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Spg011416 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg011416
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 2-like
Genome locationscaffold8:11925226..11929390
RNA-Seq ExpressionSpg011416
SyntenySpg011416
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037431.1 uncharacterized protein E6C27_scaffold277G00140 [Cucumis melo var. makuwa]1.3e-0841.86Show/hide
Query:  AVKSNSKQIVVRCKEP-FSVGMLDVPAFGMVTAFIVCEIVKSMINSNDKTKCRPHDIILYMRMKHEVNISYDKAWRARDLALKSIR
        AV ++ + + VR     F     D P     T++IV E  KS    ND   CRP ++I YM++ H VN+SYDKAWR R++AL  IR
Subjt:  AVKSNSKQIVVRCKEP-FSVGMLDVPAFGMVTAFIVCEIVKSMINSNDKTKCRPHDIILYMRMKHEVNISYDKAWRARDLALKSIR

KAA0061274.1 uncharacterized protein E6C27_scaffold455G001170 [Cucumis melo var. makuwa]4.6e-0937.27Show/hide
Query:  VKSNSKQIVVRCKEPFSVGMLDVPAF--------------------------GMVTAFIVCEIVKSMINSNDKTKCRPHDIILYMRMKHEVNISYDKAWR
        V+SN     +RCK+P  +  L    F                             T++IV E  K +   NDK  CRP D+I YM++ H VNISYDKAWR
Subjt:  VKSNSKQIVVRCKEPFSVGMLDVPAF--------------------------GMVTAFIVCEIVKSMINSNDKTKCRPHDIILYMRMKHEVNISYDKAWR

Query:  ARDLALKSIR
         R++AL SIR
Subjt:  ARDLALKSIR

KAA0067291.1 protein FAR1-RELATED SEQUENCE 2-like [Cucumis melo var. makuwa]1.0e-0834.65Show/hide
Query:  VKSNSKQIVVRCKEPFSVGMLDVPA--------FGMVTAFIVCEIVKSMINSNDKTKCRPHDIILYMRMKHEVNISYDKAWRARDLALKSIRVMSTQKRT
        V+SN     + CK+P     L                T++IV E  K     NDK  C P ++I YM++ HEVN+SYDKAWR R++AL SIR +      
Subjt:  VKSNSKQIVVRCKEPFSVGMLDVPA--------FGMVTAFIVCEIVKSMINSNDKTKCRPHDIILYMRMKHEVNISYDKAWRARDLALKSIRVMSTQKRT

Query:  L--RIGHHIDRNMPPLFFGSISNPEEY
        +       + RN P    G+ +  EEY
Subjt:  L--RIGHHIDRNMPPLFFGSISNPEEY

TYK29863.1 MuDRA-like transposase [Cucumis melo var. makuwa]6.0e-0937.27Show/hide
Query:  VKSNSKQIVVRCKEPFSVGMLDVPAF--------------------------GMVTAFIVCEIVKSMINSNDKTKCRPHDIILYMRMKHEVNISYDKAWR
        V+SN     +RCK+P     L    F                             T++IV E  K +  +NDK  CRP D+I YM++ H VNISYDKAWR
Subjt:  VKSNSKQIVVRCKEPFSVGMLDVPAF--------------------------GMVTAFIVCEIVKSMINSNDKTKCRPHDIILYMRMKHEVNISYDKAWR

Query:  ARDLALKSIR
         R++AL SIR
Subjt:  ARDLALKSIR

XP_016901440.1 PREDICTED: uncharacterized protein LOC107991253 [Cucumis melo]7.9e-0956.36Show/hide
Query:  TAFIVCEIVKSMINSNDKTKCRPHDIILYMRMKHEVNISYDKAWRARDLALKSIR
        T++IV E    +   NDKT CRP D+I YM++ H+VN+SYDKAWR R++AL SIR
Subjt:  TAFIVCEIVKSMINSNDKTKCRPHDIILYMRMKHEVNISYDKAWRARDLALKSIR

TrEMBL top hitse value%identityAlignment
A0A1S4E0D5 uncharacterized protein LOC1079912533.8e-0956.36Show/hide
Query:  TAFIVCEIVKSMINSNDKTKCRPHDIILYMRMKHEVNISYDKAWRARDLALKSIR
        T++IV E    +   NDKT CRP D+I YM++ H+VN+SYDKAWR R++AL SIR
Subjt:  TAFIVCEIVKSMINSNDKTKCRPHDIILYMRMKHEVNISYDKAWRARDLALKSIR

