CuGenDBv2

Gene ID	Spg011199
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	DDE Tnp4 domain-containing protein
Genome location	scaffold5:7835804..7841818
RNA-Seq Expression	Spg011199
Synteny	Spg011199
Gene Ontology terms	GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR040344 - Uncharacterized protein At3g17950-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6584313.1 hypothetical protein SDJN03_20245, partial [Cucurbita argyrosperma subsp. sororia]

5.0e-45

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Query:  QNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDDFLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLFADGR
        QNRDQHAAA A+     GGSRKSKKPKRKTT AP LVADRKRRWWRLCRDDGVKP SL +FLEVERRF DGAF+GNAVDLEGVV+ DQQRNGR+LFADGR
Subjt:  QNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDDFLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLFADGR

Query:  VLPPAQTEEEASAAGLYADF
        VLPPAQT+E+ SAAG    F
Subjt:  VLPPAQTEEEASAAGLYADF

XP_016899568.1 PREDICTED: uncharacterized protein At3g17950 isoform X2 [Cucumis melo]

5.5e-44

79.17

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Query:  QNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDDFLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLFADGR
        QNRDQH AA  +     GGSRKSKK KRKTTTAP LVADRKRRWWRLCRDDGVKP SL +FLEVERRF DGAFYGNAVDLEGVV  DQQRNGR+LFADGR
Subjt:  QNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDDFLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLFADGR

Query:  VLPPAQTEEEASAAGLYADF
        VLPPAQTEE+ SA G    F
Subjt:  VLPPAQTEEEASAAGLYADF

XP_022924210.1 uncharacterized protein At3g17950 [Cucurbita moschata]

2.2e-45

80.83

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Query:  QNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDDFLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLFADGR
        QNRDQHAAA A+     GGSRKSKKPKRKTT AP LVADRKRRWWRLCRDDGVKP SL +FLEVERRF DGAF+GNAVDLEGVV+ DQQRNGR+LFADGR
Subjt:  QNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDDFLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLFADGR

Query:  VLPPAQTEEEASAAGLYADF
        VLPPAQTEE+ SAAG    F
Subjt:  VLPPAQTEEEASAAGLYADF

XP_023520118.1 uncharacterized protein At3g17950-like [Cucurbita pepo subsp. pepo]

5.0e-45

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Query:  QNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDDFLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLFADGR
        QNRDQH+AA A+     GGSRKSKKPKRKTT AP LVADRKRRWWRLCRDDGVKP SL +FLEVERRF DGAF+GNAVDLEGVV+ DQQRNGR+LFADGR
Subjt:  QNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDDFLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLFADGR

Query:  VLPPAQTEEEASAAGLYADF
        VLPPAQTEE+ SAAG    F
Subjt:  VLPPAQTEEEASAAGLYADF

XP_038895169.1 uncharacterized protein At3g17950 [Benincasa hispida]

3.2e-44

79.17

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Query:  QNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDDFLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLFADGR
        QNRDQH AA A+     GGSRKSKK KRKT+TAP LVADRKRRWWRLCRDDGVKP SL +FLEVERRF DGAFYGNAVDLEGVVA DQQRNGR+LFADGR
Subjt:  QNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDDFLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLFADGR

Query:  VLPPAQTEEEASAAGLYADF
        VLPPA+TE++ SAAG    F
Subjt:  VLPPAQTEEEASAAGLYADF

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CPP8 uncharacterized protein At3g17950 isoform X1

2.7e-44

79.17

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Query:  QNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDDFLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLFADGR
        QNRDQH AA  +     GGSRKSKK KRKTTTAP LVADRKRRWWRLCRDDGVKP SL +FLEVERRF DGAFYGNAVDLEGVV  DQQRNGR+LFADGR
Subjt:  QNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDDFLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLFADGR

Query:  VLPPAQTEEEASAAGLYADF
        VLPPAQTEE+ SA G    F
Subjt:  VLPPAQTEEEASAAGLYADF

A0A1S4DUB1 uncharacterized protein At3g17950 isoform X2

2.7e-44

79.17

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Query:  QNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDDFLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLFADGR
        QNRDQH AA  +     GGSRKSKK KRKTTTAP LVADRKRRWWRLCRDDGVKP SL +FLEVERRF DGAFYGNAVDLEGVV  DQQRNGR+LFADGR
Subjt:  QNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDDFLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLFADGR

