; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg011146 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg011146
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationscaffold4:29476679..29482064
RNA-Seq ExpressionSpg011146
SyntenySpg011146
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR005135 - Endonuclease/exonuclease/phosphatase
IPR025558 - Domain of unknown function DUF4283
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN74312.1 hypothetical protein VITISV_037520 [Vitis vinifera]1.2e-8624.41Show/hide
Query:  KFLTWNVRGLGSWKKRALIKKIIQQQNPGIVLIQETKKSLICSRIIKSLWSSSHIGWTSLDSVGASGGILIMWSEPEFSVKETIQGLFSLSIHIFMADNF
        K L+WN RGLGS KKR  +++ +  QNP +V+ QETK+ +   R++ S+W    + W +L + GASGGI+I+W   +F+  E + G FS+++ +   +  
Subjt:  KFLTWNVRGLGSWKKRALIKKIIQQQNPGIVLIQETKKSLICSRIIKSLWSSSHIGWTSLDSVGASGGILIMWSEPEFSVKETIQGLFSLSIHIFMADNF

Query:  SFWLSAIYGPSRHADRSKFWNELHDLAGFGGDNWILGGDFNVTRWSWEKSHGRPVTRSMRIFNQWIADYHLID-TPLQNGCYTWSSCGENHYCSLIDRFL
        SFWLS++YGP++   R  FW EL DL G     W +GGDFNV R   EK     +T +MR F+++I +  L+D  PL+N  +TWS+   +  C  +DRFL
Subjt:  SFWLSAIYGPSRHADRSKFWNELHDLAGFGGDNWILGGDFNVTRWSWEKSHGRPVTRSMRIFNQWIADYHLID-TPLQNGCYTWSSCGENHYCSLIDRFL

Query:  M-----------------------TDTCL-------------------------NKF----------GVARHGFMMKLKGLKSELRKWN-----------
                                +  CL                          KF          G   H FM KLK +KS+L++WN           
Subjt:  M-----------------------TDTCL-------------------------NKF----------GVARHGFMMKLKGLKSELRKWN-----------

Query:  -------------------------------------------------------------------LTQRSSAAQLPSLVSQ-----------------
                                                                            T R S   + SL+S+                 
Subjt:  -------------------------------------------------------------------LTQRSSAAQLPSLVSQ-----------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------LKLLDD-----MEDMDALANMFDIVKIFELASGLNINYSKSEVLGIHLEESELD
                                                      L+  DD        +D L N+  I+ +F   SGL IN  KS + GI+  +  L 
Subjt:  ----------------------------------------------LKLLDD-----MEDMDALANMFDIVKIFELASGLNINYSKSEVLGIHLEESELD

Query:  WLMTTFGCKQGIWPSTYLGLPLGGSSKTIPFWQPVIERIQHKLHSWKYSYISKGGRHTLSQAVLSSMPIYYLSLFKLPGKVAKTLDKLFRDFFWEGSRGD
         L     C+   WP +YLGLPLGG+ KTI FW PV+ERI  +L  WK +Y+S GGR TL Q+ LS +P Y+LSLFK+P  +A  ++K+ RDF W G+   
Subjt:  WLMTTFGCKQGIWPSTYLGLPLGGSSKTIPFWQPVIERIQHKLHSWKYSYISKGGRHTLSQAVLSSMPIYYLSLFKLPGKVAKTLDKLFRDFFWEGSRGD

Query:  GGMHNINWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWHKLIVAKYYNSELPSLW-PSIIQKSSHKSPWRFITSTIDLVSSRVKRRLGNG
           H I W  V  P  MGG+G G    RN ALL KW+WRF  E + LWHK+I + Y     P+ W  +++ + SH+ PW+ I       S  V+  +GNG
Subjt:  GGMHNINWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWHKLIVAKYYNSELPSLW-PSIIQKSSHKSPWRFITSTIDLVSSRVKRRLGNG

Query:  LDTSFWHDSWLSCGVLATNFPRLYRLTDPPRSLVGETWIAS-QTAWDVSLRRNLNDVETEEWMALSLILSSISLQ-NCNDSWIWPLESSNIFS-------
            FW D W     L   F  LYR++      V      S   +W+ + RRNL D E +    L   L S+ L  +  DS  W L SS  FS       
Subjt:  LDTSFWHDSWLSCGVLATNFPRLYRLTDPPRSLVGETWIAS-QTAWDVSLRRNLNDVETEEWMALSLILSSISLQ-NCNDSWIWPLESSNIFS-------

Query:  -------------------------------LSHGAINTADRLQRRMPHFHLSPSWCIMCAASSEHSRHLFVHCTFASRYWSEILDAFGWSTVFPNCIKD
                                       ++HG +NT D+LQ R P+  L P WCI+C  + E   HLF+HC      W  + +  G   V P  I+D
Subjt:  -------------------------------LSHGAINTADRLQRRMPHFHLSPSWCIMCAASSEHSRHLFVHCTFASRYWSEILDAFGWSTVFPNCIKD

Query:  VLTLIF
        +L + F
Subjt:  VLTLIF

RVW15385.1 putative ribonuclease H protein [Vitis vinifera]6.9e-8725.61Show/hide
Query:  WNVRGLGSWKKRALIKKIIQQQNPGIVLIQETKKSLICSRIIKSLWSSSHIGWTSLDSVGASGGILIMWSEPEFSVKETIQGLFSLSIHIFMADNFSFWL
        WN RGLGS KKR  +++ +  QNP +V++QETK+ +   R++ S+W    + W +L + GASGGI+I+W   +F+  E + G FS+++ +   +  SFWL
Subjt:  WNVRGLGSWKKRALIKKIIQQQNPGIVLIQETKKSLICSRIIKSLWSSSHIGWTSLDSVGASGGILIMWSEPEFSVKETIQGLFSLSIHIFMADNFSFWL

Query:  SAIYGPSRHADRSKFWNELHDLAGFGGDNWILGGDFNVTRWSWEKSHGRPVTRSMRIFNQ----------WIADYHLIDTPLQNGCYTWSSCGENHYCSL
        +++YGP++   R  FW EL DL G     W +GGDFNV R   EK     +T +MR F++          W +D+  I   L+   + W   G   +   
Subjt:  SAIYGPSRHADRSKFWNELHDLAGFGGDNWILGGDFNVTRWSWEKSHGRPVTRSMRIFNQ----------WIADYHLIDTPLQNGCYTWSSCGENHYCSL

Query:  IDRFLMTDTCLNKF----------GVARHGFMMKLKGLKSELRKWNL-----------------------------------------------------
         + +L+      KF          G   H FM KLK +KS+L++WN                                                      
Subjt:  IDRFLMTDTCLNKF----------GVARHGFMMKLKGLKSELRKWNL-----------------------------------------------------

Query:  ---------------------------------------------------------------------------------TQRSSAAQLP---------
                                                                                         T  +  A +P         
Subjt:  ---------------------------------------------------------------------------------TQRSSAAQLP---------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------------------------SLVSQLKLLDD-----MEDMDALANMFDIVKIFELASGLNINYSKSEVLGIHLEESELDWLM
                                              + VS L+  DD        +D L N+  I+ +F   SGL IN  KS + GI+  +  L  L 
Subjt:  --------------------------------------SLVSQLKLLDD-----MEDMDALANMFDIVKIFELASGLNINYSKSEVLGIHLEESELDWLM

Query:  TTFGCKQGIWPSTYLGLPLGGSSKTIPFWQPVIERIQHKLHSWKYSYISKGGRHTLSQAVLSSMPIYYLSLFKLPGKVAKTLDKLFRDFFWEGSRGDGGM
            C+   WP +YLGLPLGG+ KTI FW PV+ERI  +L  WK +Y+S GGR TL Q+ LS +P Y+LSLFK+P  +A  ++K+ RDF W G+      
Subjt:  TTFGCKQGIWPSTYLGLPLGGSSKTIPFWQPVIERIQHKLHSWKYSYISKGGRHTLSQAVLSSMPIYYLSLFKLPGKVAKTLDKLFRDFFWEGSRGDGGM

Query:  HNINWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWHKLIVAKYYNSELPSLW-PSIIQKSSHKSPWRFITSTIDLVSSRVKRRLGNGLDT
        H I W  V  P  MGG+G G    RN ALL KW+WRF  E + LWHK+I + Y     P+ W  +++ + SH+ PW+ I       S  V+  +GNG   
Subjt:  HNINWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWHKLIVAKYYNSELPSLW-PSIIQKSSHKSPWRFITSTIDLVSSRVKRRLGNGLDT

