; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg011511 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg011511
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionB3 domain-containing transcription factor VRN1-like
Genome locationscaffold8:16647376..16648748
RNA-Seq ExpressionSpg011511
SyntenySpg011511
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003340 - B3 DNA binding domain
IPR015300 - DNA-binding pseudobarrel domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605261.1 B3 domain-containing transcription factor VRN1, partial [Cucurbita argyrosperma subsp. sororia]4.6e-15775.84Show/hide
Query:  MAFFTSPNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKKSDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLI
        MAFFTSP PHFFKIILHHTLIE KLDLP KFV N+  SLLH+ ATL LPDGA WEVELKKSDGK+SF RGW EFV+FY+VKAGYFVVF  EGN CFNVLI
Subjt:  MAFFTSPNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKKSDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLI

Query:  FDLSATEINYPMKPRTYHRKPKSDRNRGFDRRPPVLILKSESEEDEEDDSVQILNDEVLRKRRREKD---AYCSLRELKKMMRKNVKMNH-RFTTPQRFS
        FDLSATEI+YP+KPR + R+ + D  R FDRRPP+L+ KSE+ ED+EDDSV +LND V RKR+REKD   A+CSLRE+KKMMR N+K+ H RFTTPQRFS
Subjt:  FDLSATEINYPMKPRTYHRKPKSDRNRGFDRRPPVLILKSESEEDEEDDSVQILNDEVLRKRRREKD---AYCSLRELKKMMRKNVKMNH-RFTTPQRFS

Query:  DEEDEDE--------EEEDLEMNYSRRQSNYRGSAYDYGDGGRFSPESMRPVDRRRTPQPLTENQERVLLKASAFKLRTKNPSFMVTMRPSYIQTGNYLS
        D+E+EDE        EE+D E +YS RQ  YRGSA +  DGGRFSPESMRP+   RTP+PLTENQERVL  AS+FKLRTKNPSFMVTMRPSYIQTGNYLS
Subjt:  DEEDEDE--------EEEDLEMNYSRRQSNYRGSAYDYGDGGRFSPESMRPVDRRRTPQPLTENQERVLLKASAFKLRTKNPSFMVTMRPSYIQTGNYLS

Query:  LPRSFAERYLRESVDVKLEVADGRAWSVWCGVRWAFTRRRTELKGGWKRFAVDNRLQEGDVCVFELINKTPKVFFKVTIFHLPPN
        LPRSFAERYL+ES DVKLEVADGR WSVWCGVRWAFTRRRTELK GWKRFAVDN+L+EGDVCVFEL+N+ PKVFFKVTIF  P N
Subjt:  LPRSFAERYLRESVDVKLEVADGRAWSVWCGVRWAFTRRRTELKGGWKRFAVDNRLQEGDVCVFELINKTPKVFFKVTIFHLPPN

KAG7035223.1 B3 domain-containing transcription factor VRN1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-15675.58Show/hide
Query:  MAFFTSPNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKKSDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLI
        MAFFTSP PHFFKIILHHTLIE KLDLP KFV N+  SLLH+ ATL LPDGA WEVELKKSDGK+SF RGW EFV+FY+VKAGYFVVF  EGN CFNVLI
Subjt:  MAFFTSPNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKKSDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLI

Query:  FDLSATEINYPMKPRTYHRKPKSDRNRGFDRRPPVLILKSESEEDEEDDSVQILNDEVLRKRRREKD---AYCSLRELKKMMRKNVKMNH-RFTTPQRFS
        FDLSATEI+YP+KPR + R+ + D  R FDRRPP+L+ KSE+ ED+EDDSV +LND V RKR+REKD   A+CSLRE+KKMMR N+K+ H RFTTPQRFS
Subjt:  FDLSATEINYPMKPRTYHRKPKSDRNRGFDRRPPVLILKSESEEDEEDDSVQILNDEVLRKRRREKD---AYCSLRELKKMMRKNVKMNH-RFTTPQRFS

Query:  DEEDEDE--------EEEDLEMNYSRRQSNYRGSAYDYGDGGRFSPESMRPVDRRRTPQPLTENQERVLLKASAFKLRTKNPSFMVTMRPSYIQTGNYLS
        D+E+EDE        EE+D E +YS RQ  YRGSA +  DGGRFSPESMRP+   RTP+PLTENQERVL  AS+FKLRTKNPSFMVTMRPSYIQTGNYLS
Subjt:  DEEDEDE--------EEEDLEMNYSRRQSNYRGSAYDYGDGGRFSPESMRPVDRRRTPQPLTENQERVLLKASAFKLRTKNPSFMVTMRPSYIQTGNYLS