Query:  VLPPAQTEEEASAAGLYADF
        VLPPAQTEE+ SA G    F
Subjt:  VLPPAQTEEEASAAGLYADF

A0A5D3BLI7 Putative nuclease HARBI1

2.7e-44

79.17

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Query:  QNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDDFLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLFADGR
        QNRDQH AA  +     GGSRKSKK KRKTTTAP LVADRKRRWWRLCRDDGVKP SL +FLEVERRF DGAFYGNAVDLEGVV  DQQRNGR+LFADGR
Subjt:  QNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDDFLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLFADGR

Query:  VLPPAQTEEEASAAGLYADF
        VLPPAQTEE+ SA G    F
Subjt:  VLPPAQTEEEASAAGLYADF

A0A6J1E8Y2 uncharacterized protein At3g17950

1.1e-45

80.83

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Query:  QNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDDFLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLFADGR
        QNRDQHAAA A+     GGSRKSKKPKRKTT AP LVADRKRRWWRLCRDDGVKP SL +FLEVERRF DGAF+GNAVDLEGVV+ DQQRNGR+LFADGR
Subjt:  QNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDDFLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLFADGR

Query:  VLPPAQTEEEASAAGLYADF
        VLPPAQTEE+ SAAG    F
Subjt:  VLPPAQTEEEASAAGLYADF

A0A6J1KNQ0 uncharacterized protein At3g17950-like

2.3e-43

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Query:  QNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDDFLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLFADGR
        QNRDQH AA  + AG  GGSRKSKKPKRKTT AP LVADRKRRWWRLCRDDGVKP SL +FLEVERRF DGAF+ NAVDLEGVV+ DQQRNGR LFADGR
Subjt:  QNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDDFLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLFADGR

Query:  VLPPAQTEEEASAAGLYADF
        VLPPAQTEE+ SAAG    F
Subjt:  VLPPAQTEEEASAAGLYADF

SwissProt top hits

e value

%identity

Alignment

Q6DR24 Uncharacterized protein At3g17950

5.4e-10

36.92

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Query:  RQNRDQHAAANASVA-GGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDD-------GV-------KPTSLDDFLEVERRFEDGAFYGNA-VDLEGV
        R +  +H + + +++      +R++ + KR  + +      R+R+WWR CRDD       G+       K +SL ++LEVERRF D A Y +A  +LE  
Subjt:  RQNRDQHAAANASVA-GGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDD-------GV-------KPTSLDDFLEVERRFEDGAFYGNA-VDLEGV

Query:  VAV---DQQ--RNGRNLFADGRVLPPAQTE
        V     DQQ     R LFADGRVLPPA  E
Subjt:  VAV---DQQ--RNGRNLFADGRVLPPAQTE

Arabidopsis top hits

e value

%identity

Alignment

AT3G17950.1 unknown protein

3.9e-11

36.92

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Query:  RQNRDQHAAANASVA-GGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDD-------GV-------KPTSLDDFLEVERRFEDGAFYGNA-VDLEGV
        R +  +H + + +++      +R++ + KR  + +      R+R+WWR CRDD       G+       K +SL ++LEVERRF D A Y +A  +LE  
Subjt:  RQNRDQHAAANASVA-GGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDD-------GV-------KPTSLDDFLEVERRFEDGAFYGNA-VDLEGV

Query:  VAV---DQQ--RNGRNLFADGRVLPPAQTE
        V     DQQ     R LFADGRVLPPA  E
Subjt:  VAV---DQQ--RNGRNLFADGRVLPPAQTE

AT3G17950.2 unknown protein

3.9e-11

36.92

Show/hide

Query:  RQNRDQHAAANASVA-GGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDD-------GV-------KPTSLDDFLEVERRFEDGAFYGNA-VDLEGV
        R +  +H + + +++      +R++ + KR  + +      R+R+WWR CRDD       G+       K +SL ++LEVERRF D A Y +A  +LE  
Subjt:  RQNRDQHAAANASVA-GGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDD-------GV-------KPTSLDDFLEVERRFEDGAFYGNA-VDLEGV

