTGCGCGAGTTTTATGCAAATATTGACAAAGAAGACGGTCTCCAAG
TGATCGTTCGAGGTGTTGAGGTCGACTGGAGTCCTGGTGCTATTAACGGACTGTACAACCTTCAAGATTTCCCCCACGCAGCATATAATGAGATGGTTGTGGCGCCATCT
AATGAGCAGCTGAGCGACGCTGTGAGGGAAGTTGGTATTGATGGGGCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGGAAGTATCCAAACGTCGTCGCGTGAAGCGCAAGGCAGGACGCGTCAAGGTAGTCCGAACTGATACCCCCTCGCCTCCAACCACTGATTCTGAAAGAGAAAATGC
AGAGAGAGAGGAGCAGGAGAAGAAAGAAGCAGAGGATAAAGCAAGAGAGGAAGCAGAGAAAAAGGCTGAAGAAGAAAGATTGCGCAAGCAAAGGGCAGATAGGGGCAAGA
GTGTTGCTGCAGCATCGGAGGAACCTGACGAAATAGAAGAGCCACAGTTGCCGTATGTTCGCTTCGTCAACAATCTTGCCAGAGCAAAATATGCTGAGTTGCTGAAAATA
GACTTCCTGTTTGAGAGAGTATTCAATGGTGATCTTCCACATTTTCTGAGGGCCGGCATTACGAACCTGATGCGCAATTTGCTAACCGCAAGTGTACGGGTCAACTATGC
TCGCTATCAGAACCACGGCTGGGAGTTGTTTTGTTCAAAGCCGGAATCTCTGAATGCGCAGGTAGTGCGCGAGTTTTATGCAAATATTGACAAAGAAGACGGTCTCCAAG
TGATCGTTCGAGGTGTTGAGGTCGACTGGAGTCCTGGTGCTATTAACGGACTGTACAACCTTCAAGATTTCCCCCACGCAGCATATAATGAGATGGTTGTGGCGCCATCT
AATGAGCAGCTGAGCGACGCTGTGAGGGAAGTTGGTATTGATGGGGCGTAG
Protein sequenceShow/hide protein sequence
MSEVSKRRRVKRKAGRVKVVRTDTPSPPTTDSERENAEREEQEKKEAEDKAREEAEKKAEEERLRKQRADRGKSVAAASEEPDEIEEPQLPYVRFVNNLARAKYAELLKI
DFLFERVFNGDLPHFLRAGITNLMRNLLTASVRVNYARYQNHGWELFCSKPESLNAQVVREFYANIDKEDGLQVIVRGVEVDWSPGAINGLYNLQDFPHAAYNEMVVAPS
NEQLSDAVREVGIDGA