Query:  LPRSFAERYLRESVDVKLEVADGRAWSVWCGVRWAFTRRRTELKGGWKRFAVDNRLQEGDVCVFELINKTPKVFFKVTIFHLPPN
        LPRSFAERYL+ES DVKLEV DGR WSVWCGVRWAFTRRRTELK GWKRFAVDN+L+EGDVCVFEL+N+ PKVFFKVTIF  P N
Subjt:  LPRSFAERYLRESVDVKLEVADGRAWSVWCGVRWAFTRRRTELKGGWKRFAVDNRLQEGDVCVFELINKTPKVFFKVTIFHLPPN

XP_022947008.1 B3 domain-containing transcription factor VRN1-like isoform X2 [Cucurbita moschata]7.8e-15774.87Show/hide
Query:  MAFFTSPNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKKSDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLI
        MAFFTSP PHFFKIILHHTLIE KLDLP KFV N+  SLLH+ ATL LPDGA WEVELKKSDGK+SF RGW EFV+FY+VKAGYFVVF  EGN CFNVLI
Subjt:  MAFFTSPNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKKSDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLI

Query:  FDLSATEINYPMKPRTYHRKPKSDRNRGFDRRPPVLILKSESEEDEEDDSVQILNDEVLRKRRREKD---AYCSLRELKKMMRKNVKMNH-RFTTPQRFS
        FDLSATEI+YP+KPR + R+ + D  R FDRRPP+L+ KSE+ ED+EDDSV +LND V RKR+REKD   A+CSLRE+KKMMR N+K+ H RFTTPQRFS
Subjt:  FDLSATEINYPMKPRTYHRKPKSDRNRGFDRRPPVLILKSESEEDEEDDSVQILNDEVLRKRRREKD---AYCSLRELKKMMRKNVKMNH-RFTTPQRFS

Query:  DEEDEDE-------------EEEDLEMNYSRRQSNYRGSAYDYGDGGRFSPESMRPVDRRRTPQPLTENQERVLLKASAFKLRTKNPSFMVTMRPSYIQT
        D+E+EDE             EE+D E +YS RQ  YRGSA ++ DGGRFSPESMRP+   RTP+PLTENQERVL  AS+FKLRTKNPSFMVTMRPSYIQT
Subjt:  DEEDEDE-------------EEEDLEMNYSRRQSNYRGSAYDYGDGGRFSPESMRPVDRRRTPQPLTENQERVLLKASAFKLRTKNPSFMVTMRPSYIQT

Query:  GNYLSLPRSFAERYLRESVDVKLEVADGRAWSVWCGVRWAFTRRRTELKGGWKRFAVDNRLQEGDVCVFELINKTPKVFFKVTIFHLPPN
        GNYLSLPRSFAERYL+ES DVKLEVADGR WSVWCGVRWAFTRRRTELK GWKRFAVDN+L+EGDVCVFEL+N+ PKVFFKVTIF  P N
Subjt:  GNYLSLPRSFAERYLRESVDVKLEVADGRAWSVWCGVRWAFTRRRTELKGGWKRFAVDNRLQEGDVCVFELINKTPKVFFKVTIFHLPPN

XP_023007388.1 B3 domain-containing transcription factor VRN1-like [Cucurbita maxima]1.7e-15674.42Show/hide
Query:  MAFFTSPNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKKSDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLI
        MAFFTSP PHFFKIILHHTLIE KLDLP KFV N+  SLLH+ ATL+LPDGA WEVELKKSDGK+SF RGW EFV+FY+VKAGYFVVF  EGN CFNVLI
Subjt:  MAFFTSPNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKKSDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLI

Query:  FDLSATEINYPMKPRTYHRKPKSDRNRGFDRRPPVLILKSESEEDEEDDSVQILNDEVLRKRRREKD---AYCSLRELKKMMRKNVKMNH-RFTTPQRFS
        FDLSATEI+YP+KPR + R+ + D NR FDRRPP+L+ KSE+ ED+ED+SV +LND V RKR+REKD   A+CSLRE+KKMMR N+K+ H RFTTPQRFS
Subjt:  FDLSATEINYPMKPRTYHRKPKSDRNRGFDRRPPVLILKSESEEDEEDDSVQILNDEVLRKRRREKD---AYCSLRELKKMMRKNVKMNH-RFTTPQRFS