Query:  SFWHDSWLSCGVLATNFPRLYRLTDPPRSLVGETWIAS-QTAWDVSLRRNLNDVETEEWMALSLILSSISLQN---------CNDSWIWPLE-----SSN
         FW D W     L   F  LYR+       V      S   +W+ + RRNL D E +    L   L S+ L           C   ++W  +      + 
Subjt:  SFWHDSWLSCGVLATNFPRLYRLTDPPRSLVGETWIAS-QTAWDVSLRRNLNDVETEEWMALSLILSSISLQN---------CNDSWIWPLE-----SSN

Query:  IFSLSHGAINTADRLQRRMPHFHLSPSWCIMCAASSEHSRHLFVHCTFASRYWSEILDAFGWSTVFPNCIKDVLTL
         + ++HG +NT D+LQ R P+  L P WCI+C  + E   HLF+HC      W  + +  G   V P  I+D+L +
Subjt:  IFSLSHGAINTADRLQRRMPHFHLSPSWCIMCAASSEHSRHLFVHCTFASRYWSEILDAFGWSTVFPNCIKDVLTL

RVW25634.1 putative ribonuclease H protein [Vitis vinifera]1.1e-8726.23Show/hide
Query:  RGLGSWKKRALIKKIIQQQNPGIVLIQETKKSLICSRIIKSLWSSSHIGWTSLDSVGASGGILIMWSEPEFSVKETIQGLFSLSIHIFMADNFSFWLSAI
        +G G  +KR ++K  ++ + P +V+ QETKK     R + S+W++ +  W +L + GASGGILI+W   + S +E + G FS+SI   +    S WLSA+
Subjt:  RGLGSWKKRALIKKIIQQQNPGIVLIQETKKSLICSRIIKSLWSSSHIGWTSLDSVGASGGILIMWSEPEFSVKETIQGLFSLSIHIFMADNFSFWLSAI

Query:  YGPSRHADRSKFWNELHDLAGFGGDNWILGGDFNVTRWSWEKSHGRPVTRSMRIFNQWIADYHLIDTPLQNGCYTWSSCGENHYCSLIDRFLMTDTCLNK
        YGP+  A R   W EL D+AG     W +GGDFNV R S EK  G  +T SM+ F+ +I+D  LID PL++  +TWS+   N  C  +DRFL ++     
Subjt:  YGPSRHADRSKFWNELHDLAGFGGDNWILGGDFNVTRWSWEKSHGRPVTRSMRIFNQWIADYHLIDTPLQNGCYTWSSCGENHYCSLIDRFLMTDTCLNK

Query:  FGVARHGFMMK----------------------------------------------------LKGLKSELRK--------------------WNLTQRS
        F  +  G + +                                                     K +K E+ +                    W+     
Subjt:  FGVARHGFMMK----------------------------------------------------LKGLKSELRK--------------------WNLTQRS

Query:  SAAQLP----------------------------------------------------------------------------------SLVSQL------
        SA +L                                                                                   SL++ L      
Subjt:  SAAQLP----------------------------------------------------------------------------------SLVSQL------

Query:  -------------------------KLLDDM---------------------------------------------------------------------
                                 ++LD +                                                                     
Subjt:  -------------------------KLLDDM---------------------------------------------------------------------

Query:  ---------EDMDALANMFDIVKIFELASGLNINYSKSEVLGIHLEESELDWLMTTFGCKQGIWPSTYLGLPLGGSSKTIPFWQPVIERIQHKLHSWKYS
                 EDM  L N   ++ +F   SGL +N  KS + GI+LE++ L  L     CK   WP  YLGLPLGG+ KT  FW PVIERI  +L  W+ +
Subjt:  ---------EDMDALANMFDIVKIFELASGLNINYSKSEVLGIHLEESELDWLMTTFGCKQGIWPSTYLGLPLGGSSKTIPFWQPVIERIQHKLHSWKYS

Query:  YISKGGRHTLSQAVLSSMPIYYLSLFKLPGKVAKTLDKLFRDFFWEGSRGDGGMHNINWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWH
        Y+S GGR TL Q+ L+ MP Y+LSLFK+P  VA  ++++ RDF W G       H +NW  V  P   GG+G G    RN+ALL KW+WR+  E ++LWH
Subjt:  YISKGGRHTLSQAVLSSMPIYYLSLFKLPGKVAKTLDKLFRDFFWEGSRGDGGMHNINWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWH

Query:  KLIVAKYYNSELPSLWPSIIQKSSHKSPWRFITSTIDLVSSRVKRRLGNGLDTSFWHDSWLSCGVLATNFPRLYR-LTD---PPRSLVGETWIASQTAWD
        ++I++  Y S       +   + SH+ PW+ I       S   +  +GNG    FW D W     L   +PRL R +TD   P  S++G T      +W+
Subjt:  KLIVAKYYNSELPSLWPSIIQKSSHKSPWRFITSTIDLVSSRVKRRLGNGLDTSFWHDSWLSCGVLATNFPRLYR-LTD---PPRSLVGETWIASQTAWD

Query:  VSLRRNLNDVETEEWMALSLILSSISL-QNCNDSWIWPLESSNIFS--------------------------------------LSHGAINTADRLQRRM
         + RRNL+D E E+   L      + +  +  D   W L SS +F+                                      ++H  +NT D LQ R 
Subjt:  VSLRRNLNDVETEEWMALSLILSSISL-QNCNDSWIWPLESSNIFS--------------------------------------LSHGAINTADRLQRRM

Query:  PHFHLSPSWCIMCAASSEHSRHLFVHCTFASRYWSEILDAFGWSTVFPNCIKDVLTLIFVDHPFCGEKKILW
        P+  LSP  C +C    E   HLF+HC+     W  +  +     V P  I D+L   F    F     +LW
Subjt:  PHFHLSPSWCIMCAASSEHSRHLFVHCTFASRYWSEILDAFGWSTVFPNCIKDVLTLIFVDHPFCGEKKILW

RVW64408.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]1.9e-8423.6Show/hide
Query:  YMKFLTWNVRGLGSWKKRALIKKIIQQQNPGIVLIQETKKSLICSRIIKSLWSSSHIGWTSLDSVGASGGILIMWSEPEFSVKETIQGLFSLSIHIFMAD
        YMK L+WN RGLGS KKR ++++ +  QNP IV++QETK+     R + S+W    + W +L + GASGGI+I+W   +    E + G FS+++     +
Subjt:  YMKFLTWNVRGLGSWKKRALIKKIIQQQNPGIVLIQETKKSLICSRIIKSLWSSSHIGWTSLDSVGASGGILIMWSEPEFSVKETIQGLFSLSIHIFMAD

Query:  NFSFWLSAIYGPSRHADRSKFWNELHDLAGFGGDNWILGGDFNVTRWSWEKSHGRPVTRSMRIFNQWIADYHLIDTPLQNGCYTWSSCGENHYCSLIDRF
          SFWL+++YGP     R  FW EL DL G     W +GGDFNV R   EK     +T +MR F+++I +  LID PL+N  +TWS+   +  C  +DRF
Subjt:  NFSFWLSAIYGPSRHADRSKFWNELHDLAGFGGDNWILGGDFNVTRWSWEKSHGRPVTRSMRIFNQWIADYHLIDTPLQNGCYTWSSCGENHYCSLIDRF

Query:  LMT---DT--------------------CL-------------------------NKF----------GVARHGFMMKLKGLKSELRKWNL---------
        L +   DT                    CL                          KF          G   H FM KLK +KS+L++WN+         
Subjt:  LMT---DT--------------------CL-------------------------NKF----------GVARHGFMMKLKGLKSELRKWNL---------

Query:  ---------------------------------------------------------------------TQRSSAAQLPSLVSQL-KLLDDMED------
                                                                             T R S   + SL+S+  + L+++ED      
Subjt:  ---------------------------------------------------------------------TQRSSAAQLPSLVSQL-KLLDDMED------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------------------------------------------------------------------------------------MD
                                                                                                          M+
Subjt:  --------------------------------------------------------------------------------------------------MD

Query:  ALANMFDIVKIFELASGLNINYSKSEVLGIHLEESELDWLMTTFGCKQGIWPSTYLGLPLGGSSKTIPFWQPVIERIQHKLHSWKYSYISKGGRHTLSQA
         L N+  I+ +F   SGL IN  KS + GI+  +  L  L + F C+   WP +YLGLPLGG+ KTI FW PV+ERI  +L  WK +Y+S GGR TL Q+
Subjt:  ALANMFDIVKIFELASGLNINYSKSEVLGIHLEESELDWLMTTFGCKQGIWPSTYLGLPLGGSSKTIPFWQPVIERIQHKLHSWKYSYISKGGRHTLSQA

Query:  VLSSMPIYYLSLFKLPGKVAKTLDKLFRDFFWEGSRGDGGMHNINWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWHKLIVAKYYNSELP
         LS +P Y+LSLFK+P  +A  ++K+ R+F W G+      H + W  V  P  +GG+G G    RN+ALL KW+WRF  E + LW+K+I + Y     P
Subjt:  VLSSMPIYYLSLFKLPGKVAKTLDKLFRDFFWEGSRGDGGMHNINWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWHKLIVAKYYNSELP

