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Spg011470 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg011470
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPMD domain-containing protein
Genome locationscaffold8:15170389..15174584
RNA-Seq ExpressionSpg011470
SyntenySpg011470
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033822.1 uncharacterized protein E6C27_scaffold1735G00180 [Cucumis melo var. makuwa]4.1e-2443.97Show/hide
Query:  SHLTEKLLSHLEDRDQPVENGVILHVGEAVHGNFRTLQPSLDSSRVLSRWSEGRPLNQESSLKVWFLESPIHNKASSQNPELTLGRQII-EGKACWSSSF
        S  T++ L  L+D +Q +++G++L V E    N    Q   ++  +L +WS+ + +N  S L  WFLES IHNK  ++NPE TL R++I + K  W +  
Subjt:  SHLTEKLLSHLEDRDQPVENGVILHVGEAVHGNFRTLQPSLDSSRVLSRWSEGRPLNQESSLKVWFLESPIHNKASSQNPELTLGRQII-EGKACWSSSF

Query:  KIHGEFSYTRHYWECLEIVVARNEPALTKARLFDAVMASFW
        K+HGEF Y  HYWE LE+ VARN   L +A LFDAVMAS +
Subjt:  KIHGEFSYTRHYWECLEIVVARNEPALTKARLFDAVMASFW

KAA0042070.1 hypothetical protein E6C27_scaffold67G005320 [Cucumis melo var. makuwa]8.3e-2534.16Show/hide
Query:  HLTEKLLS---HL---EDRDQPVENGVILHVGEAVHGNFRTLQPSLDSSRVLSRWSEGRPLNQESSLKVWFLESPIHNKASSQNPELTLGRQIIEGKACW
        + TE+ LS   HL    DR+QP E+ +  HV +   G+F    P LD++ +L R S   PL+       W L+S IHN+A + +  LTLG+ +IEG+  W
Subjt:  HLTEKLLS---HL---EDRDQPVENGVILHVGEAVHGNFRTLQPSLDSSRVLSRWSEGRPLNQESSLKVWFLESPIHNKASSQNPELTLGRQIIEGKACW

Query:  SSSFKIHGEFSYTRHYWECLEIVVARNEPALTKARLFDAVMASF------------------------------------------------------WI
         +  K+ GEF +T  YWE LE+VV RN   L  ARL+  V AS                                                       WI
Subjt:  SSSFKIHGEFSYTRHYWECLEIVVARNEPALTKARLFDAVMASF------------------------------------------------------WI

Query:  SFWFKRDLKYKKPPARKAKKASRPRSTHNPDGVPIKCLDWSKR
        SFW+     Y KP  RK KK SR +ST NPDG+ I+  DW+ R
Subjt:  SFWFKRDLKYKKPPARKAKKASRPRSTHNPDGVPIKCLDWSKR

KAA0050733.1 uncharacterized protein E6C27_scaffold560G00370 [Cucumis melo var. makuwa]7.0e-2443.97Show/hide
Query:  SHLTEKLLSHLEDRDQPVENGVILHVGEAVHGNFRTLQPSLDSSRVLSRWSEGRPLNQESSLKVWFLESPIHNKASSQNPELTLGRQII-EGKACWSSSF
        S  T++ L  L+D +Q +++G++L V +    N    Q   ++  +L +WS+ + +N  S L  WFLES IHNK  ++NPE TLG Q+I + K  W +  
Subjt:  SHLTEKLLSHLEDRDQPVENGVILHVGEAVHGNFRTLQPSLDSSRVLSRWSEGRPLNQESSLKVWFLESPIHNKASSQNPELTLGRQII-EGKACWSSSF

Query:  KIHGEFSYTRHYWECLEIVVARNEPALTKARLFDAVMASFW
        K+HGEF Y  HYWE LE+ VARN   L + RLFDAVMAS +
Subjt:  KIHGEFSYTRHYWECLEIVVARNEPALTKARLFDAVMASFW

TYK21863.1 uncharacterized protein E5676_scaffold836G00160 [Cucumis melo var. makuwa]4.1e-2443.97Show/hide
Query:  SHLTEKLLSHLEDRDQPVENGVILHVGEAVHGNFRTLQPSLDSSRVLSRWSEGRPLNQESSLKVWFLESPIHNKASSQNPELTLGRQII-EGKACWSSSF
        S  T++ L  L+D +Q +++G++L V E    N    Q   ++  +L +WS+ + +N  S L  WFLES IHNK  ++NPE TL R++I + K  W +  
Subjt:  SHLTEKLLSHLEDRDQPVENGVILHVGEAVHGNFRTLQPSLDSSRVLSRWSEGRPLNQESSLKVWFLESPIHNKASSQNPELTLGRQII-EGKACWSSSF

