; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg011198 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg011198
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTarget of rapamycin complex subunit LST8
Genome locationscaffold5:8212952..8215219
RNA-Seq ExpressionSpg011198
SyntenySpg011198
Gene Ontology termsGO:0031929 - TOR signaling (biological process)
GO:0032956 - regulation of actin cytoskeleton organization (biological process)
GO:0031931 - TORC1 complex (cellular component)
GO:0031932 - TORC2 complex (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR036322 - WD40-repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136587.1 target of rapamycin complex subunit LST8-1 [Cucumis sativus]1.5e-1489.36Show/hide
Query:  GVFEEQASSDTTARLWSMSTGKEMKVYQGHHKATICCALHDGAEPSS
        G +   ASSDTTARLWSMSTGKEMKVYQGHHKATICCALHDGAEPSS
Subjt:  GVFEEQASSDTTARLWSMSTGKEMKVYQGHHKATICCALHDGAEPSS

XP_022154284.1 protein LST8 homolog [Momordica charantia]1.5e-1489.36Show/hide
Query:  GVFEEQASSDTTARLWSMSTGKEMKVYQGHHKATICCALHDGAEPSS
        G +   ASSDTTARLWSMSTGKEMKVYQGHHKATICCALHDGAEPSS
Subjt:  GVFEEQASSDTTARLWSMSTGKEMKVYQGHHKATICCALHDGAEPSS

XP_022935418.1 protein LST8 homolog isoform X2 [Cucurbita moschata]1.5e-1489.36Show/hide
Query:  GVFEEQASSDTTARLWSMSTGKEMKVYQGHHKATICCALHDGAEPSS
        G +   ASSDTTARLWSMSTGKEMKVYQGHHKATICCALHDGAEPSS
Subjt:  GVFEEQASSDTTARLWSMSTGKEMKVYQGHHKATICCALHDGAEPSS

XP_022983032.1 protein LST8 homolog [Cucurbita maxima]1.5e-1489.36Show/hide
Query:  GVFEEQASSDTTARLWSMSTGKEMKVYQGHHKATICCALHDGAEPSS
        G +   ASSDTTARLWSMSTGKEMKVYQGHHKATICCALHDGAEPSS
Subjt:  GVFEEQASSDTTARLWSMSTGKEMKVYQGHHKATICCALHDGAEPSS

XP_038906292.1 target of rapamycin complex subunit LST8-1 [Benincasa hispida]1.8e-1589.58Show/hide
Query:  GVFEEQASSDTTARLWSMSTGKEMKVYQGHHKATICCALHDGAEPSSC
        G +   ASSDTTARLWSMSTGKEMKVYQGHHKATICCALHDGAEPSSC
Subjt:  GVFEEQASSDTTARLWSMSTGKEMKVYQGHHKATICCALHDGAEPSSC

TrEMBL top hitse value%identityAlignment
A0A0A0LH11 Target of rapamycin complex subunit LST87.4e-1589.36Show/hide
Query:  GVFEEQASSDTTARLWSMSTGKEMKVYQGHHKATICCALHDGAEPSS
        G +   ASSDTTARLWSMSTGKEMKVYQGHHKATICCALHDGAEPSS
Subjt:  GVFEEQASSDTTARLWSMSTGKEMKVYQGHHKATICCALHDGAEPSS

A0A5D3DPG8 Target of rapamycin complex subunit LST87.4e-1589.36Show/hide
Query:  GVFEEQASSDTTARLWSMSTGKEMKVYQGHHKATICCALHDGAEPSS
        G +   ASSDTTARLWSMSTGKEMKVYQGHHKATICCALHDGAEPSS
Subjt:  GVFEEQASSDTTARLWSMSTGKEMKVYQGHHKATICCALHDGAEPSS

A0A6J1DLL8 Target of rapamycin complex subunit LST87.4e-1589.36Show/hide
Query:  GVFEEQASSDTTARLWSMSTGKEMKVYQGHHKATICCALHDGAEPSS
        G +   ASSDTTARLWSMSTGKEMKVYQGHHKATICCALHDGAEPSS
Subjt:  GVFEEQASSDTTARLWSMSTGKEMKVYQGHHKATICCALHDGAEPSS