Query:  SLW-PSIIQKSSHKSPWRFITSTIDLVSSRVKRRLGNGLDTSFWHDSWLSCGVLATNFPRLYRLTDPPRSLVGETWIAS-QTAWDVSLRRNLNDVETEEW
        + W  +++ + SH+ PW+ I       S  V+  +GNG    FW D W     L + F  LYR+       V      S   AW+++ RRNL D E +  
Subjt:  SLW-PSIIQKSSHKSPWRFITSTIDLVSSRVKRRLGNGLDTSFWHDSWLSCGVLATNFPRLYRLTDPPRSLVGETWIAS-QTAWDVSLRRNLNDVETEEW

Query:  MALSLILSSIS-LQNCNDSWIWPLESSNIFS--------------------------------------LSHGAINTADRLQRRMPHFHLSPSWCIMCAA
          L   LSS+    +  DS  W L SS +F+                                      ++HG +NT D+LQ R P+  L P WCI+C  
Subjt:  MALSLILSSIS-LQNCNDSWIWPLESSNIFS--------------------------------------LSHGAINTADRLQRRMPHFHLSPSWCIMCAA

Query:  SSEHSRHLFVHCTFASRYWSEILDAFGWSTVFPNCIKDVLTLIFVDHPFCGEKKILW
        + E   HLF+HC      W+++    G   V P   +D+L + F         K LW
Subjt:  SSEHSRHLFVHCTFASRYWSEILDAFGWSTVFPNCIKDVLTLIFVDHPFCGEKKILW

RVX11537.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]1.4e-8423.98Show/hide
Query:  KFLTWNVRGLGSWKKRALIKKIIQQQNPGIVLIQETKKSLICSRIIKSLWSSSHIGWTSLDSVGASGGILIMWSEPEFSVKETIQGLFSLSIHIFMADNF
        K L+WN RGLGS KKR ++++ +  QNP IV++QETK+     R + S+W    + W +L + GA GGI+I+W   +F   E + G FS+++     +  
Subjt:  KFLTWNVRGLGSWKKRALIKKIIQQQNPGIVLIQETKKSLICSRIIKSLWSSSHIGWTSLDSVGASGGILIMWSEPEFSVKETIQGLFSLSIHIFMADNF

Query:  SFWLSAIYGPSRHADRSKFWNELHDLAGFGGDNWILGGDFNVTRWSWEKSHGRPVTRSMRIFNQWIADYHLIDTPLQNGCYTWSSCGENHYCSLIDRFLM
        S WL+++YGP     R  FW EL DL G     W +GGDFNV R   EK     +T +MR F+++I +  L+D PL+N  +TWS+   +  C  +DRFL 
Subjt:  SFWLSAIYGPSRHADRSKFWNELHDLAGFGGDNWILGGDFNVTRWSWEKSHGRPVTRSMRIFNQWIADYHLIDTPLQNGCYTWSSCGENHYCSLIDRFLM

Query:  T---DT--------------------CL-------------------------NKF----------GVARHGFMMKLKGLKSELRKWN------------
        +   DT                    CL                          KF          G   H FM KLK +KS+L++WN            
Subjt:  T---DT--------------------CL-------------------------NKF----------GVARHGFMMKLKGLKSELRKWN------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------------------------LTQRSSAAQLPSLVSQLKLLDD-----MEDMDALANMFDIVKIFELASGLNINYSKSEVLGIHLEESELDWLMTT
                                 LT+  S  +  + VS L+  DD        M+ L N+  I+ +F   SGL IN  KS + GI+  +  L  L + 
Subjt:  -------------------------LTQRSSAAQLPSLVSQLKLLDD-----MEDMDALANMFDIVKIFELASGLNINYSKSEVLGIHLEESELDWLMTT

Query:  FGCKQGIWPSTYLGLPLGGSSKTIPFWQPVIERIQHKLHSWKYSYISKGGRHTLSQAVLSSMPIYYLSLFKLPGKVAKTLDKLFRDFFWEGSRGDGGMHN
        F C+   WP +YLGLPLGG+ KTI FW PV+ERI  +L  WK +Y+S GGR TL Q+ LS +P Y+LSLFK+P  +A  ++K+ R+F W  +      H 
Subjt:  FGCKQGIWPSTYLGLPLGGSSKTIPFWQPVIERIQHKLHSWKYSYISKGGRHTLSQAVLSSMPIYYLSLFKLPGKVAKTLDKLFRDFFWEGSRGDGGMHN

Query:  INWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWHKLIVAKYYNSELPSLW-PSIIQKSSHKSPWRFITSTIDLVSSRVKRRLGNGLDTSF
        + W  V  P  +GG+G G    RN+ALL KW+WRF  E + LW+K+I + Y     P+ W  +++ + SH+ PW+ I       S  V+  +GNG    F
Subjt:  INWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWHKLIVAKYYNSELPSLW-PSIIQKSSHKSPWRFITSTIDLVSSRVKRRLGNGLDTSF

Query:  WHDSWLSCGVLATNFPRLYRLTDPPRSLVGETWIAS-QTAWDVSLRRNLNDVETEEWMALSLILSSISLQ-NCNDSWIWPLESSNIFS------------
        W D W     L + F  LYR+       V      S   AW+++ RRNL D E +    L   LSS+    +  DS  W L SS +F+            
Subjt:  WHDSWLSCGVLATNFPRLYRLTDPPRSLVGETWIAS-QTAWDVSLRRNLNDVETEEWMALSLILSSISLQ-NCNDSWIWPLESSNIFS------------

Query:  --------------------------LSHGAINTADRLQRRMPHFHLSPSWCIMCAASSEHSRHLFVHCTFASRYWSEILDAFGWSTVFPNCIKDVLTLI
                                  ++HG +NT D+LQ R P+  L P WCI+C  + E   HLF+HC      W+++    G   V P   +D+L + 
Subjt:  --------------------------LSHGAINTADRLQRRMPHFHLSPSWCIMCAASSEHSRHLFVHCTFASRYWSEILDAFGWSTVFPNCIKDVLTLI

Query:  F
        F
Subjt:  F

TrEMBL top hitse value%identityAlignment
A0A438BWL9 Putative ribonuclease H protein3.3e-8725.61Show/hide
Query:  WNVRGLGSWKKRALIKKIIQQQNPGIVLIQETKKSLICSRIIKSLWSSSHIGWTSLDSVGASGGILIMWSEPEFSVKETIQGLFSLSIHIFMADNFSFWL
        WN RGLGS KKR  +++ +  QNP +V++QETK+ +   R++ S+W    + W +L + GASGGI+I+W   +F+  E + G FS+++ +   +  SFWL
Subjt:  WNVRGLGSWKKRALIKKIIQQQNPGIVLIQETKKSLICSRIIKSLWSSSHIGWTSLDSVGASGGILIMWSEPEFSVKETIQGLFSLSIHIFMADNFSFWL

Query:  SAIYGPSRHADRSKFWNELHDLAGFGGDNWILGGDFNVTRWSWEKSHGRPVTRSMRIFNQ----------WIADYHLIDTPLQNGCYTWSSCGENHYCSL
        +++YGP++   R  FW EL DL G     W +GGDFNV R   EK     +T +MR F++          W +D+  I   L+   + W   G   +   
Subjt:  SAIYGPSRHADRSKFWNELHDLAGFGGDNWILGGDFNVTRWSWEKSHGRPVTRSMRIFNQ----------WIADYHLIDTPLQNGCYTWSSCGENHYCSL

Query:  IDRFLMTDTCLNKF----------GVARHGFMMKLKGLKSELRKWNL-----------------------------------------------------
         + +L+      KF          G   H FM KLK +KS+L++WN                                                      
Subjt:  IDRFLMTDTCLNKF----------GVARHGFMMKLKGLKSELRKWNL-----------------------------------------------------

Query:  ---------------------------------------------------------------------------------TQRSSAAQLP---------
                                                                                         T  +  A +P         
Subjt:  ---------------------------------------------------------------------------------TQRSSAAQLP---------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------------------------SLVSQLKLLDD-----MEDMDALANMFDIVKIFELASGLNINYSKSEVLGIHLEESELDWLM
                                              + VS L+  DD        +D L N+  I+ +F   SGL IN  KS + GI+  +  L  L 
Subjt:  --------------------------------------SLVSQLKLLDD-----MEDMDALANMFDIVKIFELASGLNINYSKSEVLGIHLEESELDWLM