Query:  VAV---DQQ--RNGRNLFADGRVLPPAQTE
        V     DQQ     R LFADGRVLPPA  E
Subjt:  VAV---DQQ--RNGRNLFADGRVLPPAQTE

Sequences

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CDS sequence

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ATGGGTGAGAGTGGCCAATACGCCGACTCAATATGCCTTCTTTTTGGGGACAAGACCGAGTGGGAGGCTGGGGACATGACAACACAAGAAGGAATTCACTCCTTCCCACA
TCTAAGAGAAGTAGATGAGTGTCCATTAGGTCCCCCTGCTAGCTCGGGGGGGGCGCTGCTACACGAAGAACAAAATGGGAAGAAAAATCGAGGGGGGCGGGGCGCTGCTA
CACAAAGAATAAAATGGGAAAATCACCTCCGGCGTGAGCTTCAACGTCGTCATCAATGGGAAGAAGAAGATCGAGGGGAGGGCGCTGCTACACGAATGGAGAATGGGAAG
AAAAATCGATGGGCGGCGCTGCTACACGAAGAAGAAAAGGGGGCTGCTACACAGAGAAGAAAATGGGAAGAAAAGTGTGGGCTAGGTCGACAGAACCGAGACCAACACGC
CGCCGCGAACGCCTCCGTCGCAGGTGGCAGGGGCGGTTCCCGAAAGAGCAAGAAGCCGAAGAGAAAAACGACGACGGCGCCGACACTGGTCGCAGATCGGAAGCGGAGGT
GGTGGCGGCTGTGCAGGGACGACGGCGTTAAGCCGACATCTCTCGATGATTTTCTCGAGGTGGAACGGAGATTTGAGGACGGTGCTTTTTATGGCAACGCAGTGGATCTG
GAAGGCGTGGTTGCGGTGGATCAACAAAGGAATGGGCGGAATTTGTTCGCCGACGGGAGAGTTCTACCGCCGGCGCAAACAGAGGAAGAAGCCTCGGCGGCGGGGCTCTA
TGCCGATTTTCCGAGCTGGCGAGGACAACCCGACAAGAGCCCAGAAGTAGGACTGGAAAATGGACTCCGGAGGCGAAACGGGCCAAAAGGTCGGAGGGACCGGGCCTTGG
CCCGACCCATATGGTTGGCCTCGGCCCGAGGTCGAGGTCAACCATGGGTCGAGTCCTTCCGCCTCCGTTCGGTCCCTGCTGCCCCTGGCCTTCCCGGTTCCACCTGGTCA
GGGGCGGATTTATTTGTGCCCCCCCTAGCAACAAGTTCTGGATCCGCCACTGCACCTGGTTCAGCCCGAATCGCCTTCGAATGCCTAAAAACCCTAGAGCAGGAACAGAT
ATTTAAACCCTTCTTCATCACTGCAGAAAGGATCCCGAACTCTACTCTCAATTCTCTCTTCTTGCTCTCCTCCTTCCGCTTTCTGACTTAA

mRNA sequence

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Protein sequence

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MGESGQYADSICLLFGDKTEWEAGDMTTQEGIHSFPHLREVDECPLGPPASSGGALLHEEQNGKKNRGGRGAATQRIKWENHLRRELQRRHQWEEEDRGEGAATRMENGK
KNRWAALLHEEEKGAATQRRKWEEKCGLGRQNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDDFLEVERRFEDGAFYGNAVDL
EGVVAVDQQRNGRNLFADGRVLPPAQTEEEASAAGLYADFPSWRGQPDKSPEVGLENGLRRRNGPKGRRDRALARPIWLASARGRGQPWVESFRLRSVPAAPGLPGSTWS
GADLFVPPLATSSGSATAPGSARIAFECLKTLEQEQIFKPFFITAERIPNSTLNSLFLLSSFRFLT

Spg011199 (gene) of Sponge gourd (cylindrica) v1 genome