A0A6J1FAK4 Target of rapamycin complex subunit LST87.4e-1589.36Show/hide
Query:  GVFEEQASSDTTARLWSMSTGKEMKVYQGHHKATICCALHDGAEPSS
        G +   ASSDTTARLWSMSTGKEMKVYQGHHKATICCALHDGAEPSS
Subjt:  GVFEEQASSDTTARLWSMSTGKEMKVYQGHHKATICCALHDGAEPSS

A0A6J1IY60 Target of rapamycin complex subunit LST87.4e-1589.36Show/hide
Query:  GVFEEQASSDTTARLWSMSTGKEMKVYQGHHKATICCALHDGAEPSS
        G +   ASSDTTARLWSMSTGKEMKVYQGHHKATICCALHDGAEPSS
Subjt:  GVFEEQASSDTTARLWSMSTGKEMKVYQGHHKATICCALHDGAEPSS

SwissProt top hitse value%identityAlignment
F4IIK6 Non-functional target of rapamycin complex subunit LST8-23.2e-0766.67Show/hide
Query:  GVFEEQASSDTTARLWSMSTGKEMKVYQGHHKATICCAL
        G +   ASSDTTARLWSM  GKE  VYQ H KAT+CC L
Subjt:  GVFEEQASSDTTARLWSMSTGKEMKVYQGHHKATICCAL

O74184 Target of rapamycin complex subunit wat15.1e-0557.14Show/hide
Query:  ASSDTTARLWSMSTGKEMKVYQGHHKATICCALHD
        ASSD  ARLW +S+G+ ++ Y GHHKA +C AL+D
Subjt:  ASSDTTARLWSMSTGKEMKVYQGHHKATICCALHD

Q9AYE4 Target of rapamycin complex subunit LST81.1e-1065.91Show/hide
Query:  GVFEEQASSDTTARLWSMSTGKEMKVYQGHHKATICCALHDGAE
        G +   ASSDTTARLW+MSTG+ ++VY  HHK  +CCALHDGAE
Subjt:  GVFEEQASSDTTARLWSMSTGKEMKVYQGHHKATICCALHDGAE

Q9LV27 Target of rapamycin complex subunit LST8-11.3e-1178.05Show/hide
Query:  GVFEEQASSDTTARLWSMSTGKEMKVYQGHHKATICCALHD
        G F   ASSD TARLWSM  GKE+KVYQGHHKAT+CCALHD
Subjt:  GVFEEQASSDTTARLWSMSTGKEMKVYQGHHKATICCALHD

Arabidopsis top hitse value%identityAlignment
AT2G22040.1 Transducin/WD40 repeat-like superfamily protein2.3e-0866.67Show/hide
Query:  GVFEEQASSDTTARLWSMSTGKEMKVYQGHHKATICCAL
        G +   ASSDTTARLWSM  GKE  VYQ H KAT+CC L
Subjt:  GVFEEQASSDTTARLWSMSTGKEMKVYQGHHKATICCAL