Query:  TTFGCKQGIWPSTYLGLPLGGSSKTIPFWQPVIERIQHKLHSWKYSYISKGGRHTLSQAVLSSMPIYYLSLFKLPGKVAKTLDKLFRDFFWEGSRGDGGM
            C+   WP +YLGLPLGG+ KTI FW PV+ERI  +L  WK +Y+S GGR TL Q+ LS +P Y+LSLFK+P  +A  ++K+ RDF W G+      
Subjt:  TTFGCKQGIWPSTYLGLPLGGSSKTIPFWQPVIERIQHKLHSWKYSYISKGGRHTLSQAVLSSMPIYYLSLFKLPGKVAKTLDKLFRDFFWEGSRGDGGM

Query:  HNINWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWHKLIVAKYYNSELPSLW-PSIIQKSSHKSPWRFITSTIDLVSSRVKRRLGNGLDT
        H I W  V  P  MGG+G G    RN ALL KW+WRF  E + LWHK+I + Y     P+ W  +++ + SH+ PW+ I       S  V+  +GNG   
Subjt:  HNINWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWHKLIVAKYYNSELPSLW-PSIIQKSSHKSPWRFITSTIDLVSSRVKRRLGNGLDT

Query:  SFWHDSWLSCGVLATNFPRLYRLTDPPRSLVGETWIAS-QTAWDVSLRRNLNDVETEEWMALSLILSSISLQN---------CNDSWIWPLE-----SSN
         FW D W     L   F  LYR+       V      S   +W+ + RRNL D E +    L   L S+ L           C   ++W  +      + 
Subjt:  SFWHDSWLSCGVLATNFPRLYRLTDPPRSLVGETWIAS-QTAWDVSLRRNLNDVETEEWMALSLILSSISLQN---------CNDSWIWPLE-----SSN

Query:  IFSLSHGAINTADRLQRRMPHFHLSPSWCIMCAASSEHSRHLFVHCTFASRYWSEILDAFGWSTVFPNCIKDVLTL
         + ++HG +NT D+LQ R P+  L P WCI+C  + E   HLF+HC      W  + +  G   V P  I+D+L +
Subjt:  IFSLSHGAINTADRLQRRMPHFHLSPSWCIMCAASSEHSRHLFVHCTFASRYWSEILDAFGWSTVFPNCIKDVLTL

A0A438CR03 Putative ribonuclease H protein5.1e-8826.23Show/hide
Query:  RGLGSWKKRALIKKIIQQQNPGIVLIQETKKSLICSRIIKSLWSSSHIGWTSLDSVGASGGILIMWSEPEFSVKETIQGLFSLSIHIFMADNFSFWLSAI
        +G G  +KR ++K  ++ + P +V+ QETKK     R + S+W++ +  W +L + GASGGILI+W   + S +E + G FS+SI   +    S WLSA+
Subjt:  RGLGSWKKRALIKKIIQQQNPGIVLIQETKKSLICSRIIKSLWSSSHIGWTSLDSVGASGGILIMWSEPEFSVKETIQGLFSLSIHIFMADNFSFWLSAI

Query:  YGPSRHADRSKFWNELHDLAGFGGDNWILGGDFNVTRWSWEKSHGRPVTRSMRIFNQWIADYHLIDTPLQNGCYTWSSCGENHYCSLIDRFLMTDTCLNK
        YGP+  A R   W EL D+AG     W +GGDFNV R S EK  G  +T SM+ F+ +I+D  LID PL++  +TWS+   N  C  +DRFL ++     
Subjt:  YGPSRHADRSKFWNELHDLAGFGGDNWILGGDFNVTRWSWEKSHGRPVTRSMRIFNQWIADYHLIDTPLQNGCYTWSSCGENHYCSLIDRFLMTDTCLNK

Query:  FGVARHGFMMK----------------------------------------------------LKGLKSELRK--------------------WNLTQRS
        F  +  G + +                                                     K +K E+ +                    W+     
Subjt:  FGVARHGFMMK----------------------------------------------------LKGLKSELRK--------------------WNLTQRS

Query:  SAAQLP----------------------------------------------------------------------------------SLVSQL------
        SA +L                                                                                   SL++ L      
Subjt:  SAAQLP----------------------------------------------------------------------------------SLVSQL------

Query:  -------------------------KLLDDM---------------------------------------------------------------------
                                 ++LD +                                                                     
Subjt:  -------------------------KLLDDM---------------------------------------------------------------------

Query:  ---------EDMDALANMFDIVKIFELASGLNINYSKSEVLGIHLEESELDWLMTTFGCKQGIWPSTYLGLPLGGSSKTIPFWQPVIERIQHKLHSWKYS
                 EDM  L N   ++ +F   SGL +N  KS + GI+LE++ L  L     CK   WP  YLGLPLGG+ KT  FW PVIERI  +L  W+ +
Subjt:  ---------EDMDALANMFDIVKIFELASGLNINYSKSEVLGIHLEESELDWLMTTFGCKQGIWPSTYLGLPLGGSSKTIPFWQPVIERIQHKLHSWKYS

Query:  YISKGGRHTLSQAVLSSMPIYYLSLFKLPGKVAKTLDKLFRDFFWEGSRGDGGMHNINWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWH
        Y+S GGR TL Q+ L+ MP Y+LSLFK+P  VA  ++++ RDF W G       H +NW  V  P   GG+G G    RN+ALL KW+WR+  E ++LWH
Subjt:  YISKGGRHTLSQAVLSSMPIYYLSLFKLPGKVAKTLDKLFRDFFWEGSRGDGGMHNINWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWH

Query:  KLIVAKYYNSELPSLWPSIIQKSSHKSPWRFITSTIDLVSSRVKRRLGNGLDTSFWHDSWLSCGVLATNFPRLYR-LTD---PPRSLVGETWIASQTAWD
        ++I++  Y S       +   + SH+ PW+ I       S   +  +GNG    FW D W     L   +PRL R +TD   P  S++G T      +W+
Subjt:  KLIVAKYYNSELPSLWPSIIQKSSHKSPWRFITSTIDLVSSRVKRRLGNGLDTSFWHDSWLSCGVLATNFPRLYR-LTD---PPRSLVGETWIASQTAWD

Query:  VSLRRNLNDVETEEWMALSLILSSISL-QNCNDSWIWPLESSNIFS--------------------------------------LSHGAINTADRLQRRM
         + RRNL+D E E+   L      + +  +  D   W L SS +F+                                      ++H  +NT D LQ R 
Subjt:  VSLRRNLNDVETEEWMALSLILSSISL-QNCNDSWIWPLESSNIFS--------------------------------------LSHGAINTADRLQRRM

Query:  PHFHLSPSWCIMCAASSEHSRHLFVHCTFASRYWSEILDAFGWSTVFPNCIKDVLTLIFVDHPFCGEKKILW
        P+  LSP  C +C    E   HLF+HC+     W  +  +     V P  I D+L   F    F     +LW
Subjt:  PHFHLSPSWCIMCAASSEHSRHLFVHCTFASRYWSEILDAFGWSTVFPNCIKDVLTLIFVDHPFCGEKKILW

A0A438JRF4 LINE-1 retrotransposable element ORF2 protein6.9e-8523.98Show/hide
Query:  KFLTWNVRGLGSWKKRALIKKIIQQQNPGIVLIQETKKSLICSRIIKSLWSSSHIGWTSLDSVGASGGILIMWSEPEFSVKETIQGLFSLSIHIFMADNF
        K L+WN RGLGS KKR ++++ +  QNP IV++QETK+     R + S+W    + W +L + GA GGI+I+W   +F   E + G FS+++     +  
Subjt:  KFLTWNVRGLGSWKKRALIKKIIQQQNPGIVLIQETKKSLICSRIIKSLWSSSHIGWTSLDSVGASGGILIMWSEPEFSVKETIQGLFSLSIHIFMADNF

Query:  SFWLSAIYGPSRHADRSKFWNELHDLAGFGGDNWILGGDFNVTRWSWEKSHGRPVTRSMRIFNQWIADYHLIDTPLQNGCYTWSSCGENHYCSLIDRFLM
        S WL+++YGP     R  FW EL DL G     W +GGDFNV R   EK     +T +MR F+++I +  L+D PL+N  +TWS+   +  C  +DRFL 
Subjt:  SFWLSAIYGPSRHADRSKFWNELHDLAGFGGDNWILGGDFNVTRWSWEKSHGRPVTRSMRIFNQWIADYHLIDTPLQNGCYTWSSCGENHYCSLIDRFLM

