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Spg011165 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg011165
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold4:25180177..25182820
RNA-Seq ExpressionSpg011165
SyntenySpg011165
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052218.1 uncharacterized protein E6C27_scaffold207G00290 [Cucumis melo var. makuwa]5.1e-2445.66Show/hide
Query:  NCQPLVFYSVSATQKGIRG----FSSKAGGSLIFSGFSSILGWTSRIRSSIWPRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQVKIELPVPDTL
        NCQPL+     +  + +RG    F SK+GG L+FS   SIL           PRGNR +L TG+LDKT                     V+IELPVPDTL
Subjt:  NCQPLVFYSVSATQKGIRG----FSSKAGGSLIFSGFSSILGWTSRIRSSIWPRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQVKIELPVPDTL

Query:  PTSAESSRSSSSTWVELYIESVYYVNVLFNVQEGQRVS-----------LEEDDVRWLHAIFWAKLAGGPGGG
        PTSAESS+S+SSTW+ELY ESV +V +LF      RV+           +  DD+ WLHA+FWAK AG PGGG
Subjt:  PTSAESSRSSSSTWVELYIESVYYVNVLFNVQEGQRVS-----------LEEDDVRWLHAIFWAKLAGGPGGG

KAA0066850.1 putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.5e-2353.33Show/hide
Query:  GFSSKAGGSLIFSGFSSIL--GWTSRIRSSIWPRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ-----------------VKIELPVPDTLPTS
        GFSSK GG L+FS   SIL    +++    IWPR NR SLQTGELDKT+SIDYMTEILS R YGTVCTQ                 V+IELPVPDTLP+S
Subjt:  GFSSKAGGSLIFSGFSSIL--GWTSRIRSSIWPRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ-----------------VKIELPVPDTLPTS

Query:  AESSRSSSSTWVELYIESV------YYVNV------LFNVQEGQRVSLEE
         ES  S+SSTW+ELY E V      Y+ N       L  V + Q+ SLEE
Subjt:  AESSRSSSSTWVELYIESV------YYVNV------LFNVQEGQRVSLEE

TYK08801.1 hypothetical protein E5676_scaffold796G00040 [Cucumis melo var. makuwa]8.3e-3542.4Show/hide
Query:  HLFPSKLSEHLKERVKEEEEEEFRGFEVEEDKKSSCKASHSRIWVQNCQPLVFYSVSATQKGIRGFSSKAGGSLIFSGFSSILGWTSRIRSSIW------
        H FPSKLSEH +ERVK EEEEEFRG  +++  KSSCKA+H RIW                    GFSSK  G L+FS   SIL      +   W      
Subjt:  HLFPSKLSEHLKERVKEEEEEEFRGFEVEEDKKSSCKASHSRIWVQNCQPLVFYSVSATQKGIRGFSSKAGGSLIFSGFSSILGWTSRIRSSIW------

Query:  -------PRGNRSSLQTGELDK-TISIDYMTEILSPRLYGTVCTQV------------------------------------------------------
               PRGNRSSLQTG+LDK  ISIDYMTEILS RLYGTVC QV                                                      
Subjt:  -------PRGNRSSLQTGELDK-TISIDYMTEILSPRLYGTVCTQV------------------------------------------------------

Query:  ---KIELPVPDTLPTSAESSRSSSSTWVELYIESVYYVNVLFNVQEGQRVSLE--------EDDVRWLHAIFWAKLAGGPGGG
           +IEL VPDTLPTSAESS S+SSTW+E   E  Y  +   +V+   R+  E        E+DV WLHA+F AK+AGG GGG
Subjt:  ---KIELPVPDTLPTSAESSRSSSSTWVELYIESVYYVNVLFNVQEGQRVSLE--------EDDVRWLHAIFWAKLAGGPGGG

TYK08952.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.3e-2755.41Show/hide
Query:  IRSSIW-PRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ-----------------VKIELPVPDTLPTSAESSRSSSSTWVELYIESVYYVNVL
        I  + W PR NR SLQTGELDKT+SIDYMTEILS RL GTVCTQ                 V+IELPVPDTLPTSAE   S+SSTW+ELY+ESV +V +L
Subjt:  IRSSIW-PRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ-----------------VKIELPVPDTLPTSAESSRSSSSTWVELYIESVYYVNVL

Query:  FN-----------VQEGQRVSLEEDDVRWLHAIFWAKLAGGPGGGPVG
        F              EG    +  DDV WLHA+F AK AGGP GG  G
Subjt:  FN-----------VQEGQRVSLEEDDVRWLHAIFWAKLAGGPGGGPVG