Query:  --------------DEEDEDEEEEDLEMNYSRRQSNYRGSAYDYGDGGRFSPESMRPVDRRRTPQPLTENQERVLLKASAFKLRTKNPSFMVTMRPSYIQ
                      DEEDE++EE++ E +YS RQ  YRGSA ++ DGGRFSPESMRP+   RTP+PLTENQERVL  AS+FKLRTKNPSFMVTMRPSYIQ
Subjt:  --------------DEEDEDEEEEDLEMNYSRRQSNYRGSAYDYGDGGRFSPESMRPVDRRRTPQPLTENQERVLLKASAFKLRTKNPSFMVTMRPSYIQ

Query:  TGNYLSLPRSFAERYLRESVDVKLEVADGRAWSVWCGVRWAFTRRRTELKGGWKRFAVDNRLQEGDVCVFELINKTPKVFFKVTIFHLPPN
        TGNYLSLPRSFAERYL+ES DVKLEVADGR WSVWCGVRWAFTRRRTELK GWKRFAVDN+L+EGDVCVFEL+N+ PKVFFKVTIF  P N
Subjt:  TGNYLSLPRSFAERYLRESVDVKLEVADGRAWSVWCGVRWAFTRRRTELKGGWKRFAVDNRLQEGDVCVFELINKTPKVFFKVTIFHLPPN

XP_023532571.1 B3 domain-containing transcription factor VRN1-like [Cucurbita pepo subsp. pepo]1.1e-15574.61Show/hide
Query:  MAFFTSPNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKKSDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLI
        MAFFTSP PHFFKIILHHTLIE KLDLP KFV N+  SLLH+ ATL+LPDGA WEVELKKSDGK+SF RGW EFV+FY+VKAGYFVVF  EGN CFNVLI
Subjt:  MAFFTSPNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKKSDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLI

Query:  FDLSATEINYPMKPRTYHRKPKSDRNRGFDRRPPVLILKSESEEDEEDDSVQILNDEVLRKRRREKD---AYCSLRELKKMMRKNVKMNH-RFTTPQRFS
        FDLSATE++YP+KPR + R+ + DRN  FDRRPP+L+ KSE+E  +EDDSV +LND V RKR+REKD   A+CSLRE+KKMMR N+K+ H RFTTPQRFS
Subjt:  FDLSATEINYPMKPRTYHRKPKSDRNRGFDRRPPVLILKSESEEDEEDDSVQILNDEVLRKRRREKD---AYCSLRELKKMMRKNVKMNH-RFTTPQRFS

Query:  DEEDEDE---------EEEDLEMNYSRRQSNYRGSAYDYGDGGRFSPESMRPVDRRRTPQPLTENQERVLLKASAFKLRTKNPSFMVTMRPSYIQTGNYL
        D+++EDE         EE+D E +YS R+  YRGSA ++ DGGRFSPESMRP+   RTP+PLTENQ+RVL  AS+FKLRTKNPSFMVTMRPSYIQTGNYL
Subjt:  DEEDEDE---------EEEDLEMNYSRRQSNYRGSAYDYGDGGRFSPESMRPVDRRRTPQPLTENQERVLLKASAFKLRTKNPSFMVTMRPSYIQTGNYL

Query:  SLPRSFAERYLRESVDVKLEVADGRAWSVWCGVRWAFTRRRTELKGGWKRFAVDNRLQEGDVCVFELINKTPKVFFKVTIFHLPPN
        SLPRSFAERYL+ES DVKLEVADGR WSVWCGVRWAFTRRRTELK GWKRFAVDN+L+EGDVCVFEL+N+ PKVFFKVTIF  P N
Subjt:  SLPRSFAERYLRESVDVKLEVADGRAWSVWCGVRWAFTRRRTELKGGWKRFAVDNRLQEGDVCVFELINKTPKVFFKVTIFHLPPN

TrEMBL top hitse value%identityAlignment
A0A1S3C614 B3 domain-containing transcription factor VRN1-like8.5e-13365.52Show/hide
Query:  MAFFTSPNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKKSDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLI
        M  F SPNPHFFKIILH  L + KLDLP KFVKN+GDSLL +   L+LPDGAKW  +L K DGK  F+RGW EFVKFYS++ GYF+VF  +G  CFNVLI
Subjt:  MAFFTSPNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKKSDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLI

Query:  FDLSATEINYPMKPRTYHRKPKSDRNRGFDRRPPVLILKSESEEDEEDDSVQILNDEVLRKRRR------EKDAYCSLRELKKMMRKNVKMNHRFTTPQR
        FD SATEI+YPM                  RRPPVLI KSESE++EE  S+ IL++  L+KR+R      E  AYCSLR++KK M   +  +  FTTPQ 
Subjt:  FDLSATEINYPMKPRTYHRKPKSDRNRGFDRRPPVLILKSESEEDEEDDSVQILNDEVLRKRRR------EKDAYCSLRELKKMMRKNVKMNHRFTTPQR