Query:  T---DT--------------------CL-------------------------NKF----------GVARHGFMMKLKGLKSELRKWN------------
        +   DT                    CL                          KF          G   H FM KLK +KS+L++WN            
Subjt:  T---DT--------------------CL-------------------------NKF----------GVARHGFMMKLKGLKSELRKWN------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------------------------LTQRSSAAQLPSLVSQLKLLDD-----MEDMDALANMFDIVKIFELASGLNINYSKSEVLGIHLEESELDWLMTT
                                 LT+  S  +  + VS L+  DD        M+ L N+  I+ +F   SGL IN  KS + GI+  +  L  L + 
Subjt:  -------------------------LTQRSSAAQLPSLVSQLKLLDD-----MEDMDALANMFDIVKIFELASGLNINYSKSEVLGIHLEESELDWLMTT

Query:  FGCKQGIWPSTYLGLPLGGSSKTIPFWQPVIERIQHKLHSWKYSYISKGGRHTLSQAVLSSMPIYYLSLFKLPGKVAKTLDKLFRDFFWEGSRGDGGMHN
        F C+   WP +YLGLPLGG+ KTI FW PV+ERI  +L  WK +Y+S GGR TL Q+ LS +P Y+LSLFK+P  +A  ++K+ R+F W  +      H 
Subjt:  FGCKQGIWPSTYLGLPLGGSSKTIPFWQPVIERIQHKLHSWKYSYISKGGRHTLSQAVLSSMPIYYLSLFKLPGKVAKTLDKLFRDFFWEGSRGDGGMHN

Query:  INWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWHKLIVAKYYNSELPSLW-PSIIQKSSHKSPWRFITSTIDLVSSRVKRRLGNGLDTSF
        + W  V  P  +GG+G G    RN+ALL KW+WRF  E + LW+K+I + Y     P+ W  +++ + SH+ PW+ I       S  V+  +GNG    F
Subjt:  INWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWHKLIVAKYYNSELPSLW-PSIIQKSSHKSPWRFITSTIDLVSSRVKRRLGNGLDTSF

Query:  WHDSWLSCGVLATNFPRLYRLTDPPRSLVGETWIAS-QTAWDVSLRRNLNDVETEEWMALSLILSSISLQ-NCNDSWIWPLESSNIFS------------
        W D W     L + F  LYR+       V      S   AW+++ RRNL D E +    L   LSS+    +  DS  W L SS +F+            
Subjt:  WHDSWLSCGVLATNFPRLYRLTDPPRSLVGETWIAS-QTAWDVSLRRNLNDVETEEWMALSLILSSISLQ-NCNDSWIWPLESSNIFS------------

Query:  --------------------------LSHGAINTADRLQRRMPHFHLSPSWCIMCAASSEHSRHLFVHCTFASRYWSEILDAFGWSTVFPNCIKDVLTLI
                                  ++HG +NT D+LQ R P+  L P WCI+C  + E   HLF+HC      W+++    G   V P   +D+L + 
Subjt:  --------------------------LSHGAINTADRLQRRMPHFHLSPSWCIMCAASSEHSRHLFVHCTFASRYWSEILDAFGWSTVFPNCIKDVLTLI

Query:  F
        F
Subjt:  F

A5B978 Reverse transcriptase domain-containing protein5.7e-8724.41Show/hide
Query:  KFLTWNVRGLGSWKKRALIKKIIQQQNPGIVLIQETKKSLICSRIIKSLWSSSHIGWTSLDSVGASGGILIMWSEPEFSVKETIQGLFSLSIHIFMADNF
        K L+WN RGLGS KKR  +++ +  QNP +V+ QETK+ +   R++ S+W    + W +L + GASGGI+I+W   +F+  E + G FS+++ +   +  
Subjt:  KFLTWNVRGLGSWKKRALIKKIIQQQNPGIVLIQETKKSLICSRIIKSLWSSSHIGWTSLDSVGASGGILIMWSEPEFSVKETIQGLFSLSIHIFMADNF

Query:  SFWLSAIYGPSRHADRSKFWNELHDLAGFGGDNWILGGDFNVTRWSWEKSHGRPVTRSMRIFNQWIADYHLID-TPLQNGCYTWSSCGENHYCSLIDRFL
        SFWLS++YGP++   R  FW EL DL G     W +GGDFNV R   EK     +T +MR F+++I +  L+D  PL+N  +TWS+   +  C  +DRFL
Subjt:  SFWLSAIYGPSRHADRSKFWNELHDLAGFGGDNWILGGDFNVTRWSWEKSHGRPVTRSMRIFNQWIADYHLID-TPLQNGCYTWSSCGENHYCSLIDRFL

Query:  M-----------------------TDTCL-------------------------NKF----------GVARHGFMMKLKGLKSELRKWN-----------
                                +  CL                          KF          G   H FM KLK +KS+L++WN           
Subjt:  M-----------------------TDTCL-------------------------NKF----------GVARHGFMMKLKGLKSELRKWN-----------

Query:  -------------------------------------------------------------------LTQRSSAAQLPSLVSQ-----------------
                                                                            T R S   + SL+S+                 
Subjt:  -------------------------------------------------------------------LTQRSSAAQLPSLVSQ-----------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------LKLLDD-----MEDMDALANMFDIVKIFELASGLNINYSKSEVLGIHLEESELD
                                                      L+  DD        +D L N+  I+ +F   SGL IN  KS + GI+  +  L 
Subjt:  ----------------------------------------------LKLLDD-----MEDMDALANMFDIVKIFELASGLNINYSKSEVLGIHLEESELD

Query:  WLMTTFGCKQGIWPSTYLGLPLGGSSKTIPFWQPVIERIQHKLHSWKYSYISKGGRHTLSQAVLSSMPIYYLSLFKLPGKVAKTLDKLFRDFFWEGSRGD
         L     C+   WP +YLGLPLGG+ KTI FW PV+ERI  +L  WK +Y+S GGR TL Q+ LS +P Y+LSLFK+P  +A  ++K+ RDF W G+   
Subjt:  WLMTTFGCKQGIWPSTYLGLPLGGSSKTIPFWQPVIERIQHKLHSWKYSYISKGGRHTLSQAVLSSMPIYYLSLFKLPGKVAKTLDKLFRDFFWEGSRGD

Query:  GGMHNINWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWHKLIVAKYYNSELPSLW-PSIIQKSSHKSPWRFITSTIDLVSSRVKRRLGNG
           H I W  V  P  MGG+G G    RN ALL KW+WRF  E + LWHK+I + Y     P+ W  +++ + SH+ PW+ I       S  V+  +GNG
Subjt:  GGMHNINWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWHKLIVAKYYNSELPSLW-PSIIQKSSHKSPWRFITSTIDLVSSRVKRRLGNG

Query:  LDTSFWHDSWLSCGVLATNFPRLYRLTDPPRSLVGETWIAS-QTAWDVSLRRNLNDVETEEWMALSLILSSISLQ-NCNDSWIWPLESSNIFS-------
            FW D W     L   F  LYR++      V      S   +W+ + RRNL D E +    L   L S+ L  +  DS  W L SS  FS       
Subjt:  LDTSFWHDSWLSCGVLATNFPRLYRLTDPPRSLVGETWIAS-QTAWDVSLRRNLNDVETEEWMALSLILSSISLQ-NCNDSWIWPLESSNIFS-------

Query:  -------------------------------LSHGAINTADRLQRRMPHFHLSPSWCIMCAASSEHSRHLFVHCTFASRYWSEILDAFGWSTVFPNCIKD
                                       ++HG +NT D+LQ R P+  L P WCI+C  + E   HLF+HC      W  + +  G   V P  I+D
Subjt:  -------------------------------LSHGAINTADRLQRRMPHFHLSPSWCIMCAASSEHSRHLFVHCTFASRYWSEILDAFGWSTVFPNCIKD

Query:  VLTLIF
        +L + F
Subjt:  VLTLIF

M5WJ76 Reverse transcriptase domain-containing protein (Fragment)1.4e-8524.26Show/hide
Query:  MKFLTWNVRGLGSWKKRALIKKIIQQQNPGIVLIQETKKSLICSRIIKSLWSSSHIGWTSLDSVGASGGILIMWSEPEFSVKETIQGLFSLSIHIFMADN
        MK ++WN+RGLGS +KR L+K+ +++  P IV++ ETKK ++  +++  +W S    W    S+G SGGI ++W+    SV +++ G FS+SI I     
Subjt:  MKFLTWNVRGLGSWKKRALIKKIIQQQNPGIVLIQETKKSLICSRIIKSLWSSSHIGWTSLDSVGASGGILIMWSEPEFSVKETIQGLFSLSIHIFMADN

Query:  FSFWLSAIYGPSRHADRSKFWNELHDLAGFGGDNWILGGDFNVTRWSWEKSHGRPVTRSMRIFNQWIADYHLIDTPLQNGCYTWSSCGENHYCSLIDRFL
          +WLS IYGP R  +R+ FW EL DL G+ GD W LGGDFNV R+S EKS+   VT+SMR FN +I + +L D  L N  +TWS+  EN  C  +DRFL
Subjt:  FSFWLSAIYGPSRHADRSKFWNELHDLAGFGGDNWILGGDFNVTRWSWEKSHGRPVTRSMRIFNQWIADYHLIDTPLQNGCYTWSSCGENHYCSLIDRFL

