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Spg011433 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg011433
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPolynucleotidyl transferase, ribonuclease H-like superfamily protein
Genome locationscaffold8:16325649..16329661
RNA-Seq ExpressionSpg011433
SyntenySpg011433
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143317.1 uncharacterized protein LOC111013216 [Momordica charantia]1.6e-0438.64Show/hide
Query:  QSSGDFPQGGKG----KVVWYRPQPLEGSQWKLNMDVAWFKASNTGGVGWIIRDSVDSLVGAGCKKISRKAEIKMLETLAIIHGLQHL
        Q+ G  P+G +      V W  P     + WKLN D +W +    GG+GWI+ D    +V AG  KI  K EI  LE + II GLQ +
Subjt:  QSSGDFPQGGKG----KVVWYRPQPLEGSQWKLNMDVAWFKASNTGGVGWIIRDSVDSLVGAGCKKISRKAEIKMLETLAIIHGLQHL
XP_022143535.1 uncharacterized protein LOC111013412 [Momordica charantia]1.4e-0541.27Show/hide
Query:  QPLEGSQWKLNMDVAWFKASNTGGVGWIIRDSVDSLVGAGCKKISRKAEIKMLETLAIIHGLQ
        +P   + WKLN + AW   +NTGG+GWI+RD    ++ A C+ I  +  I  LE +AI  GL+
Subjt:  QPLEGSQWKLNMDVAWFKASNTGGVGWIIRDSVDSLVGAGCKKISRKAEIKMLETLAIIHGLQ
XP_022154990.1 uncharacterized protein LOC111022134 isoform X1 [Momordica charantia]1.1e-0541.54Show/hide
Query:  RPQPLEGSQWKLNMDVAWFKASNTGGVGWIIRDSVDSLVGAGCKKISRKAEIKMLETLAIIHGLQ
        R +P   + WKLN D AW   +NT G+GWI+RD    ++  GC+ I  +  I  LE +AI  GL+
Subjt:  RPQPLEGSQWKLNMDVAWFKASNTGGVGWIIRDSVDSLVGAGCKKISRKAEIKMLETLAIIHGLQ
XP_022154991.1 uncharacterized protein LOC111022134 isoform X2 [Momordica charantia]1.1e-0541.54Show/hide
Query:  RPQPLEGSQWKLNMDVAWFKASNTGGVGWIIRDSVDSLVGAGCKKISRKAEIKMLETLAIIHGLQ
        R +P   + WKLN D AW   +NT G+GWI+RD    ++  GC+ I  +  I  LE +AI  GL+
Subjt:  RPQPLEGSQWKLNMDVAWFKASNTGGVGWIIRDSVDSLVGAGCKKISRKAEIKMLETLAIIHGLQ
XP_022156777.1 uncharacterized protein LOC111023608 [Momordica charantia]3.7e-0643.08Show/hide
Query:  RPQPLEGSQWKLNMDVAWFKASNTGGVGWIIRDSVDSLVGAGCKKISRKAEIKMLETLAIIHGLQ
        R +P   + WKLN D AW   +NTGG+GWI+RD    ++ A C+ I  +  I  LE +AI  GL+
Subjt:  RPQPLEGSQWKLNMDVAWFKASNTGGVGWIIRDSVDSLVGAGCKKISRKAEIKMLETLAIIHGLQ
TrEMBL top hitse value%identityAlignment
A0A6J1CP26 uncharacterized protein LOC1110134126.9e-0641.27Show/hide
Query:  QPLEGSQWKLNMDVAWFKASNTGGVGWIIRDSVDSLVGAGCKKISRKAEIKMLETLAIIHGLQ
        +P   + WKLN + AW   +NTGG+GWI+RD    ++ A C+ I  +  I  LE +AI  GL+
Subjt:  QPLEGSQWKLNMDVAWFKASNTGGVGWIIRDSVDSLVGAGCKKISRKAEIKMLETLAIIHGLQ
A0A6J1CQG0 uncharacterized protein LOC1110132167.6e-0538.64Show/hide
Query:  QSSGDFPQGGKG----KVVWYRPQPLEGSQWKLNMDVAWFKASNTGGVGWIIRDSVDSLVGAGCKKISRKAEIKMLETLAIIHGLQHL
        Q+ G  P+G +      V W  P     + WKLN D +W +    GG+GWI+ D    +V AG  KI  K EI  LE + II GLQ +
Subjt:  QSSGDFPQGGKG----KVVWYRPQPLEGSQWKLNMDVAWFKASNTGGVGWIIRDSVDSLVGAGCKKISRKAEIKMLETLAIIHGLQHL
A0A6J1DL64 uncharacterized protein LOC111022134 isoform X15.3e-0641.54Show/hide
Query:  RPQPLEGSQWKLNMDVAWFKASNTGGVGWIIRDSVDSLVGAGCKKISRKAEIKMLETLAIIHGLQ
        R +P   + WKLN D AW   +NT G+GWI+RD    ++  GC+ I  +  I  LE +AI  GL+
