; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg011325 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg011325
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionG-patch domain-containing protein
Genome locationscaffold8:11111444..11114722
RNA-Seq ExpressionSpg011325
SyntenySpg011325
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR000467 - G-patch domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY18289.1 Uncharacterized protein TCM_042889 [Theobroma cacao]1.0e-2232.96Show/hide
Query:  VNMILGEDTSVKDSCKPEPLIIFFKEQPSGVQTDLTISQPLTIQIPSSYKYKDNKAVPWNYGCH--------GLNEEAAIVTNISGISGMIKSGRASMMV
        VNMI  E T      K +PL IF++ +   V+        + I++P  + YKDNKAVPWNY C+         + E      NI+G  G+ +SGR     
Subjt:  VNMILGEDTSVKDSCKPEPLIIFFKEQPSGVQTDLTISQPLTIQIPSSYKYKDNKAVPWNYGCH--------GLNEEAAIVTNISGISGMIKSGRASMMV

Query:  A------------------KTMMKEGFEPGEGLGKYQQGRRQPICLPKAVEKFGLGYKPTVVDSKNVQEEKRKQRSSRLENREVSTKRMIIPHLYETFKK
        A                  + ++ +G+  G GLGK  QG R PI   K  E+FGLGYK T  + + +  E+RK+R +R +  E+  + M  PHLY+TF+ 
Subjt:  A------------------KTMMKEGFEPGEGLGKYQQGRRQPICLPKAVEKFGLGYKPTVVDSKNVQEEKRKQRSSRLENREVSTKRMIIPHLYETFKK

Query:  ------------SKVKADKLVLEMSDLSI--TAIIEEHVESVDSL--VYKCPPGFELCNWESTELPI
                    ++     L    SDLSI  TA  EE   +VD +   Y  PP  +L NW +  LP+
Subjt:  ------------SKVKADKLVLEMSDLSI--TAIIEEHVESVDSL--VYKCPPGFELCNWESTELPI

EOY26229.1 Uncharacterized protein TCM_027675 [Theobroma cacao]2.0e-2129.49Show/hide
Query:  VNMILGEDTSVKDSCKPEPLIIFFKEQPSGVQTDLTISQPLTIQIPSSYKYKDNKAVPWNYGC--------HGLNEEAAIVTNISGISGMIKSG------
        VNMI  E T      K +PL IF+  +P G   +      + I++P  + YKD+KAVPWNY C          + E      NI+G+ G+ +SG      
Subjt:  VNMILGEDTSVKDSCKPEPLIIFFKEQPSGVQTDLTISQPLTIQIPSSYKYKDNKAVPWNYGC--------HGLNEEAAIVTNISGISGMIKSG------

Query:  ----------------------------------------RASMMVAKTMMKEGFEPGEGLGKYQQGRRQPICLPKAVEKFGLGYKPTVVDSKNVQEEKR
                                                R + MV   ++ +G+  G GLGK  QG R P+   K  E+FGLGYKPT  + + +  E+R
Subjt:  ----------------------------------------RASMMVAKTMMKEGFEPGEGLGKYQQGRRQPICLPKAVEKFGLGYKPTVVDSKNVQEEKR

Query:  KQRSSRLENREVSTKRMIIPHLYETFKK------------SKVKADKLVLEMSDLSITAII--EEHVESVDSL--VYKCPPGFELCNWESTELPI
        K+R +R +  E+  + M  PH YETF+             ++     L    SDLSI A    EE   +VD +   Y  PP  +L +W +  LP+
Subjt:  KQRSSRLENREVSTKRMIIPHLYETFKK------------SKVKADKLVLEMSDLSITAII--EEHVESVDSL--VYKCPPGFELCNWESTELPI

KAA0033221.1 uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]2.6e-2146.72Show/hide
Query:  RASMMVAKTMMKEGFEPGEGLGKYQQGRRQPICLPKAVEKFGLGYKPTVVDSKNVQEEKRKQRSSRLENREVSTKRMIIPHLYETFKKSKVKAD----KL
        + S+M+AKTM+K GF+  +GLGK  QG  + I LPKA EKFGLGYKP   + + V+ +K+++RS+ L   E+  +R+ IPHL ETFK  ++  D    K 
Subjt:  RASMMVAKTMMKEGFEPGEGLGKYQQGRRQPICLPKAVEKFGLGYKPTVVDSKNVQEEKRKQRSSRLENREVSTKRMIIPHLYETFKKSKVKAD----KL

