; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg011410 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg011410
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationscaffold8:10153325..10154867
RNA-Seq ExpressionSpg011410
SyntenySpg011410
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY08849.1 Uncharacterized protein TCM_024087 [Theobroma cacao]2.4e-1438.52Show/hide
Query:  IADHGWELFCAKPESVNAQVVGEFYAN-IDKEDGFQGHSGSCPKTGKR---TFQSAYLKREANTWMGFIRQRVLPMTHDSTVSRERVLLTFAILRSLSID
        I D  W  FC +P++    VV EFYAN ++  DG     G+  KT      +F+ + +K+E   W+ F+  R+L  TH S V+++R +L +AI+   SID
Subjt:  IADHGWELFCAKPESVNAQVVGEFYAN-IDKEDGFQGHSGSCPKTGKR---TFQSAYLKREANTWMGFIRQRVLPMTHDSTVSRERVLLTFAILRSLSID

Query:  VGKMIVNEISGCWKKKVEKLFFPNTITMLCRRAGV
        VGK+I + I    + K + + FP+ IT LC RAGV
Subjt:  VGKMIVNEISGCWKKKVEKLFFPNTITMLCRRAGV

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]3.1e-1429.24Show/hide
Query:  LKRRAEKGKSVAEASEEPDEIEKHGRFINNFARAKYAELLKRDFLFERGF-------SGNLPHFLRTGIADHGWELFCAKPESVNAQVVGEFYAN-----
        +KR A K     +   E  E     R+ NN        +  R    E+GF        G LP F+   I  H W+ FCA PE     +V EFYAN     
Subjt:  LKRRAEKGKSVAEASEEPDEIEKHGRFINNFARAKYAELLKRDFLFERGF-------SGNLPHFLRTGIADHGWELFCAKPESVNAQVVGEFYAN-----

Query:  ---------------------------IDKEDGF------------------QGHSGSCPKTGKRTFQSAYLKREANTWMGFIRQRVLPMTHDSTVSRER
                                   +D+   F                   G   +    G  T   + L   A  W  F++  +LP TH  TVS++R
Subjt:  ---------------------------IDKEDGF------------------QGHSGSCPKTGKRTFQSAYLKREANTWMGFIRQRVLPMTHDSTVSRER

Query:  VLLTFAILRSLSIDVGKMIVNEISGCWKKKVEKLFFPNTITMLCRRAGVPVDEGGVILFDKGIIDTPNLARLQRTQE
        +LL  ++L   SI+VG+MI +EI  C  +K   LFFP+ IT LCR A  P       L + G ID   +AR+  TQE
Subjt:  VLLTFAILRSLSIDVGKMIVNEISGCWKKKVEKLFFPNTITMLCRRAGVPVDEGGVILFDKGIIDTPNLARLQRTQE

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]2.8e-1529.44Show/hide
Query:  RFINNFARAKYA-ELLKRDFLFERGF-------SGNLPHFLRTGIADHGWELFCAKPESVNAQVVGEFYAN-----------------------------
        +F    A  +Y   +  R    E+GF        G LP F+   I  H W+ FCA PE     +V EFYAN                             
Subjt:  RFINNFARAKYA-ELLKRDFLFERGF-------SGNLPHFLRTGIADHGWELFCAKPESVNAQVVGEFYAN-----------------------------

Query:  ---IDKEDGF------------------QGHSGSCPKTGKRTFQSAYLKREANTWMGFIRQRVLPMTHDSTVSRERVLLTFAILRSLSIDVGKMIVNEIS
           +D+   F                   G   +    G  T   + L   A  W  F++ R+LP TH  TVS++R+LL  ++L   SI+VG+MI +EI 
Subjt:  ---IDKEDGF------------------QGHSGSCPKTGKRTFQSAYLKREANTWMGFIRQRVLPMTHDSTVSRERVLLTFAILRSLSIDVGKMIVNEIS

Query:  GCWKKKVEKLFFPNTITMLCRRAGVPVDEGGVILFDKGIIDTPNLARL
         C  +K   LFFP+ IT LCR A  P       L + G ID   +AR+
Subjt:  GCWKKKVEKLFFPNTITMLCRRAGVPVDEGGVILFDKGIIDTPNLARL

TYG52543.1 hypothetical protein ES288_D09G036700v1 [Gossypium darwinii]1.1e-1632.79Show/hide
Query:  WELFCAKPESVNAQVVGEFYANIDKEDGFQ------------------------GHSGSCPKTGKRTFQSAYLKREANTWMGFIRQRVLPMTHDSTVSRE
        WE FC      + ++V EFYA++  +D  +                        G        G  + Q  YLK  A  W  F+R   +P++H ST+S E
Subjt:  WELFCAKPESVNAQVVGEFYANIDKEDGFQ------------------------GHSGSCPKTGKRTFQSAYLKREANTWMGFIRQRVLPMTHDSTVSRE

