; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg011509 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg011509
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationscaffold8:14543918..14546061
RNA-Seq ExpressionSpg011509
SyntenySpg011509
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040420.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]3.5e-2470.93Show/hide
Query:  MQSQPLQNLGAKLSTSGFLFGLSYTEGTKRPRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRTSSSTWVELYIESVHIVNVLF
        MQSQPLQNLGA ++    LF LSY EGTKRPRGNR SLQTG+LDKTVEIELP+PDTLPT AES  ++SSTW+ELY ESVH+  + +
Subjt:  MQSQPLQNLGAKLSTSGFLFGLSYTEGTKRPRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRTSSSTWVELYIESVHIVNVLF

KAA0051980.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.5e-3054.67Show/hide
Query:  MQSQPLQNLGAKLSTSGFLFGLSYTEGTKRPRGNRSSLQTGELDKT-----------------VEIELPVPDTLPTSAESSRTSSSTWVELYIESVHI--
        MQSQPLQNLGA ++    LFGL Y EGTKRPRGNR+SLQTGELDKT                 VEIELPVPDTLPTSAESS ++SSTW+EL  E VH+  
Subjt:  MQSQPLQNLGAKLSTSGFLFGLSYTEGTKRPRGNRSSLQTGELDKT-----------------VEIELPVPDTLPTSAESSRTSSSTWVELYIESVHI--

Query:  -----------VNVLFNVQEGQRVSNEEDDVRWLHAIFRAKLVGGPGEGV
                   ++++FNV  G       D+V WLHA+F AK  GGPG GV
Subjt:  -----------VNVLFNVQEGQRVSNEEDDVRWLHAIFRAKLVGGPGEGV

KAA0054351.1 reverse transcriptase [Cucumis melo var. makuwa]5.0e-2347.44Show/hide
Query:  MQSQPLQNLGAKLSTSGFLFGLSYTEGTKRPRGNRSSLQTGELDKT-----------------VEIELPVPDTLPTSAESSRTSSSTWVELYIESVHI--
        MQSQPLQNLGA ++                PRGNR SLQT ELDKT                 VEI+L VPDTL TSAESS ++SSTW+ELY ESVH+  
Subjt:  MQSQPLQNLGAKLSTSGFLFGLSYTEGTKRPRGNRSSLQTGELDKT-----------------VEIELPVPDTLPTSAESSRTSSSTWVELYIESVHI--

Query:  -----------VNVLFNVQEGQRVSNEEDDVRWLHAIFRAKLVGGPGEGVTTWYQS
                   ++++FNV          D+V WLHA+FRA+  GG G GVTTWYQS
Subjt:  -----------VNVLFNVQEGQRVSNEEDDVRWLHAIFRAKLVGGPGEGVTTWYQS

KAA0058280.1 uncharacterized protein E6C27_scaffold274G006090 [Cucumis melo var. makuwa]9.8e-2743.07Show/hide
Query:  MQSQPLQNLGAKLSTSGFLFGLSYTEGTK-----------------------------------------------RPRGNRSSLQTGELDKT-------
        MQSQPLQNLGA ++    LF LSY EGTK                                                PRGNR SLQT ELDKT       
Subjt:  MQSQPLQNLGAKLSTSGFLFGLSYTEGTK-----------------------------------------------RPRGNRSSLQTGELDKT-------

Query:  --------VEIELPVPDTLPTSAESSRTSSSTWVELYIESVHI-------------VNVLFNVQEGQRVSNEEDDVRWLHAIFRAKLVGGPGEGVTTWYQ
                V IELPVPD LPTSAESS ++SSTW+ELY ESVH+             ++++FNV  G       DDV WLHA+FRAK VGGPG GVTTW  
Subjt:  --------VEIELPVPDTLPTSAESSRTSSSTWVELYIESVHI-------------VNVLFNVQEGQRVSNEEDDVRWLHAIFRAKLVGGPGEGVTTWYQ