Query:  FSDEEDEDEEEEDLEMNYSRRQSNYRGSAYDYGDGGRFSPESMRPVDRRRTPQPLTENQERVLLKASAFKLRTKNPSFMVTMRPSYIQTGNYLSLPRSFA
        FSDE+++++E+EDLE NYS RQ+NYRGSAY+  + GR SPESMRP++ R+ PQ LTENQ  VL +AS+FK RTKNPSFMVTMRPSYIQTGN LSLPR F+
Subjt:  FSDEEDEDEEEEDLEMNYSRRQSNYRGSAYDYGDGGRFSPESMRPVDRRRTPQPLTENQERVLLKASAFKLRTKNPSFMVTMRPSYIQTGNYLSLPRSFA

Query:  ERYLRESVDVKLEVADGRAWSVWCGVRWAFTRRRTELKGGWKRFAVDNRLQEGDVCVFELINKTPKVFFKVTIFHLP
        ERY++ES+DVKLEV DGR W VWCGVRWAFTRRRTELKGGWKRFAVDN L+EGD+CVFELINKTPKV F VTIF LP
Subjt:  ERYLRESVDVKLEVADGRAWSVWCGVRWAFTRRRTELKGGWKRFAVDNRLQEGDVCVFELINKTPKVFFKVTIFHLP

A0A6J1DVA1 B3 domain-containing transcription factor VRN1-like1.4e-14371.43Show/hide
Query:  AFFTSPNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKKSDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLIF
        +FFTS  PHFFKIILH  LIEGKL+LPKKFV N+G SLL   A+L LP GAKWEVELKKSDGK+ F RGW EFV+FYSVK GYFVVF  EGN CFNV+IF
Subjt:  AFFTSPNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKKSDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLIF

Query:  DLSATEINYPMK-PRTYHRKPKSDRNRGFDRRPPVLILKSESEEDEEDD-SVQILNDEVLRKRRREKD----AYCSLRELKKMMRKNVKMNHRFTTPQRF
        DLSATE++YP+   R ++R     RNRGFDRR P+L+ K E EED++DD SV++LN  V RKR RE+D     YCSLR++KKMMR+ VK+  RFTTPQRF
Subjt:  DLSATEINYPMK-PRTYHRKPKSDRNRGFDRRPPVLILKSESEEDEEDD-SVQILNDEVLRKRRREKD----AYCSLRELKKMMRKNVKMNHRFTTPQRF

Query:  SD------EEDEDEEEEDLEMNYSRRQSNYRGSAYDYGDGGRFSPESMRPVDRRRTPQPLTENQERVLLKASAFKLRTKNPSFMVTMRPSYIQTGNYLSL
        +D      EEDE+EEEEDLEMNYSRRQ+NYR S  ++  GGRFSPESMRP    R PQPLTENQER+L +ASAFK  T+NPSFMVTMRPSYIQTGNYLSL
Subjt:  SD------EEDEDEEEEDLEMNYSRRQSNYRGSAYDYGDGGRFSPESMRPVDRRRTPQPLTENQERVLLKASAFKLRTKNPSFMVTMRPSYIQTGNYLSL

Query:  PRSFAERYLRESVDVKLEVADGRAWSVWCGVRWAFTRRRTELKGGWKRFAVDNRLQEGDVCVFELINK-TPKVFFKVTIFHLPPN
        PRSFAERYL+ESVDVKLE ADGR WSVWCGVRWAFTRRRTELK GWK FAV+N LQEGD+CVFELIN+ T KV F+VTIF  P N
Subjt:  PRSFAERYLRESVDVKLEVADGRAWSVWCGVRWAFTRRRTELKGGWKRFAVDNRLQEGDVCVFELINK-TPKVFFKVTIFHLPPN

A0A6J1G597 B3 domain-containing transcription factor VRN1-like isoform X13.3e-15370.7Show/hide
Query:  MAFFTSPNPHFFKIILHHTLIEGKL-----------------------DLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKKSDGKISFVRGWSEFVKF
        MAFFTSP PHFFKIILHHTLIE KL                       DLP KFV N+  SLLH+ ATL LPDGA WEVELKKSDGK+SF RGW EFV+F
Subjt:  MAFFTSPNPHFFKIILHHTLIEGKL-----------------------DLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKKSDGKISFVRGWSEFVKF

Query:  YSVKAGYFVVFGCEGNSCFNVLIFDLSATEINYPMKPRTYHRKPKSDRNRGFDRRPPVLILKSESEEDEEDDSVQILNDEVLRKRRREKD---AYCSLRE
        Y+VKAGYFVVF  EGN CFNVLIFDLSATEI+YP+KPR + R+ + D  R FDRRPP+L+ KSE+ ED+EDDSV +LND V RKR+REKD   A+CSLRE
Subjt:  YSVKAGYFVVFGCEGNSCFNVLIFDLSATEINYPMKPRTYHRKPKSDRNRGFDRRPPVLILKSESEEDEEDDSVQILNDEVLRKRRREKD---AYCSLRE

Query:  LKKMMRKNVKMNH-RFTTPQRFSDEEDEDE-------------EEEDLEMNYSRRQSNYRGSAYDYGDGGRFSPESMRPVDRRRTPQPLTENQERVLLKA
        +KKMMR N+K+ H RFTTPQRFSD+E+EDE             EE+D E +YS RQ  YRGSA ++ DGGRFSPESMRP+   RTP+PLTENQERVL  A
Subjt:  LKKMMRKNVKMNH-RFTTPQRFSDEEDEDE-------------EEEDLEMNYSRRQSNYRGSAYDYGDGGRFSPESMRPVDRRRTPQPLTENQERVLLKA

Query:  SAFKLRTKNPSFMVTMRPSYIQTGNYLSLPRSFAERYLRESVDVKLEVADGRAWSVWCGVRWAFTRRRTELKGGWKRFAVDNRLQEGDVCVFELINKTPK
        S+FKLRTKNPSFMVTMRPSYIQTGNYLSLPRSFAERYL+ES DVKLEVADGR WSVWCGVRWAFTRRRTELK GWKRFAVDN+L+EGDVCVFEL+N+ PK
Subjt:  SAFKLRTKNPSFMVTMRPSYIQTGNYLSLPRSFAERYLRESVDVKLEVADGRAWSVWCGVRWAFTRRRTELKGGWKRFAVDNRLQEGDVCVFELINKTPK

Query:  VFFKVTIFHLPPN
        VFFKVTIF  P N
Subjt:  VFFKVTIFHLPPN

A0A6J1G5F5 B3 domain-containing transcription factor VRN1-like isoform X23.8e-15774.87Show/hide
Query:  MAFFTSPNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKKSDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLI
        MAFFTSP PHFFKIILHHTLIE KLDLP KFV N+  SLLH+ ATL LPDGA WEVELKKSDGK+SF RGW EFV+FY+VKAGYFVVF  EGN CFNVLI
Subjt:  MAFFTSPNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKKSDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLI

Query:  FDLSATEINYPMKPRTYHRKPKSDRNRGFDRRPPVLILKSESEEDEEDDSVQILNDEVLRKRRREKD---AYCSLRELKKMMRKNVKMNH-RFTTPQRFS
        FDLSATEI+YP+KPR + R+ + D  R FDRRPP+L+ KSE+ ED+EDDSV +LND V RKR+REKD   A+CSLRE+KKMMR N+K+ H RFTTPQRFS
Subjt:  FDLSATEINYPMKPRTYHRKPKSDRNRGFDRRPPVLILKSESEEDEEDDSVQILNDEVLRKRRREKD---AYCSLRELKKMMRKNVKMNH-RFTTPQRFS

Query:  DEEDEDE-------------EEEDLEMNYSRRQSNYRGSAYDYGDGGRFSPESMRPVDRRRTPQPLTENQERVLLKASAFKLRTKNPSFMVTMRPSYIQT
        D+E+EDE             EE+D E +YS RQ  YRGSA ++ DGGRFSPESMRP+   RTP+PLTENQERVL  AS+FKLRTKNPSFMVTMRPSYIQT
Subjt:  DEEDEDE-------------EEEDLEMNYSRRQSNYRGSAYDYGDGGRFSPESMRPVDRRRTPQPLTENQERVLLKASAFKLRTKNPSFMVTMRPSYIQT

Query:  GNYLSLPRSFAERYLRESVDVKLEVADGRAWSVWCGVRWAFTRRRTELKGGWKRFAVDNRLQEGDVCVFELINKTPKVFFKVTIFHLPPN
        GNYLSLPRSFAERYL+ES DVKLEVADGR WSVWCGVRWAFTRRRTELK GWKRFAVDN+L+EGDVCVFEL+N+ PKVFFKVTIF  P N
Subjt:  GNYLSLPRSFAERYLRESVDVKLEVADGRAWSVWCGVRWAFTRRRTELKGGWKRFAVDNRLQEGDVCVFELINKTPKVFFKVTIFHLPPN

A0A6J1L7I9 B3 domain-containing transcription factor VRN1-like8.4e-15774.42Show/hide
Query:  MAFFTSPNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKKSDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLI
        MAFFTSP PHFFKIILHHTLIE KLDLP KFV N+  SLLH+ ATL+LPDGA WEVELKKSDGK+SF RGW EFV+FY+VKAGYFVVF  EGN CFNVLI
Subjt:  MAFFTSPNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKKSDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLI

Query:  FDLSATEINYPMKPRTYHRKPKSDRNRGFDRRPPVLILKSESEEDEEDDSVQILNDEVLRKRRREKD---AYCSLRELKKMMRKNVKMNH-RFTTPQRFS
        FDLSATEI+YP+KPR + R+ + D NR FDRRPP+L+ KSE+ ED+ED+SV +LND V RKR+REKD   A+CSLRE+KKMMR N+K+ H RFTTPQRFS
Subjt:  FDLSATEINYPMKPRTYHRKPKSDRNRGFDRRPPVLILKSESEEDEEDDSVQILNDEVLRKRRREKD---AYCSLRELKKMMRKNVKMNH-RFTTPQRFS

Query:  --------------DEEDEDEEEEDLEMNYSRRQSNYRGSAYDYGDGGRFSPESMRPVDRRRTPQPLTENQERVLLKASAFKLRTKNPSFMVTMRPSYIQ
                      DEEDE++EE++ E +YS RQ  YRGSA ++ DGGRFSPESMRP+   RTP+PLTENQERVL  AS+FKLRTKNPSFMVTMRPSYIQ
Subjt:  --------------DEEDEDEEEEDLEMNYSRRQSNYRGSAYDYGDGGRFSPESMRPVDRRRTPQPLTENQERVLLKASAFKLRTKNPSFMVTMRPSYIQ

Query:  TGNYLSLPRSFAERYLRESVDVKLEVADGRAWSVWCGVRWAFTRRRTELKGGWKRFAVDNRLQEGDVCVFELINKTPKVFFKVTIFHLPPN
        TGNYLSLPRSFAERYL+ES DVKLEVADGR WSVWCGVRWAFTRRRTELK GWKRFAVDN+L+EGDVCVFEL+N+ PKVFFKVTIF  P N
Subjt:  TGNYLSLPRSFAERYLRESVDVKLEVADGRAWSVWCGVRWAFTRRRTELKGGWKRFAVDNRLQEGDVCVFELINKTPKVFFKVTIFHLPPN

SwissProt top hitse value%identityAlignment
Q2R9D2 B3 domain-containing protein Os11g01976003.1e-1525.38Show/hide
Query:  FFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKAT--LNLPD--GAKWEVELKKSDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLIFDLSAT
        FF+++L    +E ++ +P  F     +  L ++ T  ++L D  G KW  EL        FV GW EFV+  S++ G F+VF  +  S F+V +F+ S  
Subjt:  FFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKAT--LNLPD--GAKWEVELKKSDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLIFDLSAT

Query:  EINYPMKPRTYHRKP------KSDRNRG--------FDRRPPVLILKSESEEDEEDDSVQILNDEVLRKRRREKDAYCSLRELKKM-----MRKNVKMNH
        +     K  T+   P      K++ + G         ++  P L   +        D   ++ D V+  ++  +   C     K+        K    +H
Subjt:  EINYPMKPRTYHRKP------KSDRNRG--------FDRRPPVLILKSESEEDEEDDSVQILNDEVLRKRRREKDAYCSLRELKKM-----MRKNVKMNH

Query:  RFTTPQRFSDEEDEDEEEE---DLEMNYSRRQSNYRGSAYDYGDGGRFSPESMRPVDRRRTPQPLTE-NQERVLLKASAFKLRTKNPSFMVTMRPSYIQT
          T     S +ED    +       M +   + + RG     G         +  + +RR   P+TE  ++  L +A  FK  +KNP  +  M  SY+  
Subjt:  RFTTPQRFSDEEDEDEEEE---DLEMNYSRRQSNYRGSAYDYGDGGRFSPESMRPVDRRRTPQPLTE-NQERVLLKASAFKLRTKNPSFMVTMRPSYIQT

Query:  GNYLSLPRSFAERYL-RESVDVKLEVADGRAWSVWCGVRWAFTRRRTELKGGWKRFAVDNRLQEGDVCVFELINKTPKVFFKVTIFHLPP
        G ++++P  F    L   +  + L    G+AW V     +   R      GGW +FAV N L++ DVCVFEL+ K      KV I+ + P
Subjt:  GNYLSLPRSFAERYL-RESVDVKLEVADGRAWSVWCGVRWAFTRRRTELKGGWKRFAVDNRLQEGDVCVFELINKTPKVFFKVTIFHLPP

