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Spg011203 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg011203
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTarget of rapamycin complex subunit LST8
Genome locationscaffold5:8210127..8212870
RNA-Seq ExpressionSpg011203
SyntenySpg011203
Gene Ontology termsGO:0031929 - TOR signaling (biological process)
GO:0032956 - regulation of actin cytoskeleton organization (biological process)
GO:0031931 - TORC1 complex (cellular component)
GO:0031932 - TORC2 complex (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OVA16502.1 WD40 repeat [Macleaya cordata]8.2e-1197.22Show/hide
Query:  VPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLTP
        VPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRL P
Subjt:  VPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLTP

XP_010653807.1 PREDICTED: protein LST8 homolog isoform X4 [Vitis vinifera]5.1e-1351.65Show/hide
Query:  VPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRL-------------------------------------TPTLGVGLRFLSRWCISYNS
        VPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRL                                     T  LGVGL FL  WC+SY+S
Subjt:  VPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRL-------------------------------------TPTLGVGLRFLSRWCISYNS

XP_015942869.1 protein LST8 homolog isoform X2 [Arachis duranensis]9.7e-1248.91Show/hide
Query:  VPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRL--------------------------------------TPTLGVGLRFLSRWCISYNS
        VPEVDTAVRSLTVMWDGSLVVAANN+GTCYVWRL                                      +  LGVGL  L RWC+ YNS
Subjt:  VPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRL--------------------------------------TPTLGVGLRFLSRWCISYNS

XP_024027235.1 target of rapamycin complex subunit wat1 isoform X3 [Morus notabilis]3.7e-1170.91Show/hide
Query:  GKKNTYEGVSLGRLDSLSPLPVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRL
        G +  YE  +      L P  VPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRL
Subjt:  GKKNTYEGVSLGRLDSLSPLPVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRL

XP_042496968.1 target of rapamycin complex subunit LST8 isoform X2 [Macadamia integrifolia]3.7e-1170.91Show/hide
Query:  GKKNTYEGVSLGRLDSLSPLPVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRL
        G +  YE  +      L P  VPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRL
Subjt:  GKKNTYEGVSLGRLDSLSPLPVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRL

TrEMBL top hitse value%identityAlignment
A0A200R1A3 Target of rapamycin complex subunit LST84.0e-1197.22Show/hide
Query:  VPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLTP
        VPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRL P
Subjt:  VPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLTP

A0A2J6LHQ6 WD_REPEATS_REGION domain-containing protein2.0e-1069.09Show/hide
Query:  GKKNTYEGVSLGRLDSLSPLPVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRL
        G +  YE  +      L P  VPEVDTAVRSLTVMWDGSLVVAANN GTCYVWRL
Subjt:  GKKNTYEGVSLGRLDSLSPLPVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRL

A0A6A6NKF2 WD_REPEATS_REGION domain-containing protein1.5e-1069.09Show/hide
Query:  GKKNTYEGVSLGRLDSLSPLPVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRL
        G +  YE  +      L P  VPEVDTAVRSLTVMWDGSLVVAANN GTCYVWRL
Subjt:  GKKNTYEGVSLGRLDSLSPLPVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRL

A0A6J1IY60 Target of rapamycin complex subunit LST82.6e-10100Show/hide
Query:  VPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRL
        VPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRL
Subjt:  VPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRL

A0A6P4BIN5 protein LST8 homolog isoform X24.7e-1248.91Show/hide
Query:  VPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRL--------------------------------------TPTLGVGLRFLSRWCISYNS
        VPEVDTAVRSLTVMWDGSLVVAANN+GTCYVWRL                                      +  LGVGL  L RWC+ YNS
Subjt:  VPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRL--------------------------------------TPTLGVGLRFLSRWCISYNS

SwissProt top hitse value%identityAlignment
F4IIK6 Non-functional target of rapamycin complex subunit LST8-23.6e-0969.05Show/hide
Query:  RLDSLSPLPVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWR
        R D  S   VPEV T +RSLTVMWDG++VVAAN+ GTCYVWR
Subjt:  RLDSLSPLPVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWR

O74184 Target of rapamycin complex subunit wat11.6e-0447.62Show/hide
Query:  VPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLTPTLGVGL
        +PE D  + S+TV  DGS+++A NN G CYVWR+    G  L
Subjt:  VPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLTPTLGVGL

Q9AYE4 Target of rapamycin complex subunit LST81.0e-1194.12Show/hide
Query:  VPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRL
        VPEVDTAVRSLTVMWDGS+VVAANN GTCYVWRL
Subjt:  VPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRL

Q9LV27 Target of rapamycin complex subunit LST8-17.7e-1279.07Show/hide
Query:  RLDSLSPLPVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRL
        R +S S   VPEVDTAVRSLTVMWDG++VVAANN GTCYVWRL
Subjt:  RLDSLSPLPVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRL

Arabidopsis top hitse value%identityAlignment
AT2G22040.1 Transducin/WD40 repeat-like superfamily protein2.5e-1069.05Show/hide
Query:  RLDSLSPLPVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWR
        R D  S   VPEV T +RSLTVMWDG++VVAAN+ GTCYVWR
Subjt:  RLDSLSPLPVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWR

AT3G18140.1 Transducin/WD40 repeat-like superfamily protein5.5e-1379.07Show/hide
Query:  RLDSLSPLPVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRL
        R +S S   VPEVDTAVRSLTVMWDG++VVAANN GTCYVWRL
Subjt:  RLDSLSPLPVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRL

AT3G18140.2 Transducin/WD40 repeat-like superfamily protein5.5e-1379.07Show/hide
Query:  RLDSLSPLPVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRL
        R +S S   VPEVDTAVRSLTVMWDG++VVAANN GTCYVWRL
Subjt:  RLDSLSPLPVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGAATAATTGGGATGGACAATAGATCTCCATCTACTTCCAATACTTCTGGAAAAGTTGATAGAGAAAACAAAGAATTTGATGCTTCAGGGGATGAGGATGTCTT
AAATTCTTCAGATCTTTTGGAGTATCTTTCTGTGGACAAGAAGAAACAATCATCAAAAGGATTGGGAAAAAAAAACACTTATGAAGGAGTCAGTTTGGGGCGGCTGGATT
CTCTCTCCCCCTTGCCCGTGCCAGAAGTGGATACAGCTGTAAGATCTTTGACGGTTATGTGGGATGGGAGCTTGGTAGTTGCAGCAAATAATCATGGCACATGTTATGTC
TGGCGCTTGACACCAACGCTGGGTGTGGGACTGCGTTTTCTCAGTAGATGGTGCATATCTTATAACAGTGTTTGGGTACCTAACAAATTGGTACCAGAGCACATTCTTCC
TCGAGCATCGATAATGGAGTTTGATCGTAAGATGGAGTTACACTTGGAAGCAATACAACAAGGGATCAAGGGAGTACAACAAATCTTAGAACAAATGCAAAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGATAGAATAATTGGGATGGACAATAGATCTCCATCTACTTCCAATACTTCTGGAAAAGTTGATAGAGAAAACAAAGAATTTGATGCTTCAGGGGATGAGGATGTCTT
AAATTCTTCAGATCTTTTGGAGTATCTTTCTGTGGACAAGAAGAAACAATCATCAAAAGGATTGGGAAAAAAAAACACTTATGAAGGAGTCAGTTTGGGGCGGCTGGATT
CTCTCTCCCCCTTGCCCGTGCCAGAAGTGGATACAGCTGTAAGATCTTTGACGGTTATGTGGGATGGGAGCTTGGTAGTTGCAGCAAATAATCATGGCACATGTTATGTC
TGGCGCTTGACACCAACGCTGGGTGTGGGACTGCGTTTTCTCAGTAGATGGTGCATATCTTATAACAGTGTTTGGGTACCTAACAAATTGGTACCAGAGCACATTCTTCC
TCGAGCATCGATAATGGAGTTTGATCGTAAGATGGAGTTACACTTGGAAGCAATACAACAAGGGATCAAGGGAGTACAACAAATCTTAGAACAAATGCAAAAATAG
Protein sequenceShow/hide protein sequence
MDRIIGMDNRSPSTSNTSGKVDRENKEFDASGDEDVLNSSDLLEYLSVDKKKQSSKGLGKKNTYEGVSLGRLDSLSPLPVPEVDTAVRSLTVMWDGSLVVAANNHGTCYV
WRLTPTLGVGLRFLSRWCISYNSVWVPNKLVPEHILPRASIMEFDRKMELHLEAIQQGIKGVQQILEQMQK