Query:  SS
        S+
Subjt:  SS

TYK11835.1 uncharacterized protein E5676_scaffold152G00520 [Cucumis melo var. makuwa]3.2e-3047.59Show/hide
Query:  MQSQPLQNLGAKLSTSGFLFGLSYTEGTKR--------------------------------PRGNRSSLQTGELDKTV---------------EIELPV
        MQSQPLQNLGA ++    LF LSY EGTK                                 PRGNR SLQTGELDKTV                IELPV
Subjt:  MQSQPLQNLGAKLSTSGFLFGLSYTEGTKR--------------------------------PRGNRSSLQTGELDKTV---------------EIELPV

Query:  PDTLPTSAESSRTSSSTWVELYIESVHI-------------VNVLFNVQEGQRVSNEEDDVRWLHAIFRAKLVGGPGEGVTTWYQSS
        PDTLPTSAESS ++SSTW+ELY ESVH+             ++++FNV  G       DDV WLHA+FRAK VGGPG GVTTW  S+
Subjt:  PDTLPTSAESSRTSSSTWVELYIESVHI-------------VNVLFNVQEGQRVSNEEDDVRWLHAIFRAKLVGGPGEGVTTWYQSS

TrEMBL top hitse value%identityAlignment
A0A5A7TAS6 NBS-LRR type resistance protein1.7e-2470.93Show/hide
Query:  MQSQPLQNLGAKLSTSGFLFGLSYTEGTKRPRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRTSSSTWVELYIESVHIVNVLF
        MQSQPLQNLGA ++    LF LSY EGTKRPRGNR SLQTG+LDKTVEIELP+PDTLPT AES  ++SSTW+ELY ESVH+  + +
Subjt:  MQSQPLQNLGAKLSTSGFLFGLSYTEGTKRPRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRTSSSTWVELYIESVHIVNVLF

A0A5A7U9X4 DNA/RNA polymerases superfamily protein7.1e-3154.67Show/hide
Query:  MQSQPLQNLGAKLSTSGFLFGLSYTEGTKRPRGNRSSLQTGELDKT-----------------VEIELPVPDTLPTSAESSRTSSSTWVELYIESVHI--
        MQSQPLQNLGA ++    LFGL Y EGTKRPRGNR+SLQTGELDKT                 VEIELPVPDTLPTSAESS ++SSTW+EL  E VH+  
Subjt:  MQSQPLQNLGAKLSTSGFLFGLSYTEGTKRPRGNRSSLQTGELDKT-----------------VEIELPVPDTLPTSAESSRTSSSTWVELYIESVHI--

Query:  -----------VNVLFNVQEGQRVSNEEDDVRWLHAIFRAKLVGGPGEGV
                   ++++FNV  G       D+V WLHA+F AK  GGPG GV
Subjt:  -----------VNVLFNVQEGQRVSNEEDDVRWLHAIFRAKLVGGPGEGV

A0A5A7UT17 CCHC-type domain-containing protein4.7e-2743.07Show/hide
Query:  MQSQPLQNLGAKLSTSGFLFGLSYTEGTK-----------------------------------------------RPRGNRSSLQTGELDKT-------
        MQSQPLQNLGA ++    LF LSY EGTK                                                PRGNR SLQT ELDKT       
Subjt:  MQSQPLQNLGAKLSTSGFLFGLSYTEGTK-----------------------------------------------RPRGNRSSLQTGELDKT-------

Query:  --------VEIELPVPDTLPTSAESSRTSSSTWVELYIESVHI-------------VNVLFNVQEGQRVSNEEDDVRWLHAIFRAKLVGGPGEGVTTWYQ
                V IELPVPD LPTSAESS ++SSTW+ELY ESVH+             ++++FNV  G       DDV WLHA+FRAK VGGPG GVTTW  
Subjt:  --------VEIELPVPDTLPTSAESSRTSSSTWVELYIESVHI-------------VNVLFNVQEGQRVSNEEDDVRWLHAIFRAKLVGGPGEGVTTWYQ