Query:  KIHGEFSYTRHYWECLEIVVARNEPALTKARLFDAVMASFW
        K+HGEF Y  HYWE LE+ VARN   L +A LFDAVMAS +
Subjt:  KIHGEFSYTRHYWECLEIVVARNEPALTKARLFDAVMASFW

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]8.9e-3536.27Show/hide
Query:  SHLTEKLLSHLEDRDQPVENGVILHVGEAVHGNFRTLQPSLDSSRVLSRWSEGRPLNQESSLKVWFLESPIHNKASSQNPELTLGRQII-EGKACWSSSF
        S  T++ L  L+D DQ +E G+IL V E  + N    Q   D+   L +WS+ R +N  SSLK WFLES IHNK  +++PE TLGR+II + K  W +  
Subjt:  SHLTEKLLSHLEDRDQPVENGVILHVGEAVHGNFRTLQPSLDSSRVLSRWSEGRPLNQESSLKVWFLESPIHNKASSQNPELTLGRQII-EGKACWSSSF

Query:  KIHGEFSYTRHYWECLEIVVARNEPALTKARLFDAVMASF------------------------------------------------------------
        K+HGEF Y  HYWE LE+VVARN   L +A LF+AVMAS                                                             
Subjt:  KIHGEFSYTRHYWECLEIVVARNEPALTKARLFDAVMASF------------------------------------------------------------

Query:  ------------------------------------WISFWFKR-DLKYKKPPARKAKKASRPRSTHNPDGVPIKCLDWSKRVL
                                            WISFW  R ++KY KPP RK KK SRPRSTHNPDG+PI+  DWSK  L
Subjt:  ------------------------------------WISFWFKR-DLKYKKPPARKAKKASRPRSTHNPDGVPIKCLDWSKRVL

TrEMBL top hitse value%identityAlignment
A0A5A7SRI5 Uncharacterized protein2.0e-2443.97Show/hide
Query:  SHLTEKLLSHLEDRDQPVENGVILHVGEAVHGNFRTLQPSLDSSRVLSRWSEGRPLNQESSLKVWFLESPIHNKASSQNPELTLGRQII-EGKACWSSSF
        S  T++ L  L+D +Q +++G++L V E    N    Q   ++  +L +WS+ + +N  S L  WFLES IHNK  ++NPE TL R++I + K  W +  
Subjt:  SHLTEKLLSHLEDRDQPVENGVILHVGEAVHGNFRTLQPSLDSSRVLSRWSEGRPLNQESSLKVWFLESPIHNKASSQNPELTLGRQII-EGKACWSSSF

Query:  KIHGEFSYTRHYWECLEIVVARNEPALTKARLFDAVMASFW
        K+HGEF Y  HYWE LE+ VARN   L +A LFDAVMAS +
Subjt:  KIHGEFSYTRHYWECLEIVVARNEPALTKARLFDAVMASFW

A0A5A7U4C3 Uncharacterized protein3.4e-2443.97Show/hide
Query:  SHLTEKLLSHLEDRDQPVENGVILHVGEAVHGNFRTLQPSLDSSRVLSRWSEGRPLNQESSLKVWFLESPIHNKASSQNPELTLGRQII-EGKACWSSSF
        S  T++ L  L+D +Q +++G++L V +    N    Q   ++  +L +WS+ + +N  S L  WFLES IHNK  ++NPE TLG Q+I + K  W +  
Subjt:  SHLTEKLLSHLEDRDQPVENGVILHVGEAVHGNFRTLQPSLDSSRVLSRWSEGRPLNQESSLKVWFLESPIHNKASSQNPELTLGRQII-EGKACWSSSF

Query:  KIHGEFSYTRHYWECLEIVVARNEPALTKARLFDAVMASFW
        K+HGEF Y  HYWE LE+ VARN   L + RLFDAVMAS +
Subjt:  KIHGEFSYTRHYWECLEIVVARNEPALTKARLFDAVMASFW