TYK27997.1 putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.5e-2353.33Show/hide
Query:  GFSSKAGGSLIFSGFSSIL--GWTSRIRSSIWPRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ-----------------VKIELPVPDTLPTS
        GFSSK GG L+FS   SIL    +++    IWPR NR SLQTGELDKT+SIDYMTEILS R YGTVCTQ                 V+IELPVPDTLP+S
Subjt:  GFSSKAGGSLIFSGFSSIL--GWTSRIRSSIWPRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ-----------------VKIELPVPDTLPTS

Query:  AESSRSSSSTWVELYIESV------YYVNV------LFNVQEGQRVSLEE
         ES  S+SSTW+ELY E V      Y+ N       L  V + Q+ SLEE
Subjt:  AESSRSSSSTWVELYIESV------YYVNV------LFNVQEGQRVSLEE

TrEMBL top hitse value%identityAlignment
A0A5A7UAH6 CCHC-type domain-containing protein2.5e-2445.66Show/hide
Query:  NCQPLVFYSVSATQKGIRG----FSSKAGGSLIFSGFSSILGWTSRIRSSIWPRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQVKIELPVPDTL
        NCQPL+     +  + +RG    F SK+GG L+FS   SIL           PRGNR +L TG+LDKT                     V+IELPVPDTL
Subjt:  NCQPLVFYSVSATQKGIRG----FSSKAGGSLIFSGFSSILGWTSRIRSSIWPRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQVKIELPVPDTL

Query:  PTSAESSRSSSSTWVELYIESVYYVNVLFNVQEGQRVS-----------LEEDDVRWLHAIFWAKLAGGPGGG
        PTSAESS+S+SSTW+ELY ESV +V +LF      RV+           +  DD+ WLHA+FWAK AG PGGG
Subjt:  PTSAESSRSSSSTWVELYIESVYYVNVLFNVQEGQRVS-----------LEEDDVRWLHAIFWAKLAGGPGGG

A0A5A7VI26 Putative DNA/RNA polymerases superfamily protein7.2e-2453.33Show/hide
Query:  GFSSKAGGSLIFSGFSSIL--GWTSRIRSSIWPRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ-----------------VKIELPVPDTLPTS
        GFSSK GG L+FS   SIL    +++    IWPR NR SLQTGELDKT+SIDYMTEILS R YGTVCTQ                 V+IELPVPDTLP+S
Subjt:  GFSSKAGGSLIFSGFSSIL--GWTSRIRSSIWPRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ-----------------VKIELPVPDTLPTS

Query:  AESSRSSSSTWVELYIESV------YYVNV------LFNVQEGQRVSLEE
         ES  S+SSTW+ELY E V      Y+ N       L  V + Q+ SLEE
Subjt:  AESSRSSSSTWVELYIESV------YYVNV------LFNVQEGQRVSLEE

A0A5D3CAC6 Uncharacterized protein4.0e-3542.4Show/hide
Query:  HLFPSKLSEHLKERVKEEEEEEFRGFEVEEDKKSSCKASHSRIWVQNCQPLVFYSVSATQKGIRGFSSKAGGSLIFSGFSSILGWTSRIRSSIW------
        H FPSKLSEH +ERVK EEEEEFRG  +++  KSSCKA+H RIW                    GFSSK  G L+FS   SIL      +   W      
Subjt:  HLFPSKLSEHLKERVKEEEEEEFRGFEVEEDKKSSCKASHSRIWVQNCQPLVFYSVSATQKGIRGFSSKAGGSLIFSGFSSILGWTSRIRSSIW------

Query:  -------PRGNRSSLQTGELDK-TISIDYMTEILSPRLYGTVCTQV------------------------------------------------------
               PRGNRSSLQTG+LDK  ISIDYMTEILS RLYGTVC QV                                                      
Subjt:  -------PRGNRSSLQTGELDK-TISIDYMTEILSPRLYGTVCTQV------------------------------------------------------

Query:  ---KIELPVPDTLPTSAESSRSSSSTWVELYIESVYYVNVLFNVQEGQRVSLE--------EDDVRWLHAIFWAKLAGGPGGG
           +IEL VPDTLPTSAESS S+SSTW+E   E  Y  +   +V+   R+  E        E+DV WLHA+F AK+AGG GGG
Subjt:  ---KIELPVPDTLPTSAESSRSSSSTWVELYIESVYYVNVLFNVQEGQRVSLE--------EDDVRWLHAIFWAKLAGGPGGG

A0A5D3CCC7 DNA/RNA polymerases superfamily protein6.2e-2855.41Show/hide
Query:  IRSSIW-PRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ-----------------VKIELPVPDTLPTSAESSRSSSSTWVELYIESVYYVNVL
        I  + W PR NR SLQTGELDKT+SIDYMTEILS RL GTVCTQ                 V+IELPVPDTLPTSAE   S+SSTW+ELY+ESV +V +L
Subjt:  IRSSIW-PRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ-----------------VKIELPVPDTLPTSAESSRSSSSTWVELYIESVYYVNVL