Query:  MTDTCLNKFGVARH----------------------------------------------------------GFMMKLKGLKSELRKWN-----------
        ++ +    F   RH                                                           FM +LK LKS+L+ W+           
Subjt:  MTDTCLNKFGVARH----------------------------------------------------------GFMMKLKGLKSELRKWN-----------

Query:  ---------LTQRSSAAQLP--------------------------------------------------------------------------------
                 L QR     L                                                                                 
Subjt:  ---------LTQRSSAAQLP--------------------------------------------------------------------------------

Query:  ------------------------------------------------------------------------------------SLVSQL----------
                                                                                            SLV+ L          
Subjt:  ------------------------------------------------------------------------------------SLVSQL----------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------------KLLDDMEDMDAL--------------------------------ANMFDIVKIFELASGLNINYSKSEVLGIHL
                                  +L++  +D++ +                                 N+  ++K+F   SG+ IN +KS +LGI+ 
Subjt:  --------------------------KLLDDMEDMDAL--------------------------------ANMFDIVKIFELASGLNINYSKSEVLGIHL

Query:  EESELDWLMTTFGCKQGIWPSTYLGLPLGGSSKTIPFWQPVIERIQHKLHSWKYSYISKGGRHTLSQAVLSSMPIYYLSLFKLPGKVAKTLDKLFRDFFW
            L+ +  ++GC+ G WP  YLGLPLGG+ + + FW PV+E+++ +L  WK + +SKGGR TL QAVLSS+P YY+SLFK+P  VA  +++L R+F W
Subjt:  EESELDWLMTTFGCKQGIWPSTYLGLPLGGSSKTIPFWQPVIERIQHKLHSWKYSYISKGGRHTLSQAVLSSMPIYYLSLFKLPGKVAKTLDKLFRDFFW

Query:  EGSRGDGGMHNINWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWHKLIVAKYYNSELPSLWPSIIQKSSHKSPWRFITSTIDLVSSRVKR
        EG       H + W  V      GG+GIG+ + R  AL AKW+WRF  E NSLWH++I +KY                S+ +PWR I+   +      + 
Subjt:  EGSRGDGGMHNINWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWHKLIVAKYYNSELPSLWPSIIQKSSHKSPWRFITSTIDLVSSRVKR

Query:  RLGNGLDTSFWHDSWLSCGVLATNFPRLYRLTDPPRSLVG--ETWIASQTAWDVSLRRNLNDVETEEWMALSLILSSISLQNCN-DSWIWPLESSNIFS-
         +GNG    FW D WL  G+L   FPRL  L+      +            WD   RRNL++ E  E + L  IL ++ L     D   W +E    FS 
Subjt:  RLGNGLDTSFWHDSWLSCGVLATNFPRLYRLTDPPRSLVG--ETWIASQTAWDVSLRRNLNDVETEEWMALSLILSSISLQNCN-DSWIWPLESSNIFS-

Query:  ------------------------------------LSHGAINTADRLQRRMPHFHLSPSWCIMCAASSEHSRHLFVHCTFASRYWSEILDAFGWSTVFP
                                             ++G INT D +QRR P   LSPSWC++C  ++E+  HLF+HC+++ R W ++L A G   V P
Subjt:  ------------------------------------LSHGAINTADRLQRRMPHFHLSPSWCIMCAASSEHSRHLFVHCTFASRYWSEILDAFGWSTVFP

Query:  NCIKDVLTL
            ++L++
Subjt:  NCIKDVLTL

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657502.8e-2734.74Show/hide
Query:  VIERIQHKLHSWKYSYISKGGRHTLSQAVLSSMPIYYLSLFKLPGKVAKTLDKLFRDFFWEGSRGDGGMHNINWATVQLPHLMGGIGIGNFQNRNLALLA
        ++ER+  ++  W+   +S  GR TL++AVLSSMP++ +S   LP  +   LD+L R F W  +      H + W+ V  P   GG+G+   ++ N AL++
Subjt:  VIERIQHKLHSWKYSYISKGGRHTLSQAVLSSMPIYYLSLFKLPGKVAKTLDKLFRDFFWEGSRGDGGMHNINWATVQLPHLMGGIGIGNFQNRNLALLA

Query:  KWIWRFLHEENSLWHKLIVAKYYNSEL-PSLWPSIIQKSSHKSPWRFITSTI-DLVSSRVKRRLGNGLDTSFWHDSWLSCGVLATNFPRLYRLTDPPRSL
        K  WR L E+NSLW  ++  KY+  E+  S W  +I K S  S WR I   + D+VS  V    G+G    FW D W+S G          R TD    +
Subjt:  KWIWRFLHEENSLWHKLIVAKYYNSEL-PSLWPSIIQKSSHKSPWRFITSTI-DLVSSRVKRRLGNGLDTSFWHDSWLSCGVLATNFPRLYRLTDPPRSL

Query:  VGETWIASQTAWD
          + WI  +  WD
Subjt:  VGETWIASQTAWD

P93295 Uncharacterized mitochondrial protein AtMg003101.0e-0826.17Show/hide
Query:  SMPIYYLSLFKLPGKVAKTLDKLFRDFFWEGSRGDGGMHNINWATV-QLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWHKLIVAKYYNSELPSL
        ++P+Y +S F+L   + K L     +F+W        +  + W  + +     GG+G  +    N ALLAK  +R +H+ ++L  +L+ ++Y+       
Subjt:  SMPIYYLSLFKLPGKVAKTLDKLFRDFFWEGSRGDGGMHNINWATV-QLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWHKLIVAKYYNSELPSL

Query:  WPSIIQKSSHKSP---WRFITSTIDLVSSRVKRRLGNGLDTSFWHDSWL
          S+++ S    P   WR I    +L+S  + R +G+G+ T  W D W+
Subjt:  WPSIIQKSSHKSP---WRFITSTIDLVSSRVKRRLGNGLDTSFWHDSWL

Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein3.0e-1623.84Show/hide
Query:  SMPIYYLSLFKLPGKVAKTLDKLFRDFFWEGSRGDGGMHNINWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWHKLIVAKYYNSELPSLW
        ++P Y ++ F LP  V K +  +  DF+W   +   GMH   W  +      GGIG  + +  NLALL K +WR L    SL  K+  ++Y++   P   
Subjt:  SMPIYYLSLFKLPGKVAKTLDKLFRDFFWEGSRGDGGMHNINWATVQLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWHKLIVAKYYNSELPSLW

Query:  PSIIQKSSHKSPWRFITSTIDLVSSRVKRRLGNGLDTSFWHDSWL-----SCGVLATNFP---------------------RLYR-------LTDPPRSL
        P     S     W+ I ++ +++    +  +GNG D   W   WL     S  +     P                     R +R         +  R L
Subjt:  PSIIQKSSHKSPWRFITSTIDLVSSRVKRRLGNGLDTSFWHDSWL-----SCGVLATNFP---------------------RLYR-------LTDPPRSL

Query:  VGE-----TWIASQTAWDVSLRRNLNDVETEEWMALSLILSSISLQNCNDSWIWPL--------ESSNIFSLSHGAINTADRLQRRMPHFHLS-PSWCIM
        +GE       I     WD +   +   V++  W+   +I    S Q  ++  + P+         S  I       ++ +  +   + + HLS  S CI 
Subjt:  VGE-----TWIASQTAWDVSLRRNLNDVETEEWMALSLILSSISLQNCNDSWIWPL--------ESSNIFSLSHGAINTADRLQRRMPHFHLS-PSWCIM

Query:  CAASSEHSRHLFVHCTFASRYWS
        C +  E   HL   CTFA   W+
Subjt:  CAASSEHSRHLFVHCTFASRYWS

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein7.2e-1026.17Show/hide
Query:  SMPIYYLSLFKLPGKVAKTLDKLFRDFFWEGSRGDGGMHNINWATV-QLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWHKLIVAKYYNSELPSL
        ++P+Y +S F+L   + K L     +F+W        +  + W  + +     GG+G  +    N ALLAK  +R +H+ ++L  +L+ ++Y+       
Subjt:  SMPIYYLSLFKLPGKVAKTLDKLFRDFFWEGSRGDGGMHNINWATV-QLPHLMGGIGIGNFQNRNLALLAKWIWRFLHEENSLWHKLIVAKYYNSELPSL