A0A5A7V1Z6 CCHC-type domain-containing protein2.2e-0937.27Show/hide
Query:  VKSNSKQIVVRCKEPFSVGMLDVPAF--------------------------GMVTAFIVCEIVKSMINSNDKTKCRPHDIILYMRMKHEVNISYDKAWR
        V+SN     +RCK+P  +  L    F                             T++IV E  K +   NDK  CRP D+I YM++ H VNISYDKAWR
Subjt:  VKSNSKQIVVRCKEPFSVGMLDVPAF--------------------------GMVTAFIVCEIVKSMINSNDKTKCRPHDIILYMRMKHEVNISYDKAWR

Query:  ARDLALKSIR
         R++AL SIR
Subjt:  ARDLALKSIR

A0A5A7VNV1 Protein FAR1-RELATED SEQUENCE 2-like5.0e-0934.65Show/hide
Query:  VKSNSKQIVVRCKEPFSVGMLDVPA--------FGMVTAFIVCEIVKSMINSNDKTKCRPHDIILYMRMKHEVNISYDKAWRARDLALKSIRVMSTQKRT
        V+SN     + CK+P     L                T++IV E  K     NDK  C P ++I YM++ HEVN+SYDKAWR R++AL SIR +      
Subjt:  VKSNSKQIVVRCKEPFSVGMLDVPA--------FGMVTAFIVCEIVKSMINSNDKTKCRPHDIILYMRMKHEVNISYDKAWRARDLALKSIRVMSTQKRT

Query:  L--RIGHHIDRNMPPLFFGSISNPEEY
        +       + RN P    G+ +  EEY
Subjt:  L--RIGHHIDRNMPPLFFGSISNPEEY

A0A5D3BLS3 Uncharacterized protein6.5e-0941.86Show/hide
Query:  AVKSNSKQIVVRCKEP-FSVGMLDVPAFGMVTAFIVCEIVKSMINSNDKTKCRPHDIILYMRMKHEVNISYDKAWRARDLALKSIR
        AV ++ + + VR     F     D P     T++IV E  KS    ND   CRP ++I YM++ H VN+SYDKAWR R++AL  IR
Subjt:  AVKSNSKQIVVRCKEP-FSVGMLDVPAFGMVTAFIVCEIVKSMINSNDKTKCRPHDIILYMRMKHEVNISYDKAWRARDLALKSIR

A0A5D3E198 MuDRA-like transposase2.9e-0937.27Show/hide
Query:  VKSNSKQIVVRCKEPFSVGMLDVPAF--------------------------GMVTAFIVCEIVKSMINSNDKTKCRPHDIILYMRMKHEVNISYDKAWR
        V+SN     +RCK+P     L    F                             T++IV E  K +  +NDK  CRP D+I YM++ H VNISYDKAWR
Subjt:  VKSNSKQIVVRCKEPFSVGMLDVPAF--------------------------GMVTAFIVCEIVKSMINSNDKTKCRPHDIILYMRMKHEVNISYDKAWR