Query:  VLEMSDLSITAIIEEHVESVDSLVYKCPPGFELCNWE
          E S++ I A++ E+      LV+KCPPGFEL NWE
Subjt:  VLEMSDLSITAIIEEHVESVDSLVYKCPPGFELCNWE

KAA0061241.1 uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa]1.5e-2146.72Show/hide
Query:  RASMMVAKTMMKEGFEPGEGLGKYQQGRRQPICLPKAVEKFGLGYKPTVVDSKNVQEEKRKQRSSRLENREVSTKRMIIPHLYETFKKSKVKAD----KL
        + S+M+AKTM+K GF+  +GLGK  QG  + I LPKA E FGLGYKP   + + V+ +K+++RS+ L   E+  +R+ IPHL ETFK  ++  D    K 
Subjt:  RASMMVAKTMMKEGFEPGEGLGKYQQGRRQPICLPKAVEKFGLGYKPTVVDSKNVQEEKRKQRSSRLENREVSTKRMIIPHLYETFKKSKVKAD----KL

Query:  VLEMSDLSITAIIEEHVESVDSLVYKCPPGFELCNWE
          E S++SI A++ E++     LV+KCPPGFEL NWE
Subjt:  VLEMSDLSITAIIEEHVESVDSLVYKCPPGFELCNWE

XP_022157707.1 uncharacterized protein LOC111024360 [Momordica charantia]3.8e-2562.37Show/hide
Query:  NEPEIHFVNMILGEDTSVKDSCKPEPLIIFFKEQPSGVQTDLTISQPLTIQIPSSYKYKDNKAVPWNYGCHGLNEEAAIVTNISGISGMIKSG
        N+ E HFVNM+  E+ S K S K EPL++ FKEQP+ +  + +I QPLTIQ+PS YKYKDNKAVPW+YGCH L+EE +IVTNIS +SGM +SG
Subjt:  NEPEIHFVNMILGEDTSVKDSCKPEPLIIFFKEQPSGVQTDLTISQPLTIQIPSSYKYKDNKAVPWNYGCHGLNEEAAIVTNISGISGMIKSG

TrEMBL top hitse value%identityAlignment
A0A061GGS1 Uncharacterized protein9.5e-2229.49Show/hide
Query:  VNMILGEDTSVKDSCKPEPLIIFFKEQPSGVQTDLTISQPLTIQIPSSYKYKDNKAVPWNYGC--------HGLNEEAAIVTNISGISGMIKSG------
        VNMI  E T      K +PL IF+  +P G   +      + I++P  + YKD+KAVPWNY C          + E      NI+G+ G+ +SG      
Subjt:  VNMILGEDTSVKDSCKPEPLIIFFKEQPSGVQTDLTISQPLTIQIPSSYKYKDNKAVPWNYGC--------HGLNEEAAIVTNISGISGMIKSG------

Query:  ----------------------------------------RASMMVAKTMMKEGFEPGEGLGKYQQGRRQPICLPKAVEKFGLGYKPTVVDSKNVQEEKR
                                                R + MV   ++ +G+  G GLGK  QG R P+   K  E+FGLGYKPT  + + +  E+R
Subjt:  ----------------------------------------RASMMVAKTMMKEGFEPGEGLGKYQQGRRQPICLPKAVEKFGLGYKPTVVDSKNVQEEKR

Query:  KQRSSRLENREVSTKRMIIPHLYETFKK------------SKVKADKLVLEMSDLSITAII--EEHVESVDSL--VYKCPPGFELCNWESTELPI
        K+R +R +  E+  + M  PH YETF+             ++     L    SDLSI A    EE   +VD +   Y  PP  +L +W +  LP+
Subjt:  KQRSSRLENREVSTKRMIIPHLYETFKK------------SKVKADKLVLEMSDLSITAII--EEHVESVDSL--VYKCPPGFELCNWESTELPI

A0A5A7SUT0 Reverse transcriptase1.2e-2146.72Show/hide
Query:  RASMMVAKTMMKEGFEPGEGLGKYQQGRRQPICLPKAVEKFGLGYKPTVVDSKNVQEEKRKQRSSRLENREVSTKRMIIPHLYETFKKSKVKAD----KL
        + S+M+AKTM+K GF+  +GLGK  QG  + I LPKA EKFGLGYKP   + + V+ +K+++RS+ L   E+  +R+ IPHL ETFK  ++  D    K 
Subjt:  RASMMVAKTMMKEGFEPGEGLGKYQQGRRQPICLPKAVEKFGLGYKPTVVDSKNVQEEKRKQRSSRLENREVSTKRMIIPHLYETFKKSKVKAD----KL