Query:  WPSIIQKSSHKSP---WRFITSTIDLVSSRVKRRLGNGLDTSFWHDSWL
          S+++ S    P   WR I    +L+S  + R +G+G+ T  W D W+
Subjt:  WPSIIQKSSHKSP---WRFITSTIDLVSSRVKRRLGNGLDTSFWHDSWL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAACCACAGAGACTCACCCTGTTCAACCATGGAATCATTCTACCCGATCCATCTCCATTGATAGGAAAAATTTCGCAATTGCTTTTGATGAACATTTTAGAGGAAG
TAGAGCCAAAATCACTGAATATAGCAGATACTCATCTCATTCGATTTCTCTTTCTTGGAAATCTCTAAAATGGCTTGCCTCATCCTTCAACACCATTGTTCACTCACCAT
GTTCGCACAAGTTTTTCTCGGATTTAAGGAGCGACGACTATACTCTTTGGCTCGAAAAGTTGAATAACAAGAACGACTTTTTTGTTGAAGTCAATCAGCCCACAAAGCCA
ATTTCTATATCATTCAAGGACATCCTCCAATCAAAGCCACCAACAGCTACCATTACTCCTCCCTTGAAAGAGCCCTCGAAGGAGCCTTCAGTCTCCAAAATTGATGAAGA
ATGGCAAGAGATAATTGTTCTCCAACGAAGCAATCTACATGATGACTGGCCGAGCATTCATCAATCACTTGTTGCCGAGCAAGTACTTCGATGCAGCATCAATCCTTTCC
AGGCAAATAAAGCCATGCTCCATGTTTATGATCGAGCCATTGCTACAAATGTATGCGCTCTCTCCGATTGGACCCTTATTGGTAAGCATAAGATGAAATTTTATCCTTTA
ACCACTTCTGCTGCTCAACAGGATATTTTGACACCATCTTATGGAGGTTGGATTGAGATCTCTTATGTTCCCCCTACCTTATGGACTGAGCGTATTTTTCGTTTCATTGG
AGATTCTTGCGGCGGCTTTGTGGAGACTTCTAACCTCACCAATCGGATGATAATAGCAACTGAGGCTAGGATAAGAATTCGGCCAAACTCTTCTGGTTTCATTCCCGCCG
CCGTTAAACTACCATCAGACTTGGCCAGCGATGAACTCACGGTGCAAATCAAAGGCATATCCGGCAAGCCACAGAGAATCGGCCTCATTAATGATGGAATACCTAATATG
GTATTTCAAGATTCTGAATTAAAGAAGAAAGAGGAATCGGAGAAGGAGAAATTGATTTCTAATTCGAAAAGGCAATCTTTAACGGCAAATATGCCAAAAATCACGGTACC
GGACGATACCACCTCACCACCGCCTATATTTGGAAAAATTGACAAAGGAAAGACTTCTCTCCCTGAATTGTCGACGTATCAGACTTCTCCTTCCCCGATTGACACATTGC
CACCACTACAGCATAAGCTTACCCATCATACTTCCTCTCCCAAACCATTGGAACCCCCACAAATCCCACCCTACCCTTCACCACGGCCTTCACCAACACCAAATATGAAG
TCTCCAACAAATACATTTCCCAATTGCCTACAACACTTAGCCCCAATCTTAAGGGGTCGAGAATATTATATGAAATTTTTGACATGGAATGTGCGTGGATTGGGGTCATG
GAAGAAAAGGGCTTTAATTAAGAAAATTATTCAGCAACAAAACCCGGGCATTGTTCTTATTCAGGAGACTAAAAAATCATTGATTTGCAGTCGGATTATTAAATCTCTTT
GGAGCTCTTCTCATATTGGTTGGACTTCTCTTGACTCAGTGGGTGCCTCTGGAGGCATTCTTATTATGTGGAGCGAACCAGAATTTTCAGTAAAGGAGACTATTCAAGGT
CTTTTCTCTCTCTCTATTCATATCTTTATGGCTGATAATTTCTCTTTTTGGCTATCGGCTATTTATGGCCCTTCTAGACATGCTGATAGATCAAAATTCTGGAATGAGCT
ACATGACTTGGCTGGATTTGGTGGTGACAATTGGATTCTTGGAGGAGATTTTAATGTCACCCGTTGGTCATGGGAAAAATCGCATGGTCGACCCGTGACTAGGAGTATGC
GTATTTTCAACCAATGGATCGCTGACTATCATCTTATAGACACTCCTTTACAGAACGGTTGCTATACGTGGTCCAGTTGTGGTGAAAATCATTATTGCTCATTGATTGAT
CGATTCTTAATGACGGATACTTGTCTCAATAAATTTGGTGTAGCTCGCCATGGGTTTATGATGAAGCTTAAAGGGTTGAAATCTGAGCTCAGGAAATGGAATTTAACTCA
GCGCTCATCTGCTGCTCAACTTCCATCTCTTGTTTCACAGTTAAAATTATTGGATGATATGGAAGACATGGATGCTTTGGCCAACATGTTCGATATTGTTAAAATTTTTG
AGCTAGCTTCTGGATTGAATATTAATTATTCCAAGAGTGAGGTTCTGGGAATTCATTTAGAGGAGTCAGAATTGGATTGGTTGATGACTACGTTTGGCTGTAAACAAGGA
ATTTGGCCTTCCACTTACCTTGGGTTACCTTTGGGAGGCAGTTCTAAAACTATTCCTTTTTGGCAGCCTGTGATTGAAAGAATCCAACATAAACTTCATAGTTGGAAATA
TTCATATATTTCAAAAGGTGGTCGACATACTCTTTCTCAAGCAGTTCTTTCCAGTATGCCAATATATTATCTATCCTTATTCAAACTGCCGGGAAAGGTTGCAAAAACTC
TTGATAAGTTGTTTCGTGATTTCTTTTGGGAGGGATCTAGAGGTGATGGTGGTATGCACAATATTAACTGGGCAACAGTACAACTTCCACATTTGATGGGGGGTATTGGT
ATTGGTAACTTTCAAAATCGCAATCTTGCTCTTCTTGCAAAGTGGATTTGGAGATTTTTACATGAGGAAAACTCTCTATGGCATAAGCTGATTGTAGCTAAATATTATAA
CTCTGAGTTGCCTAGTCTTTGGCCTAGCATTATTCAAAAAAGTTCTCACAAATCTCCTTGGCGATTCATTACGTCTACTATTGACCTTGTATCTTCACGTGTTAAAAGAA
GGTTGGGTAATGGTCTTGATACTTCATTCTGGCATGATTCATGGTTAAGTTGTGGTGTTTTGGCTACAAATTTTCCTCGCCTTTATCGTTTAACAGATCCTCCGAGGAGT
TTGGTTGGTGAAACATGGATTGCTTCTCAAACAGCATGGGATGTGAGTCTTCGGCGTAATTTAAATGATGTAGAGACAGAGGAATGGATGGCTTTATCACTTATTCTTTC
CTCCATCAGCTTACAGAACTGTAATGATTCCTGGATTTGGCCTTTGGAATCTTCCAATATTTTTTCTCTTAGTCATGGTGCTATTAATACTGCTGATCGACTTCAACGAC
GGATGCCTCATTTTCATTTGTCTCCATCTTGGTGCATAATGTGTGCTGCTAGTTCAGAACATTCTAGGCATCTATTTGTTCACTGTACCTTCGCATCCAGATATTGGTCC
GAGATTCTAGATGCTTTTGGATGGTCCACCGTTTTTCCAAATTGCATTAAGGATGTTCTTACTCTCATTTTTGTGGATCATCCTTTTTGTGGAGAAAAGAAGATCTTGTG
GCTTGCTTTGAACAGAGTTTTCTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAACCACAGAGACTCACCCTGTTCAACCATGGAATCATTCTACCCGATCCATCTCCATTGATAGGAAAAATTTCGCAATTGCTTTTGATGAACATTTTAGAGGAAG
TAGAGCCAAAATCACTGAATATAGCAGATACTCATCTCATTCGATTTCTCTTTCTTGGAAATCTCTAAAATGGCTTGCCTCATCCTTCAACACCATTGTTCACTCACCAT
GTTCGCACAAGTTTTTCTCGGATTTAAGGAGCGACGACTATACTCTTTGGCTCGAAAAGTTGAATAACAAGAACGACTTTTTTGTTGAAGTCAATCAGCCCACAAAGCCA
ATTTCTATATCATTCAAGGACATCCTCCAATCAAAGCCACCAACAGCTACCATTACTCCTCCCTTGAAAGAGCCCTCGAAGGAGCCTTCAGTCTCCAAAATTGATGAAGA