AT3G18140.1 Transducin/WD40 repeat-like superfamily protein8.9e-1378.05Show/hide
Query:  GVFEEQASSDTTARLWSMSTGKEMKVYQGHHKATICCALHD
        G F   ASSD TARLWSM  GKE+KVYQGHHKAT+CCALHD
Subjt:  GVFEEQASSDTTARLWSMSTGKEMKVYQGHHKATICCALHD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCATCTGAGCTCTCGAGGGAGAAGCAAAGTAAAAAAGAAGAAGTCGATGAAAGAAATTAAGAATCAAGAGAGAAGGGGAGATGTAGGAGGCATCGGAAAATATGA
CGCCCATACAAAGAGGAGGGACAAAAACCAAAAGAACGAGGAGCTAATGAAAAAAGTTAAGAAGCAGAAGCGATGGATGGGAGGTCAATACCGAAGTTCGAAGAAGGGAG
GTCAATGTGCAATCTACCGCCACTTGAAAACCGTGCATGAACGGGCTGGAGAGTGTTTCGAAATGTTGAATGCTGGATTTTCGATGCAGGATCTTCGACCTAGTTTGAAG
GGGGACGGTTTAGCAGTCGCAAGGCTCGAAAGAGAAGAAGAGAAAGTGACAACAGAGGCCAGGATCGACTATTACTTGTATGGTTGGAGGCGAAGTCAGGTGGTGGAAGG
AATTGAGAGGGAAGAACATGAAGAGATCCATGAAGGAGGCGATCACCGGCGACGAAGGCAAGCGGGGTCGGAGATGAAGTCGCAGGGAAGAACTTCTACCCACGTGAAGA
GTCTTCCTGCCGTTGTACTTCGCCAACAATTGCCGCTTGCAGCATTGCAAACCGTCGTCGCCTACAACGTCACCAAGGTCCGTTGTTGCCTACAGTGTCACCAACTGCCG
TCGTCATCGCCACCTGTAGAGTCTCTGCTGACCAAACCAGCTCACCACCACCGCCACAACGGGTCGTTGGAACGACAAGGTGTCTTTGAAGAGCAAGCTTCTTCTGATAC
TACTGCAAGACTCTGGTCCATGTCAACTGGCAAAGAGATGAAGGTTTACCAAGGTCATCATAAAGCAACTATTTGTTGTGCTCTACATGATGGAGCTGAACCGTCATCGT
GTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCATCTGAGCTCTCGAGGGAGAAGCAAAGTAAAAAAGAAGAAGTCGATGAAAGAAATTAAGAATCAAGAGAGAAGGGGAGATGTAGGAGGCATCGGAAAATATGA
CGCCCATACAAAGAGGAGGGACAAAAACCAAAAGAACGAGGAGCTAATGAAAAAAGTTAAGAAGCAGAAGCGATGGATGGGAGGTCAATACCGAAGTTCGAAGAAGGGAG
GTCAATGTGCAATCTACCGCCACTTGAAAACCGTGCATGAACGGGCTGGAGAGTGTTTCGAAATGTTGAATGCTGGATTTTCGATGCAGGATCTTCGACCTAGTTTGAAG
GGGGACGGTTTAGCAGTCGCAAGGCTCGAAAGAGAAGAAGAGAAAGTGACAACAGAGGCCAGGATCGACTATTACTTGTATGGTTGGAGGCGAAGTCAGGTGGTGGAAGG
AATTGAGAGGGAAGAACATGAAGAGATCCATGAAGGAGGCGATCACCGGCGACGAAGGCAAGCGGGGTCGGAGATGAAGTCGCAGGGAAGAACTTCTACCCACGTGAAGA
GTCTTCCTGCCGTTGTACTTCGCCAACAATTGCCGCTTGCAGCATTGCAAACCGTCGTCGCCTACAACGTCACCAAGGTCCGTTGTTGCCTACAGTGTCACCAACTGCCG
TCGTCATCGCCACCTGTAGAGTCTCTGCTGACCAAACCAGCTCACCACCACCGCCACAACGGGTCGTTGGAACGACAAGGTGTCTTTGAAGAGCAAGCTTCTTCTGATAC
TACTGCAAGACTCTGGTCCATGTCAACTGGCAAAGAGATGAAGGTTTACCAAGGTCATCATAAAGCAACTATTTGTTGTGCTCTACATGATGGAGCTGAACCGTCATCGT
GTTGA
Protein sequenceShow/hide protein sequence
MKHLSSRGRSKVKKKKSMKEIKNQERRGDVGGIGKYDAHTKRRDKNQKNEELMKKVKKQKRWMGGQYRSSKKGGQCAIYRHLKTVHERAGECFEMLNAGFSMQDLRPSLK
GDGLAVARLEREEEKVTTEARIDYYLYGWRRSQVVEGIEREEHEEIHEGGDHRRRRQAGSEMKSQGRTSTHVKSLPAVVLRQQLPLAALQTVVAYNVTKVRCCLQCHQLP
SSSPPVESLLTKPAHHHRHNGSLERQGVFEEQASSDTTARLWSMSTGKEMKVYQGHHKATICCALHDGAEPSSC