Query:  SS
        S+
Subjt:  SS

A0A5D3CJX3 CCHC-type domain-containing protein1.6e-3047.59Show/hide
Query:  MQSQPLQNLGAKLSTSGFLFGLSYTEGTKR--------------------------------PRGNRSSLQTGELDKTV---------------EIELPV
        MQSQPLQNLGA ++    LF LSY EGTK                                 PRGNR SLQTGELDKTV                IELPV
Subjt:  MQSQPLQNLGAKLSTSGFLFGLSYTEGTKR--------------------------------PRGNRSSLQTGELDKTV---------------EIELPV

Query:  PDTLPTSAESSRTSSSTWVELYIESVHI-------------VNVLFNVQEGQRVSNEEDDVRWLHAIFRAKLVGGPGEGVTTWYQSS
        PDTLPTSAESS ++SSTW+ELY ESVH+             ++++FNV  G       DDV WLHA+FRAK VGGPG GVTTW  S+
Subjt:  PDTLPTSAESSRTSSSTWVELYIESVHI-------------VNVLFNVQEGQRVSNEEDDVRWLHAIFRAKLVGGPGEGVTTWYQSS

A0A5D3CMM1 Reverse transcriptase2.4e-2347.44Show/hide
Query:  MQSQPLQNLGAKLSTSGFLFGLSYTEGTKRPRGNRSSLQTGELDKT-----------------VEIELPVPDTLPTSAESSRTSSSTWVELYIESVHI--
        MQSQPLQNLGA ++                PRGNR SLQT ELDKT                 VEI+L VPDTL TSAESS ++SSTW+ELY ESVH+  
Subjt:  MQSQPLQNLGAKLSTSGFLFGLSYTEGTKRPRGNRSSLQTGELDKT-----------------VEIELPVPDTLPTSAESSRTSSSTWVELYIESVHI--

Query:  -----------VNVLFNVQEGQRVSNEEDDVRWLHAIFRAKLVGGPGEGVTTWYQS
                   ++++FNV          D+V WLHA+FRA+  GG G GVTTWYQS
Subjt:  -----------VNVLFNVQEGQRVSNEEDDVRWLHAIFRAKLVGGPGEGVTTWYQS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAGCCAGCCATTGCAGAATCTGGGTGCAAAACTGTCAACCTCTGGTTTTTTATTCGGTTTGAGCTACACAGAAGGAACTAAGAGGCCAAGAGGAAATAGGTCGAG
TCTACAAACCGGGGAACTAGATAAGACAGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCTAGAACAAGTTCCAGTACGTGGGTGGAGT
TGTATATTGAGTCTGTTCATATTGTAAATGTTTTGTTCAATGTTCAGGAGGGTCAGCGGGTATCGAATGAGGAGGACGATGTCCGTTGGCTTCACGCCATCTTTAGGGCT
AAGCTAGTAGGTGGTCCGGGAGAGGGTGTGACAACTTGGTATCAGAGCAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAAGCCAGCCATTGCAGAATCTGGGTGCAAAACTGTCAACCTCTGGTTTTTTATTCGGTTTGAGCTACACAGAAGGAACTAAGAGGCCAAGAGGAAATAGGTCGAG
TCTACAAACCGGGGAACTAGATAAGACAGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCTAGAACAAGTTCCAGTACGTGGGTGGAGT
TGTATATTGAGTCTGTTCATATTGTAAATGTTTTGTTCAATGTTCAGGAGGGTCAGCGGGTATCGAATGAGGAGGACGATGTCCGTTGGCTTCACGCCATCTTTAGGGCT
AAGCTAGTAGGTGGTCCGGGAGAGGGTGTGACAACTTGGTATCAGAGCAGTTAG
Protein sequenceShow/hide protein sequence
MQSQPLQNLGAKLSTSGFLFGLSYTEGTKRPRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRTSSSTWVELYIESVHIVNVLFNVQEGQRVSNEEDDVRWLHAIFRA
KLVGGPGEGVTTWYQSS