A0A5D3D2A0 PMD domain-containing protein4.0e-2534.16Show/hide
Query:  HLTEKLLS---HL---EDRDQPVENGVILHVGEAVHGNFRTLQPSLDSSRVLSRWSEGRPLNQESSLKVWFLESPIHNKASSQNPELTLGRQIIEGKACW
        + TE+ LS   HL    DR+QP E+ +  HV +   G+F    P LD++ +L R S   PL+       W L+S IHN+A + +  LTLG+ +IEG+  W
Subjt:  HLTEKLLS---HL---EDRDQPVENGVILHVGEAVHGNFRTLQPSLDSSRVLSRWSEGRPLNQESSLKVWFLESPIHNKASSQNPELTLGRQIIEGKACW

Query:  SSSFKIHGEFSYTRHYWECLEIVVARNEPALTKARLFDAVMASF------------------------------------------------------WI
         +  K+ GEF +T  YWE LE+VV RN   L  ARL+  V AS                                                       WI
Subjt:  SSSFKIHGEFSYTRHYWECLEIVVARNEPALTKARLFDAVMASF------------------------------------------------------WI

Query:  SFWFKRDLKYKKPPARKAKKASRPRSTHNPDGVPIKCLDWSKR
        SFW+     Y KP  RK KK SR +ST NPDG+ I+  DW+ R
Subjt:  SFWFKRDLKYKKPPARKAKKASRPRSTHNPDGVPIKCLDWSKR

A0A5D3DEA3 Uncharacterized protein2.0e-2443.97Show/hide
Query:  SHLTEKLLSHLEDRDQPVENGVILHVGEAVHGNFRTLQPSLDSSRVLSRWSEGRPLNQESSLKVWFLESPIHNKASSQNPELTLGRQII-EGKACWSSSF
        S  T++ L  L+D +Q +++G++L V E    N    Q   ++  +L +WS+ + +N  S L  WFLES IHNK  ++NPE TL R++I + K  W +  
Subjt:  SHLTEKLLSHLEDRDQPVENGVILHVGEAVHGNFRTLQPSLDSSRVLSRWSEGRPLNQESSLKVWFLESPIHNKASSQNPELTLGRQII-EGKACWSSSF

Query:  KIHGEFSYTRHYWECLEIVVARNEPALTKARLFDAVMASFW
        K+HGEF Y  HYWE LE+ VARN   L +A LFDAVMAS +
Subjt:  KIHGEFSYTRHYWECLEIVVARNEPALTKARLFDAVMASFW

A0A5D3E2X8 Putative mitochondrial protein4.5e-2437.09Show/hide
Query:  HLTEKLLSH------LEDRDQPVENGVILHVGEAVHGNFRTLQPSLDSSRVLSRWSEGRPLNQESSLKVWFLESPIHNKASSQNPELTLGRQIIEGKACW
        + TE+ LS       L DR+QP E+G+IL V +   G F    P LD++ VL R     PL++  S   W L+S IHN+A +    LTLG+++IEGK  W
Subjt:  HLTEKLLSH------LEDRDQPVENGVILHVGEAVHGNFRTLQPSLDSSRVLSRWSEGRPLNQESSLKVWFLESPIHNKASSQNPELTLGRQIIEGKACW

Query:  SSSFKIHGEFSYTRHYWECLEIVVA-------------------------------RNEPALTKARLFDAVMASFWISFWFKRDLKYKKPPARKAKKASR
         +  K+ GEF +T +YWE L++VVA                               RN+   +    F   + S WISFW+     Y KP  RK KKASR
Subjt:  SSSFKIHGEFSYTRHYWECLEIVVA-------------------------------RNEPALTKARLFDAVMASFWISFWFKRDLKYKKPPARKAKKASR