Query:  VLEMSDLSITAIIEEHVESVDSLVYKCPPGFELCNWE
          E S++ I A++ E+      LV+KCPPGFEL NWE
Subjt:  VLEMSDLSITAIIEEHVESVDSLVYKCPPGFELCNWE

A0A5A7TI68 Uncharacterized protein1.6e-2143.79Show/hide
Query:  AIVTNISGISGMIKSGRASMMVAKTMMKEGFEPGEGLGKYQQGRRQPICLPKAVEKFGLGYKPTVVDSKNVQEEKRKQRSSRLENREVSTKRMIIPHLYE
        A +  I G+S      + S+M+AKTM+K  F+  +GLGK  QG  + I LPKA EKFGLGYKP   + + V+ +K+++RS+ L   E+  +R+ IPHL+E
Subjt:  AIVTNISGISGMIKSGRASMMVAKTMMKEGFEPGEGLGKYQQGRRQPICLPKAVEKFGLGYKPTVVDSKNVQEEKRKQRSSRLENREVSTKRMIIPHLYE

Query:  TFKKSKVKAD----KLVLEMSDLSITAIIEEHVESVDSLVYKCPPGFELCNWE
        TFK  ++  D    K   E S++SI A++ E+      LV++CPPGFEL NWE
Subjt:  TFKKSKVKAD----KLVLEMSDLSITAIIEEHVESVDSLVYKCPPGFELCNWE

A0A5A7V681 Retrotrans_gag domain-containing protein7.3e-2246.72Show/hide
Query:  RASMMVAKTMMKEGFEPGEGLGKYQQGRRQPICLPKAVEKFGLGYKPTVVDSKNVQEEKRKQRSSRLENREVSTKRMIIPHLYETFKKSKVKAD----KL
        + S+M+AKTM+K GF+  +GLGK  QG  + I LPKA E FGLGYKP   + + V+ +K+++RS+ L   E+  +R+ IPHL ETFK  ++  D    K 
Subjt:  RASMMVAKTMMKEGFEPGEGLGKYQQGRRQPICLPKAVEKFGLGYKPTVVDSKNVQEEKRKQRSSRLENREVSTKRMIIPHLYETFKKSKVKAD----KL

Query:  VLEMSDLSITAIIEEHVESVDSLVYKCPPGFELCNWE
          E S++SI A++ E++     LV+KCPPGFEL NWE
Subjt:  VLEMSDLSITAIIEEHVESVDSLVYKCPPGFELCNWE