Query:  RVLLTFAILRSLSIDVGKMIVNEISGCWKKKVEKLFFPNTITMLCRRAGVPVDEGGVILFDKGIIDTPNLARL-QRTQEARQG
         +LL +AIL   SI+VGK+I+ EI  C KKK    +FP+ IT LC +A V +       + +G I   +L RL +R  E  QG
Subjt:  RVLLTFAILRSLSIDVGKMIVNEISGCWKKKVEKLFFPNTITMLCRRAGVPVDEGGVILFDKGIIDTPNLARL-QRTQEARQG

TYH91214.1 hypothetical protein ES332_A13G101600v1 [Gossypium tomentosum]4.1e-1427.45Show/hide
Query:  RDFLFERGFSGNLPHFLRTGIADHGWELFCAKPESVNAQVVGEFYANID------------------------------KEDGFQG--------------
        + F+F    +  +P ++R  I +  W+  C   +S + +VV EFYAN+                               ++DG+                
Subjt:  RDFLFERGFSGNLPHFLRTGIADHGWELFCAKPESVNAQVVGEFYANID------------------------------KEDGFQG--------------

Query:  HSGSCPKT-------GKRTFQSAYLKREANTWMGFIRQRVLPMTHDSTVSRERVLLTFAILRSLSIDVGKMIVNEISGCWKKKVEKLFFPNTITMLCRRA
        H+ + PKT       G  + Q  +L   A  W  F+R  ++P +H ST+S E + L +AIL   SI++ K+IV EI  C  K+V   FFP+ IT LC++ 
Subjt:  HSGSCPKT-------GKRTFQSAYLKREANTWMGFIRQRVLPMTHDSTVSRERVLLTFAILRSLSIDVGKMIVNEISGCWKKKVEKLFFPNTITMLCRRA