Query:  PRSTHNPDGVPIK
         +ST NPDG  I+
Subjt:  PRSTHNPDGVPIK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGATTGTCCTTTGATTTGTACGGGTGAGAGTGGCCTGTTCGCCGACTCAATAAGCCTACCATTTTGGGGACAAGACCGAGTGGGGAGCTGGGAACGTAGTCTTAC
AAGATGGAATTCACTCCTTCCCGATATTAGGGTAAGTAGAGGTCCATCAGGTCCCATCGGTAGCTCTATAAGGGCGTTGAGGCGAAACGGTCAAGAACAATCTCTAAATA
TGGTTAATGATCGTCTCCGCTGCGCTAGGGCTTTAATCCCTGCACGGTCGTCATCAAATTCACTTGCAGTGATTTCACCACCTAAAAACAGAGGAAAAGTTGGAATTTCC
CAGAAATGCGACCGCATTTCTGGGAAGGCAAAAATGAAATGCGACCGCATTTCTGGAAAAACAGAGGCCGTTCCGAGTTGCACGCGGGTTGTTGTTGACGAGTCTTCTTC
GCACCTAACTGAAAAACTGCTTAGTCATCTTGAAGATAGAGATCAACCTGTTGAAAATGGAGTCATTCTTCATGTAGGAGAGGCGGTGCATGGAAACTTTAGGACATTGC
AGCCTTCCTTAGATAGTTCTAGAGTCCTATCTAGATGGTCTGAGGGGAGGCCCTTGAATCAAGAATCATCCCTGAAAGTGTGGTTCCTAGAATCTCCAATACATAATAAA
GCGTCGAGTCAGAATCCAGAATTGACACTAGGTCGTCAAATTATTGAAGGTAAAGCTTGTTGGAGTTCGTCATTTAAAATCCATGGAGAATTCAGTTACACTCGCCATTA
TTGGGAATGTTTGGAAATTGTAGTTGCTCGCAATGAGCCGGCACTTACGAAGGCTCGTCTGTTTGATGCTGTGATGGCTTCCTTTTGGATTTCCTTTTGGTTTAAAAGAG
ATTTGAAGTATAAGAAGCCTCCTGCTCGAAAAGCAAAGAAAGCTAGTCGTCCTCGTTCGACTCATAATCCGGACGGAGTTCCTATCAAGTGTTTGGATTGGTCTAAGAGA
GTGTTGATTTTTATGCCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGGATTGTCCTTTGATTTGTACGGGTGAGAGTGGCCTGTTCGCCGACTCAATAAGCCTACCATTTTGGGGACAAGACCGAGTGGGGAGCTGGGAACGTAGTCTTAC
AAGATGGAATTCACTCCTTCCCGATATTAGGGTAAGTAGAGGTCCATCAGGTCCCATCGGTAGCTCTATAAGGGCGTTGAGGCGAAACGGTCAAGAACAATCTCTAAATA
TGGTTAATGATCGTCTCCGCTGCGCTAGGGCTTTAATCCCTGCACGGTCGTCATCAAATTCACTTGCAGTGATTTCACCACCTAAAAACAGAGGAAAAGTTGGAATTTCC
CAGAAATGCGACCGCATTTCTGGGAAGGCAAAAATGAAATGCGACCGCATTTCTGGAAAAACAGAGGCCGTTCCGAGTTGCACGCGGGTTGTTGTTGACGAGTCTTCTTC
GCACCTAACTGAAAAACTGCTTAGTCATCTTGAAGATAGAGATCAACCTGTTGAAAATGGAGTCATTCTTCATGTAGGAGAGGCGGTGCATGGAAACTTTAGGACATTGC
AGCCTTCCTTAGATAGTTCTAGAGTCCTATCTAGATGGTCTGAGGGGAGGCCCTTGAATCAAGAATCATCCCTGAAAGTGTGGTTCCTAGAATCTCCAATACATAATAAA
GCGTCGAGTCAGAATCCAGAATTGACACTAGGTCGTCAAATTATTGAAGGTAAAGCTTGTTGGAGTTCGTCATTTAAAATCCATGGAGAATTCAGTTACACTCGCCATTA
TTGGGAATGTTTGGAAATTGTAGTTGCTCGCAATGAGCCGGCACTTACGAAGGCTCGTCTGTTTGATGCTGTGATGGCTTCCTTTTGGATTTCCTTTTGGTTTAAAAGAG
ATTTGAAGTATAAGAAGCCTCCTGCTCGAAAAGCAAAGAAAGCTAGTCGTCCTCGTTCGACTCATAATCCGGACGGAGTTCCTATCAAGTGTTTGGATTGGTCTAAGAGA
GTGTTGATTTTTATGCCCTAA
Protein sequenceShow/hide protein sequence
MRDCPLICTGESGLFADSISLPFWGQDRVGSWERSLTRWNSLLPDIRVSRGPSGPIGSSIRALRRNGQEQSLNMVNDRLRCARALIPARSSSNSLAVISPPKNRGKVGIS
QKCDRISGKAKMKCDRISGKTEAVPSCTRVVVDESSSHLTEKLLSHLEDRDQPVENGVILHVGEAVHGNFRTLQPSLDSSRVLSRWSEGRPLNQESSLKVWFLESPIHNK
ASSQNPELTLGRQIIEGKACWSSSFKIHGEFSYTRHYWECLEIVVARNEPALTKARLFDAVMASFWISFWFKRDLKYKKPPARKAKKASRPRSTHNPDGVPIKCLDWSKR
VLIFMP