Subjt:  RPQPLEGSQWKLNMDVAWFKASNTGGVGWIIRDSVDSLVGAGCKKISRKAEIKMLETLAIIHGLQ
A0A6J1DQC9 uncharacterized protein LOC111022134 isoform X25.3e-0641.54Show/hide
Query:  RPQPLEGSQWKLNMDVAWFKASNTGGVGWIIRDSVDSLVGAGCKKISRKAEIKMLETLAIIHGLQ
        R +P   + WKLN D AW   +NT G+GWI+RD    ++  GC+ I  +  I  LE +AI  GL+
Subjt:  RPQPLEGSQWKLNMDVAWFKASNTGGVGWIIRDSVDSLVGAGCKKISRKAEIKMLETLAIIHGLQ
A0A6J1DSV1 uncharacterized protein LOC1110236081.8e-0643.08Show/hide
Query:  RPQPLEGSQWKLNMDVAWFKASNTGGVGWIIRDSVDSLVGAGCKKISRKAEIKMLETLAIIHGLQ
        R +P   + WKLN D AW   +NTGG+GWI+RD    ++ A C+ I  +  I  LE +AI  GL+
Subjt:  RPQPLEGSQWKLNMDVAWFKASNTGGVGWIIRDSVDSLVGAGCKKISRKAEIKMLETLAIIHGLQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G23320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein8.3e-0431.03Show/hide
Query:  WYRPQPLEGSQW-KLNMDVAWFKASNTGGVGWIIRDSVDSLVGAGCKKISRKAEIKMLETLAIIHGLQHLIDKRIAYPELIGHKLVV
        W +P    G++W K N DV+        G+ WIIR+S  + +  GC K   +  IK  E  A+I  +Q   D      E  G  + V
Subjt:  WYRPQPLEGSQW-KLNMDVAWFKASNTGGVGWIIRDSVDSLVGAGCKKISRKAEIKMLETLAIIHGLQHLIDKRIAYPELIGHKLVV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACAAATCGCACGCAAGGGAGAGGTTTTGGTTTATGGGCCTGCTAAAAATGTACACGAACAACTAACGAGGAAGGCTACACGTGGGTTTTGCGTGCAACACCGTCG
AGGGGACATCGGGACGCGCCGTTCGTGGGCCTGGTATGGGGGATGGTGCGTAGGTTGTTGCAACGTCGTCACATCGCTGTCGAAGTTCTTGTTGTTGCCTCATGAGAAGC
GTTGTTGGACTTGCCGGAGAAGACTTGTTGAACGAAGAAGGAAAACCGATAACGACAAAGACCACTCATGCAGGAGAAGGGAAGAGAGCGTCGGCGAGTCTGCTGCCCAG
ACCAAACACGACGCGAGGGAGAGGCTGAAAATCCCGCTGCGTGGGTCTGCTGGTCGAAGAAGAAGAAAACACAGGGAAGGGGGAGAGGGATCTCAGAGCAGTGGAGACTT
TCCTCAAGGTGGGAAGGGAAAAGTGGTGTGGTACCGCCCTCAGCCGCTTGAAGGATCGCAATGGAAGTTGAACATGGACGTTGCTTGGTTCAAAGCTTCAAACACTGGTG
GTGTGGGCTGGATAATCCGCGACTCAGTTGATTCTTTGGTTGGAGCGGGATGCAAAAAAATCAGCAGAAAAGCAGAGATTAAAATGTTAGAAACTTTGGCTATTATCCAT
GGTCTTCAGCATCTTATTGATAAACGCATAGCTTACCCGGAGCTAATCGGCCACAAGTTGGTGGTTGAATCAGATGCCGCTGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCACAAATCGCACGCAAGGGAGAGGTTTTGGTTTATGGGCCTGCTAAAAATGTACACGAACAACTAACGAGGAAGGCTACACGTGGGTTTTGCGTGCAACACCGTCG
AGGGGACATCGGGACGCGCCGTTCGTGGGCCTGGTATGGGGGATGGTGCGTAGGTTGTTGCAACGTCGTCACATCGCTGTCGAAGTTCTTGTTGTTGCCTCATGAGAAGC
GTTGTTGGACTTGCCGGAGAAGACTTGTTGAACGAAGAAGGAAAACCGATAACGACAAAGACCACTCATGCAGGAGAAGGGAAGAGAGCGTCGGCGAGTCTGCTGCCCAG
ACCAAACACGACGCGAGGGAGAGGCTGAAAATCCCGCTGCGTGGGTCTGCTGGTCGAAGAAGAAGAAAACACAGGGAAGGGGGAGAGGGATCTCAGAGCAGTGGAGACTT
TCCTCAAGGTGGGAAGGGAAAAGTGGTGTGGTACCGCCCTCAGCCGCTTGAAGGATCGCAATGGAAGTTGAACATGGACGTTGCTTGGTTCAAAGCTTCAAACACTGGTG
GTGTGGGCTGGATAATCCGCGACTCAGTTGATTCTTTGGTTGGAGCGGGATGCAAAAAAATCAGCAGAAAAGCAGAGATTAAAATGTTAGAAACTTTGGCTATTATCCAT
GGTCTTCAGCATCTTATTGATAAACGCATAGCTTACCCGGAGCTAATCGGCCACAAGTTGGTGGTTGAATCAGATGCCGCTGTGTGA
Protein sequenceShow/hide protein sequence
MAQIARKGEVLVYGPAKNVHEQLTRKATRGFCVQHRRGDIGTRRSWAWYGGWCVGCCNVVTSLSKFLLLPHEKRCWTCRRRLVERRRKTDNDKDHSCRRREESVGESAAQ
TKHDARERLKIPLRGSAGRRRRKHREGGEGSQSSGDFPQGGKGKVVWYRPQPLEGSQWKLNMDVAWFKASNTGGVGWIIRDSVDSLVGAGCKKISRKAEIKMLETLAIIH
GLQHLIDKRIAYPELIGHKLVVESDAAV