Query:  FN-----------VQEGQRVSLEEDDVRWLHAIFWAKLAGGPGGGPVG
        F              EG    +  DDV WLHA+F AK AGGP GG  G
Subjt:  FN-----------VQEGQRVSLEEDDVRWLHAIFWAKLAGGPGGGPVG

A0A5D3DW05 Putative DNA/RNA polymerases superfamily protein7.2e-2453.33Show/hide
Query:  GFSSKAGGSLIFSGFSSIL--GWTSRIRSSIWPRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ-----------------VKIELPVPDTLPTS
        GFSSK GG L+FS   SIL    +++    IWPR NR SLQTGELDKT+SIDYMTEILS R YGTVCTQ                 V+IELPVPDTLP+S
Subjt:  GFSSKAGGSLIFSGFSSIL--GWTSRIRSSIWPRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ-----------------VKIELPVPDTLPTS

Query:  AESSRSSSSTWVELYIESV------YYVNV------LFNVQEGQRVSLEE
         ES  S+SSTW+ELY E V      Y+ N       L  V + Q+ SLEE
Subjt:  AESSRSSSSTWVELYIESV------YYVNV------LFNVQEGQRVSLEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAGCAAGACACCCACCACCGCTTCACCCATTATCAGCCCCATTTCTCATCTTTTTCCATCCAAACTTTCAGAGCACCTTAAGGAGAGAGTGAAGGAGGAAGAAGA
AGAAGAATTTCGTGGTTTTGAGGTTGAAGAAGATAAGAAAAGCTCATGCAAAGCCAGCCATAGCAGAATCTGGGTGCAAAACTGTCAACCTCTGGTTTTTTATTCGGTTT
CAGCTACACAGAAGGGAATAAGAGGATTTTCGAGCAAAGCAGGAGGATCTCTGATTTTCTCTGGTTTTTCGAGCATTCTGGGGTGGACAAGTCGAATCCGAAGCTCTATT
TGGCCAAGAGGAAATAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACAATTTCTATTGACTACATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCAC
ACAGGTAAAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGCTCCAGATCAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCTGTCTATTATG
TAAATGTTTTGTTCAACGTTCAGGAGGGTCAGCGGGTATCGTTAGAGGAGGACGATGTCCGTTGGCTTCACGCCATCTTTTGGGCTAAGCTAGCAGGTGGTCCGGGAGGG
GGTCCAGTAGGTCTGAGCGTGCCTCTCAGCATACTCCTGCCTACTGGCCGAAAGTTGAAGTTGCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACAGCAAGACACCCACCACCGCTTCACCCATTATCAGCCCCATTTCTCATCTTTTTCCATCCAAACTTTCAGAGCACCTTAAGGAGAGAGTGAAGGAGGAAGAAGA
AGAAGAATTTCGTGGTTTTGAGGTTGAAGAAGATAAGAAAAGCTCATGCAAAGCCAGCCATAGCAGAATCTGGGTGCAAAACTGTCAACCTCTGGTTTTTTATTCGGTTT
CAGCTACACAGAAGGGAATAAGAGGATTTTCGAGCAAAGCAGGAGGATCTCTGATTTTCTCTGGTTTTTCGAGCATTCTGGGGTGGACAAGTCGAATCCGAAGCTCTATT
TGGCCAAGAGGAAATAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACAATTTCTATTGACTACATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCAC
ACAGGTAAAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGCTCCAGATCAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCTGTCTATTATG
TAAATGTTTTGTTCAACGTTCAGGAGGGTCAGCGGGTATCGTTAGAGGAGGACGATGTCCGTTGGCTTCACGCCATCTTTTGGGCTAAGCTAGCAGGTGGTCCGGGAGGG
GGTCCAGTAGGTCTGAGCGTGCCTCTCAGCATACTCCTGCCTACTGGCCGAAAGTTGAAGTTGCTCTAA
Protein sequenceShow/hide protein sequence
MDSKTPTTASPIISPISHLFPSKLSEHLKERVKEEEEEEFRGFEVEEDKKSSCKASHSRIWVQNCQPLVFYSVSATQKGIRGFSSKAGGSLIFSGFSSILGWTSRIRSSI
WPRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQVKIELPVPDTLPTSAESSRSSSSTWVELYIESVYYVNVLFNVQEGQRVSLEEDDVRWLHAIFWAKLAGGPGG
GPVGLSVPLSILLPTGRKLKLL