A0A6J1DV70 uncharacterized protein LOC1110243601.8e-2562.37Show/hide
Query:  NEPEIHFVNMILGEDTSVKDSCKPEPLIIFFKEQPSGVQTDLTISQPLTIQIPSSYKYKDNKAVPWNYGCHGLNEEAAIVTNISGISGMIKSG
        N+ E HFVNM+  E+ S K S K EPL++ FKEQP+ +  + +I QPLTIQ+PS YKYKDNKAVPW+YGCH L+EE +IVTNIS +SGM +SG
Subjt:  NEPEIHFVNMILGEDTSVKDSCKPEPLIIFFKEQPSGVQTDLTISQPLTIQIPSSYKYKDNKAVPWNYGCHGLNEEAAIVTNISGISGMIKSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAAAATCCTGGAGATCCTTACTGCGCAAAAGGGGAAATCTACGGCTGAAACTCCTAAACTAGAAGATGTTGCACCTCCAGGTTTTACCCCATCAGTACCTCAGCA
TAGCGGGGCATCGGCTACATCTGTACAACCGATATTCTATACTCATGCACCTCAAATGCCTCCATTAGGAGGAGGGGCAGGACAGGGTCGCCAGGCGGTACAGGGGCAAA
TGAATTATTCATCAGATGCTCAAAATTCCAACTTGTCGGGTGCTCAACGAGTTTTTAGAAACAACTCAAGGAATTATGATCCCATCCCTGAAAATGAACCTGAAATTCAT
TTTGTAAACATGATCCTTGGAGAAGATACATCAGTAAAAGATTCGTGTAAGCCAGAACCCCTGATAATATTTTTTAAGGAACAACCTTCAGGTGTCCAAACTGATTTGAC
CATCTCACAACCATTAACTATCCAAATCCCTAGTTCTTACAAATATAAGGACAACAAAGCAGTACCATGGAATTATGGTTGTCATGGCCTCAATGAAGAAGCTGCTATCG
TCACCAACATTTCGGGAATCAGTGGTATGATAAAGAGTGGAAGAGCTTCAATGATGGTTGCAAAAACCATGATGAAAGAAGGATTTGAACCTGGTGAAGGCCTAGGAAAA
TATCAACAAGGGAGAAGACAACCAATATGTCTGCCCAAGGCTGTTGAAAAGTTCGGTTTAGGTTATAAGCCAACTGTTGTGGACTCGAAGAATGTCCAAGAAGAAAAAAG
AAAGCAAAGGAGCTCCAGATTAGAAAATCGAGAAGTAAGTACCAAGAGAATGATCATACCCCATCTCTATGAGACTTTCAAGAAGAGTAAAGTCAAAGCAGACAAGTTAG
TATTAGAGATGTCAGATTTATCCATCACTGCCATCATTGAAGAACATGTGGAATCTGTAGATTCCTTGGTATACAAGTGCCCTCCAGGTTTCGAACTATGCAATTGGGAA
TCCACAGAATTGCCTATTCATTTTGAAGAAGCCCAAGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCAAAAATCCTGGAGATCCTTACTGCGCAAAAGGGGAAATCTACGGCTGAAACTCCTAAACTAGAAGATGTTGCACCTCCAGGTTTTACCCCATCAGTACCTCAGCA
TAGCGGGGCATCGGCTACATCTGTACAACCGATATTCTATACTCATGCACCTCAAATGCCTCCATTAGGAGGAGGGGCAGGACAGGGTCGCCAGGCGGTACAGGGGCAAA
TGAATTATTCATCAGATGCTCAAAATTCCAACTTGTCGGGTGCTCAACGAGTTTTTAGAAACAACTCAAGGAATTATGATCCCATCCCTGAAAATGAACCTGAAATTCAT
TTTGTAAACATGATCCTTGGAGAAGATACATCAGTAAAAGATTCGTGTAAGCCAGAACCCCTGATAATATTTTTTAAGGAACAACCTTCAGGTGTCCAAACTGATTTGAC
CATCTCACAACCATTAACTATCCAAATCCCTAGTTCTTACAAATATAAGGACAACAAAGCAGTACCATGGAATTATGGTTGTCATGGCCTCAATGAAGAAGCTGCTATCG
TCACCAACATTTCGGGAATCAGTGGTATGATAAAGAGTGGAAGAGCTTCAATGATGGTTGCAAAAACCATGATGAAAGAAGGATTTGAACCTGGTGAAGGCCTAGGAAAA
TATCAACAAGGGAGAAGACAACCAATATGTCTGCCCAAGGCTGTTGAAAAGTTCGGTTTAGGTTATAAGCCAACTGTTGTGGACTCGAAGAATGTCCAAGAAGAAAAAAG
AAAGCAAAGGAGCTCCAGATTAGAAAATCGAGAAGTAAGTACCAAGAGAATGATCATACCCCATCTCTATGAGACTTTCAAGAAGAGTAAAGTCAAAGCAGACAAGTTAG
TATTAGAGATGTCAGATTTATCCATCACTGCCATCATTGAAGAACATGTGGAATCTGTAGATTCCTTGGTATACAAGTGCCCTCCAGGTTTCGAACTATGCAATTGGGAA
TCCACAGAATTGCCTATTCATTTTGAAGAAGCCCAAGAGTAA
Protein sequenceShow/hide protein sequence
MSKILEILTAQKGKSTAETPKLEDVAPPGFTPSVPQHSGASATSVQPIFYTHAPQMPPLGGGAGQGRQAVQGQMNYSSDAQNSNLSGAQRVFRNNSRNYDPIPENEPEIH
FVNMILGEDTSVKDSCKPEPLIIFFKEQPSGVQTDLTISQPLTIQIPSSYKYKDNKAVPWNYGCHGLNEEAAIVTNISGISGMIKSGRASMMVAKTMMKEGFEPGEGLGK
YQQGRRQPICLPKAVEKFGLGYKPTVVDSKNVQEEKRKQRSSRLENREVSTKRMIIPHLYETFKKSKVKADKLVLEMSDLSITAIIEEHVESVDSLVYKCPPGFELCNWE
STELPIHFEEAQE