Query:  GVPV
         +P+
Subjt:  GVPV

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAAACAAGAGCGAGGAAAGAAAGAGAGAATGAGGAGGAAGAGGTACCTGTTAGCCCTGAGGTGCAGAAGGTAAAGGCGAAGAAGAAAAAAACACCAGAGGAGAA
AGAAGCCAAGAGACGAAGACGACAACAGAGGGCTGAGGAACAAGAAAAGGCAACAGAGGTTGTTGCTGCCACAGTTGAAGAAGGAGACCTGCAAGAACCTGATGTACAGA
ACCCAGAACAGACTGAGCAGAGGGTCGCGGATACAGAAGACGTTCAAGAGGAGCAAACAGAGGAAGTTCGAGAGGAAAATACAGAGGAAGTTCGAGAAGAAATTACAAAG
GAAGTTCAAGAAAAGCAGGCCGAGGATGTACAAATGCAACAGGCAGAAGATGTTCAGGTAACGGATAATGAGCCAGTGCAGGAGGCTCAAGTGGAGGTGATCATGCCAGA
AGTACCAAAACGTCGCCTCGTTAAGGGGAAAGCAGGTCGCGCTAGGGTTGTCCGAACTAATACTCCTTCGCCTCCAACCACTGATTCTGAAAGAGAAAATGCAGGAAGAG
AGGAACGAGAAAAAAAGGAAGTCGAAGAAAGAGCAAGAGAAGAGGCAGAGAAAAAGGCTGAGGAAGAGCGGTTGCTCAAGCGAAGGGCGGAAAAGGGCAAAAGTGTTGCT
GAAGCATCGGAGGAACCTGATGAAATAGAAAAACATGGTCGCTTTATCAACAATTTTGCCAGAGCAAAATACGCTGAGCTGCTGAAAAGGGACTTCCTGTTTGAAAGAGG
ATTTAGCGGTAATCTTCCGCATTTTTTGAGGACCGGCATTGCAGACCATGGCTGGGAGTTGTTTTGTGCGAAGCCTGAGTCTGTAAACGCACAGGTGGTGGGTGAATTTT
ATGCTAATATTGATAAAGAGGATGGTTTCCAGGGGCACAGTGGCAGCTGTCCAAAGACAGGGAAAAGGACATTTCAGTCAGCTTATCTGAAGAGGGAAGCGAACACGTGG
ATGGGATTTATCAGACAGAGGGTGCTTCCAATGACTCATGACTCGACGGTCTCGAGGGAACGGGTTCTTCTGACTTTCGCGATTTTGCGATCTCTTAGCATTGATGTAGG
GAAGATGATTGTTAATGAGATTTCTGGTTGTTGGAAAAAGAAAGTGGAGAAATTGTTCTTTCCGAACACAATCACGATGCTTTGTAGAAGAGCAGGGGTTCCAGTGGATG
AGGGAGGTGTTATCCTGTTTGACAAGGGAATTATAGATACGCCTAACTTGGCGCGGCTTCAGCGTACGCAGGAGGCACGTCAAGGTGGGCTTATCTACGGCATCAACACG
GTTTTAGAACAACTGGCACTTTCAGCCAGCAGGCAAGAGTTTGCCGAGAGGCAAGCTTTAACCTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAAACAAGAGCGAGGAAAGAAAGAGAGAATGAGGAGGAAGAGGTACCTGTTAGCCCTGAGGTGCAGAAGGTAAAGGCGAAGAAGAAAAAAACACCAGAGGAGAA
AGAAGCCAAGAGACGAAGACGACAACAGAGGGCTGAGGAACAAGAAAAGGCAACAGAGGTTGTTGCTGCCACAGTTGAAGAAGGAGACCTGCAAGAACCTGATGTACAGA
ACCCAGAACAGACTGAGCAGAGGGTCGCGGATACAGAAGACGTTCAAGAGGAGCAAACAGAGGAAGTTCGAGAGGAAAATACAGAGGAAGTTCGAGAAGAAATTACAAAG
GAAGTTCAAGAAAAGCAGGCCGAGGATGTACAAATGCAACAGGCAGAAGATGTTCAGGTAACGGATAATGAGCCAGTGCAGGAGGCTCAAGTGGAGGTGATCATGCCAGA
AGTACCAAAACGTCGCCTCGTTAAGGGGAAAGCAGGTCGCGCTAGGGTTGTCCGAACTAATACTCCTTCGCCTCCAACCACTGATTCTGAAAGAGAAAATGCAGGAAGAG
AGGAACGAGAAAAAAAGGAAGTCGAAGAAAGAGCAAGAGAAGAGGCAGAGAAAAAGGCTGAGGAAGAGCGGTTGCTCAAGCGAAGGGCGGAAAAGGGCAAAAGTGTTGCT
GAAGCATCGGAGGAACCTGATGAAATAGAAAAACATGGTCGCTTTATCAACAATTTTGCCAGAGCAAAATACGCTGAGCTGCTGAAAAGGGACTTCCTGTTTGAAAGAGG
ATTTAGCGGTAATCTTCCGCATTTTTTGAGGACCGGCATTGCAGACCATGGCTGGGAGTTGTTTTGTGCGAAGCCTGAGTCTGTAAACGCACAGGTGGTGGGTGAATTTT
ATGCTAATATTGATAAAGAGGATGGTTTCCAGGGGCACAGTGGCAGCTGTCCAAAGACAGGGAAAAGGACATTTCAGTCAGCTTATCTGAAGAGGGAAGCGAACACGTGG
ATGGGATTTATCAGACAGAGGGTGCTTCCAATGACTCATGACTCGACGGTCTCGAGGGAACGGGTTCTTCTGACTTTCGCGATTTTGCGATCTCTTAGCATTGATGTAGG
GAAGATGATTGTTAATGAGATTTCTGGTTGTTGGAAAAAGAAAGTGGAGAAATTGTTCTTTCCGAACACAATCACGATGCTTTGTAGAAGAGCAGGGGTTCCAGTGGATG
AGGGAGGTGTTATCCTGTTTGACAAGGGAATTATAGATACGCCTAACTTGGCGCGGCTTCAGCGTACGCAGGAGGCACGTCAAGGTGGGCTTATCTACGGCATCAACACG
GTTTTAGAACAACTGGCACTTTCAGCCAGCAGGCAAGAGTTTGCCGAGAGGCAAGCTTTAACCTTCTAG
Protein sequenceShow/hide protein sequence
MAKTRARKERENEEEEVPVSPEVQKVKAKKKKTPEEKEAKRRRRQQRAEEQEKATEVVAATVEEGDLQEPDVQNPEQTEQRVADTEDVQEEQTEEVREENTEEVREEITK
EVQEKQAEDVQMQQAEDVQVTDNEPVQEAQVEVIMPEVPKRRLVKGKAGRARVVRTNTPSPPTTDSERENAGREEREKKEVEERAREEAEKKAEEERLLKRRAEKGKSVA
EASEEPDEIEKHGRFINNFARAKYAELLKRDFLFERGFSGNLPHFLRTGIADHGWELFCAKPESVNAQVVGEFYANIDKEDGFQGHSGSCPKTGKRTFQSAYLKREANTW
MGFIRQRVLPMTHDSTVSRERVLLTFAILRSLSIDVGKMIVNEISGCWKKKVEKLFFPNTITMLCRRAGVPVDEGGVILFDKGIIDTPNLARLQRTQEARQGGLIYGINT
VLEQLALSASRQEFAERQALTF