ATGGCAAGAGATAATTGTTCTCCAACGAAGCAATCTACATGATGACTGGCCGAGCATTCATCAATCACTTGTTGCCGAGCAAGTACTTCGATGCAGCATCAATCCTTTCC
AGGCAAATAAAGCCATGCTCCATGTTTATGATCGAGCCATTGCTACAAATGTATGCGCTCTCTCCGATTGGACCCTTATTGGTAAGCATAAGATGAAATTTTATCCTTTA
ACCACTTCTGCTGCTCAACAGGATATTTTGACACCATCTTATGGAGGTTGGATTGAGATCTCTTATGTTCCCCCTACCTTATGGACTGAGCGTATTTTTCGTTTCATTGG
AGATTCTTGCGGCGGCTTTGTGGAGACTTCTAACCTCACCAATCGGATGATAATAGCAACTGAGGCTAGGATAAGAATTCGGCCAAACTCTTCTGGTTTCATTCCCGCCG
CCGTTAAACTACCATCAGACTTGGCCAGCGATGAACTCACGGTGCAAATCAAAGGCATATCCGGCAAGCCACAGAGAATCGGCCTCATTAATGATGGAATACCTAATATG
GTATTTCAAGATTCTGAATTAAAGAAGAAAGAGGAATCGGAGAAGGAGAAATTGATTTCTAATTCGAAAAGGCAATCTTTAACGGCAAATATGCCAAAAATCACGGTACC
GGACGATACCACCTCACCACCGCCTATATTTGGAAAAATTGACAAAGGAAAGACTTCTCTCCCTGAATTGTCGACGTATCAGACTTCTCCTTCCCCGATTGACACATTGC
CACCACTACAGCATAAGCTTACCCATCATACTTCCTCTCCCAAACCATTGGAACCCCCACAAATCCCACCCTACCCTTCACCACGGCCTTCACCAACACCAAATATGAAG
TCTCCAACAAATACATTTCCCAATTGCCTACAACACTTAGCCCCAATCTTAAGGGGTCGAGAATATTATATGAAATTTTTGACATGGAATGTGCGTGGATTGGGGTCATG
GAAGAAAAGGGCTTTAATTAAGAAAATTATTCAGCAACAAAACCCGGGCATTGTTCTTATTCAGGAGACTAAAAAATCATTGATTTGCAGTCGGATTATTAAATCTCTTT
GGAGCTCTTCTCATATTGGTTGGACTTCTCTTGACTCAGTGGGTGCCTCTGGAGGCATTCTTATTATGTGGAGCGAACCAGAATTTTCAGTAAAGGAGACTATTCAAGGT
CTTTTCTCTCTCTCTATTCATATCTTTATGGCTGATAATTTCTCTTTTTGGCTATCGGCTATTTATGGCCCTTCTAGACATGCTGATAGATCAAAATTCTGGAATGAGCT
ACATGACTTGGCTGGATTTGGTGGTGACAATTGGATTCTTGGAGGAGATTTTAATGTCACCCGTTGGTCATGGGAAAAATCGCATGGTCGACCCGTGACTAGGAGTATGC
GTATTTTCAACCAATGGATCGCTGACTATCATCTTATAGACACTCCTTTACAGAACGGTTGCTATACGTGGTCCAGTTGTGGTGAAAATCATTATTGCTCATTGATTGAT
CGATTCTTAATGACGGATACTTGTCTCAATAAATTTGGTGTAGCTCGCCATGGGTTTATGATGAAGCTTAAAGGGTTGAAATCTGAGCTCAGGAAATGGAATTTAACTCA
GCGCTCATCTGCTGCTCAACTTCCATCTCTTGTTTCACAGTTAAAATTATTGGATGATATGGAAGACATGGATGCTTTGGCCAACATGTTCGATATTGTTAAAATTTTTG
AGCTAGCTTCTGGATTGAATATTAATTATTCCAAGAGTGAGGTTCTGGGAATTCATTTAGAGGAGTCAGAATTGGATTGGTTGATGACTACGTTTGGCTGTAAACAAGGA
ATTTGGCCTTCCACTTACCTTGGGTTACCTTTGGGAGGCAGTTCTAAAACTATTCCTTTTTGGCAGCCTGTGATTGAAAGAATCCAACATAAACTTCATAGTTGGAAATA
TTCATATATTTCAAAAGGTGGTCGACATACTCTTTCTCAAGCAGTTCTTTCCAGTATGCCAATATATTATCTATCCTTATTCAAACTGCCGGGAAAGGTTGCAAAAACTC
TTGATAAGTTGTTTCGTGATTTCTTTTGGGAGGGATCTAGAGGTGATGGTGGTATGCACAATATTAACTGGGCAACAGTACAACTTCCACATTTGATGGGGGGTATTGGT
ATTGGTAACTTTCAAAATCGCAATCTTGCTCTTCTTGCAAAGTGGATTTGGAGATTTTTACATGAGGAAAACTCTCTATGGCATAAGCTGATTGTAGCTAAATATTATAA
CTCTGAGTTGCCTAGTCTTTGGCCTAGCATTATTCAAAAAAGTTCTCACAAATCTCCTTGGCGATTCATTACGTCTACTATTGACCTTGTATCTTCACGTGTTAAAAGAA
GGTTGGGTAATGGTCTTGATACTTCATTCTGGCATGATTCATGGTTAAGTTGTGGTGTTTTGGCTACAAATTTTCCTCGCCTTTATCGTTTAACAGATCCTCCGAGGAGT
TTGGTTGGTGAAACATGGATTGCTTCTCAAACAGCATGGGATGTGAGTCTTCGGCGTAATTTAAATGATGTAGAGACAGAGGAATGGATGGCTTTATCACTTATTCTTTC
CTCCATCAGCTTACAGAACTGTAATGATTCCTGGATTTGGCCTTTGGAATCTTCCAATATTTTTTCTCTTAGTCATGGTGCTATTAATACTGCTGATCGACTTCAACGAC
GGATGCCTCATTTTCATTTGTCTCCATCTTGGTGCATAATGTGTGCTGCTAGTTCAGAACATTCTAGGCATCTATTTGTTCACTGTACCTTCGCATCCAGATATTGGTCC
GAGATTCTAGATGCTTTTGGATGGTCCACCGTTTTTCCAAATTGCATTAAGGATGTTCTTACTCTCATTTTTGTGGATCATCCTTTTTGTGGAGAAAAGAAGATCTTGTG
GCTTGCTTTGAACAGAGTTTTCTTCTAG
Protein sequenceShow/hide protein sequence
MKTTETHPVQPWNHSTRSISIDRKNFAIAFDEHFRGSRAKITEYSRYSSHSISLSWKSLKWLASSFNTIVHSPCSHKFFSDLRSDDYTLWLEKLNNKNDFFVEVNQPTKP
ISISFKDILQSKPPTATITPPLKEPSKEPSVSKIDEEWQEIIVLQRSNLHDDWPSIHQSLVAEQVLRCSINPFQANKAMLHVYDRAIATNVCALSDWTLIGKHKMKFYPL
TTSAAQQDILTPSYGGWIEISYVPPTLWTERIFRFIGDSCGGFVETSNLTNRMIIATEARIRIRPNSSGFIPAAVKLPSDLASDELTVQIKGISGKPQRIGLINDGIPNM
VFQDSELKKKEESEKEKLISNSKRQSLTANMPKITVPDDTTSPPPIFGKIDKGKTSLPELSTYQTSPSPIDTLPPLQHKLTHHTSSPKPLEPPQIPPYPSPRPSPTPNMK
SPTNTFPNCLQHLAPILRGREYYMKFLTWNVRGLGSWKKRALIKKIIQQQNPGIVLIQETKKSLICSRIIKSLWSSSHIGWTSLDSVGASGGILIMWSEPEFSVKETIQG
LFSLSIHIFMADNFSFWLSAIYGPSRHADRSKFWNELHDLAGFGGDNWILGGDFNVTRWSWEKSHGRPVTRSMRIFNQWIADYHLIDTPLQNGCYTWSSCGENHYCSLID
RFLMTDTCLNKFGVARHGFMMKLKGLKSELRKWNLTQRSSAAQLPSLVSQLKLLDDMEDMDALANMFDIVKIFELASGLNINYSKSEVLGIHLEESELDWLMTTFGCKQG
IWPSTYLGLPLGGSSKTIPFWQPVIERIQHKLHSWKYSYISKGGRHTLSQAVLSSMPIYYLSLFKLPGKVAKTLDKLFRDFFWEGSRGDGGMHNINWATVQLPHLMGGIG
IGNFQNRNLALLAKWIWRFLHEENSLWHKLIVAKYYNSELPSLWPSIIQKSSHKSPWRFITSTIDLVSSRVKRRLGNGLDTSFWHDSWLSCGVLATNFPRLYRLTDPPRS
LVGETWIASQTAWDVSLRRNLNDVETEEWMALSLILSSISLQNCNDSWIWPLESSNIFSLSHGAINTADRLQRRMPHFHLSPSWCIMCAASSEHSRHLFVHCTFASRYWS
EILDAFGWSTVFPNCIKDVLTLIFVDHPFCGEKKILWLALNRVFF