Query:  ARDLALKSIR
         R++AL SIR
Subjt:  ARDLALKSIR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCTGTGAAGTCAAATAGCAAACAAATAGTGGTTAGGTGCAAGGAACCATTTTCTGTTGGTATGTTAGATGTTCCCGCTTTCGGAATGGTCACTGCTTTCATTGTATGTGA
GATTGTTAAGTCCATGATTAACTCAAATGACAAGACAAAGTGTCGTCCTCATGACATTATCCTCTATATGAGAATGAAGCATGAAGTTAACATTAGTTATGATAAAGCTT
GGAGGGCTCGTGATCTTGCCTTGAAATCTATTAGGGTCATGTCTACACAAAAAAGAACTTTAAGAATTGGTCATCATATTGATCGAAACATGCCTCCATTGTTCTTTGGG
AGTATTTCAAATCCAGAGGAGTACCTTGTTTGGGAGGAGGAAATCGATGCCATATTTGGTCACCACCACTATAGTGAAAAGGGAAAGCATGTTGATAAGGTGCAAAGTAG
TAAAGAGAAGCTTGTTAATGTTGTACCTATCCATGATAATGATATTTTGCCTAGTAGGTCATTAGATAACAAGGAATCACATGATTGTAATCTTACTACTACTGTTGTAC
TACTTACTAGAGAAGCATATATTGATAGTAGTGGAGTAGAGAAAAAAGATGGTAGTAAGCTTGAAACTAGGATACTTTGTAATGACCTTATTAATATATTAGATCACAAA
GTAACATGTGATCCTACTCTTGTATCATTTCTTCCAAGAGAAGTAAAACTTGATGTGTGTGAGTTGGAAAACAAAAGGCATGAGATCGAGGAAAAAGAAATAGAAATATA
TGAAGAAAAAAAGTGTGAAAACGCGAATGAGAGAGAAAAGCAAGTGAGTAGTACTCAATCTAGAAATCAAAATGAGAGAAAAGCCAAGAATATGCCCTTGAAAACTTGCG
AGGACAAATCTTTCTTGATTTCAAAACAAAACATTCTTGAACTTTTTGATAAAAGAGATTGTTTTCTAACAGGTGAGCTTCAACCAAGTTTGCCTAGTTTTTCTTTTGAG
TTTTTACAGGTTGTTAAAGCACTGATTATGAAGAAAAACTCAAAGATTGGTTCTTTCGATGGTTGCAAGCTATATGTGAATTGGAAGCACCATCATTCTTTCCAAAAGAG
ATGGAATCCAAAAAGAATCAAGCCTTTGACATCTCATGACTACCAGGTTGCTTTACAAGGGAGACCATCCAAGAGAAACCCAAAAGTCACCTTGTTTTCTTCTCATGACT
TTAAAACCGCTTTACAAGGCAATGATTAA
mRNA sequenceShow/hide mRNA sequence
GCTGTGAAGTCAAATAGCAAACAAATAGTGGTTAGGTGCAAGGAACCATTTTCTGTTGGTATGTTAGATGTTCCCGCTTTCGGAATGGTCACTGCTTTCATTGTATGTGA
GATTGTTAAGTCCATGATTAACTCAAATGACAAGACAAAGTGTCGTCCTCATGACATTATCCTCTATATGAGAATGAAGCATGAAGTTAACATTAGTTATGATAAAGCTT
GGAGGGCTCGTGATCTTGCCTTGAAATCTATTAGGGTCATGTCTACACAAAAAAGAACTTTAAGAATTGGTCATCATATTGATCGAAACATGCCTCCATTGTTCTTTGGG
AGTATTTCAAATCCAGAGGAGTACCTTGTTTGGGAGGAGGAAATCGATGCCATATTTGGTCACCACCACTATAGTGAAAAGGGAAAGCATGTTGATAAGGTGCAAAGTAG
TAAAGAGAAGCTTGTTAATGTTGTACCTATCCATGATAATGATATTTTGCCTAGTAGGTCATTAGATAACAAGGAATCACATGATTGTAATCTTACTACTACTGTTGTAC
TACTTACTAGAGAAGCATATATTGATAGTAGTGGAGTAGAGAAAAAAGATGGTAGTAAGCTTGAAACTAGGATACTTTGTAATGACCTTATTAATATATTAGATCACAAA
GTAACATGTGATCCTACTCTTGTATCATTTCTTCCAAGAGAAGTAAAACTTGATGTGTGTGAGTTGGAAAACAAAAGGCATGAGATCGAGGAAAAAGAAATAGAAATATA
TGAAGAAAAAAAGTGTGAAAACGCGAATGAGAGAGAAAAGCAAGTGAGTAGTACTCAATCTAGAAATCAAAATGAGAGAAAAGCCAAGAATATGCCCTTGAAAACTTGCG
AGGACAAATCTTTCTTGATTTCAAAACAAAACATTCTTGAACTTTTTGATAAAAGAGATTGTTTTCTAACAGGTGAGCTTCAACCAAGTTTGCCTAGTTTTTCTTTTGAG
TTTTTACAGGTTGTTAAAGCACTGATTATGAAGAAAAACTCAAAGATTGGTTCTTTCGATGGTTGCAAGCTATATGTGAATTGGAAGCACCATCATTCTTTCCAAAAGAG
ATGGAATCCAAAAAGAATCAAGCCTTTGACATCTCATGACTACCAGGTTGCTTTACAAGGGAGACCATCCAAGAGAAACCCAAAAGTCACCTTGTTTTCTTCTCATGACT
TTAAAACCGCTTTACAAGGCAATGATTAA
Protein sequenceShow/hide protein sequence
AVKSNSKQIVVRCKEPFSVGMLDVPAFGMVTAFIVCEIVKSMINSNDKTKCRPHDIILYMRMKHEVNISYDKAWRARDLALKSIRVMSTQKRTLRIGHHIDRNMPPLFFG
SISNPEEYLVWEEEIDAIFGHHHYSEKGKHVDKVQSSKEKLVNVVPIHDNDILPSRSLDNKESHDCNLTTTVVLLTREAYIDSSGVEKKDGSKLETRILCNDLINILDHK
VTCDPTLVSFLPREVKLDVCELENKRHEIEEKEIEIYEEKKCENANEREKQVSSTQSRNQNERKAKNMPLKTCEDKSFLISKQNILELFDKRDCFLTGELQPSLPSFSFE
FLQVVKALIMKKNSKIGSFDGCKLYVNWKHHHSFQKRWNPKRIKPLTSHDYQVALQGRPSKRNPKVTLFSSHDFKTALQGND