Q84R27 B3 domain-containing protein At3g189603.1e-1540.19Show/hide
Query:  SPNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKKSDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLIFDLSA
        SP   FFK++L  T+ +  + +P +FVK  G S L    TL  P G K  ++LK+   +I F  GWSEF + +S++ G+F++F  + NS F V+IF++SA
Subjt:  SPNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKKSDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLIFDLSA

Query:  TEINYPM
         E  YP+
Subjt:  TEINYPM

Q8L3W1 B3 domain-containing transcription factor VRN18.1e-3232.7Show/hide
Query:  PNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKKSDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLIFDLSAT
        P P F K+I   T+ E +L +P KFV    D L  + A L +PDG  W V L+K+D KI F  GW EFV  YS++ GY ++F  EGNS F+V IF+LS +
Subjt:  PNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKKSDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLIFDLSAT

Query:  EINYPMKPRTYHRKPKSDRNRGFDRRPPVLILKSESEEDEEDDSVQILNDEVLRKRRRE-----KDAYCSLRELKKMMRKNVKMNHRFTTPQRFSDEEDE
        EIN       YH     D      +R  +       E+ E++D+  I    V      E        Y S   ++ +    VK      TP+       +
Subjt:  EINYPMKPRTYHRKPKSDRNRGFDRRPPVLILKSESEEDEEDDSVQILNDEVLRKRRRE-----KDAYCSLRELKKMMRKNVKMNHRFTTPQRFSDEEDE

Query:  DEEEEDLEMNYSRRQSNYRGSAYDYGDGGRFSPESMRPVDRRRTPQPLTENQERVLLKASAFKLRTKNPSFMVTMRPSYIQTGNYLSLPRSFAERYLRE-
         +  +  E+N S  + +      D  +  +F   +     R+RT     E +ER +  A  F+    NP F V +RPSY+  G  + LP  FAE+YL   
Subjt:  DEEEEDLEMNYSRRQSNYRGSAYDYGDGGRFSPESMRPVDRRRTPQPLTENQERVLLKASAFKLRTKNPSFMVTMRPSYIQTGNYLSLPRSFAERYLRE-

Query:  SVDVKLEVADGRAWSVWCGVRWAFTRRRTELKGGWKRFAVDNRLQEGDVCVFELINKTPKVFFKVTIFHL
        S  +K+++A+ + W V C     +   R +   GW  F ++N L EGDVCVFEL+ +T     KVT F +
Subjt:  SVDVKLEVADGRAWSVWCGVRWAFTRRRTELKGGWKRFAVDNRLQEGDVCVFELINKTPKVFFKVTIFHL

Q9XIB4 B3 domain-containing protein At1g494751.8e-1533.97Show/hide
Query:  FFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKKSDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLIFDLSATEINY
        F KIIL   +IE  + +P +FV+      L    TL  P G K  + +K+   ++ F +GWSEF + +S+  G+F+ F  EG+SCF V+IFD+SA+EI Y
Subjt:  FFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKKSDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLIFDLSATEINY

Query:  PMKPRTYHRKP-KSDRNRGFDRRPPVLILKSESEEDEEDDSVQILNDEVLRKRRRE
        P+     +R+    D  +GF              E  +DD   +  DE+L+K++++
Subjt:  PMKPRTYHRKP-KSDRNRGFDRRPPVLILKSESEEDEEDDSVQILNDEVLRKRRRE

Q9ZSH7 B3 domain-containing protein At4g015806.9e-1533.54Show/hide
Query:  SPNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKKSDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLIFDLSA
        SP   FFK++L  T+ +  + +P +FVK  G S L    TL  P G K  ++LK+   +I F  GWSEF + +S++ G+F++F  + NS F V+IF+ SA
Subjt:  SPNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKKSDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLIFDLSA

Query:  TEINYPMKP------------------RTYHRKPKSDRNRGFDRRPPVLILKSESEEDEEDDSV
         E NYP+                     T H+  K  R+  FD+    + +    +E+EED  V
Subjt:  TEINYPMKP------------------RTYHRKPKSDRNRGFDRRPPVLILKSESEEDEEDDSV

Arabidopsis top hitse value%identityAlignment
AT1G49475.1 AP2/B3-like transcriptional factor family protein1.3e-1633.97Show/hide
Query:  FFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKKSDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLIFDLSATEINY
        F KIIL   +IE  + +P +FV+      L    TL  P G K  + +K+   ++ F +GWSEF + +S+  G+F+ F  EG+SCF V+IFD+SA+EI Y
Subjt:  FFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKKSDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLIFDLSATEINY

Query:  PMKPRTYHRKP-KSDRNRGFDRRPPVLILKSESEEDEEDDSVQILNDEVLRKRRRE
        P+     +R+    D  +GF              E  +DD   +  DE+L+K++++
Subjt:  PMKPRTYHRKP-KSDRNRGFDRRPPVLILKSESEEDEEDDSVQILNDEVLRKRRRE

AT1G49480.1 related to vernalization1 11.7e-1336.92Show/hide
Query:  RRRTPQPLTENQERVLLKASAFKLRTKNPSFMVTMRPSYIQTGNYLSLPRSFAERYLRE-SVDVKLEVADGRAWSVWCGVRWAFTRRRTELKGGWKRFAV
        R+RT     E +ER +  A  F+    NP F V +RPSY+  G  + LP  FAE+YL   S  +KL++ + + W V C     +   R +   GW  F +
Subjt:  RRRTPQPLTENQERVLLKASAFKLRTKNPSFMVTMRPSYIQTGNYLSLPRSFAERYLRE-SVDVKLEVADGRAWSVWCGVRWAFTRRRTELKGGWKRFAV

Query:  DNRLQEGDVCVFELINKTPKVFFKVTIFHL
        +N + EGDVCVFEL+ +T     +VT F +
Subjt:  DNRLQEGDVCVFELINKTPKVFFKVTIFHL

AT3G18960.1 AP2/B3-like transcriptional factor family protein2.2e-1640.19Show/hide
Query:  SPNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKKSDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLIFDLSA
        SP   FFK++L  T+ +  + +P +FVK  G S L    TL  P G K  ++LK+   +I F  GWSEF + +S++ G+F++F  + NS F V+IF++SA
Subjt:  SPNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKKSDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLIFDLSA

Query:  TEINYPM
         E  YP+
Subjt:  TEINYPM

AT3G18990.1 AP2/B3-like transcriptional factor family protein5.8e-3332.7Show/hide
Query:  PNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKKSDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLIFDLSAT
        P P F K+I   T+ E +L +P KFV    D L  + A L +PDG  W V L+K+D KI F  GW EFV  YS++ GY ++F  EGNS F+V IF+LS +
Subjt:  PNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKKSDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLIFDLSAT

Query:  EINYPMKPRTYHRKPKSDRNRGFDRRPPVLILKSESEEDEEDDSVQILNDEVLRKRRRE-----KDAYCSLRELKKMMRKNVKMNHRFTTPQRFSDEEDE
        EIN       YH     D      +R  +       E+ E++D+  I    V      E        Y S   ++ +    VK      TP+       +
Subjt:  EINYPMKPRTYHRKPKSDRNRGFDRRPPVLILKSESEEDEEDDSVQILNDEVLRKRRRE-----KDAYCSLRELKKMMRKNVKMNHRFTTPQRFSDEEDE

Query:  DEEEEDLEMNYSRRQSNYRGSAYDYGDGGRFSPESMRPVDRRRTPQPLTENQERVLLKASAFKLRTKNPSFMVTMRPSYIQTGNYLSLPRSFAERYLRE-
         +  +  E+N S  + +      D  +  +F   +     R+RT     E +ER +  A  F+    NP F V +RPSY+  G  + LP  FAE+YL   
Subjt:  DEEEEDLEMNYSRRQSNYRGSAYDYGDGGRFSPESMRPVDRRRTPQPLTENQERVLLKASAFKLRTKNPSFMVTMRPSYIQTGNYLSLPRSFAERYLRE-

Query:  SVDVKLEVADGRAWSVWCGVRWAFTRRRTELKGGWKRFAVDNRLQEGDVCVFELINKTPKVFFKVTIFHL
        S  +K+++A+ + W V C     +   R +   GW  F ++N L EGDVCVFEL+ +T     KVT F +
Subjt:  SVDVKLEVADGRAWSVWCGVRWAFTRRRTELKGGWKRFAVDNRLQEGDVCVFELINKTPKVFFKVTIFHL

AT4G01580.1 AP2/B3-like transcriptional factor family protein4.9e-1633.54Show/hide
Query:  SPNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKKSDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLIFDLSA
        SP   FFK++L  T+ +  + +P +FVK  G S L    TL  P G K  ++LK+   +I F  GWSEF + +S++ G+F++F  + NS F V+IF+ SA
Subjt:  SPNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKKSDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLIFDLSA

Query:  TEINYPMKP------------------RTYHRKPKSDRNRGFDRRPPVLILKSESEEDEEDDSV
         E NYP+                     T H+  K  R+  FD+    + +    +E+EED  V
Subjt:  TEINYPMKP------------------RTYHRKPKSDRNRGFDRRPPVLILKSESEEDEEDDSV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTCTTCACTTCCCCAAATCCCCATTTCTTCAAGATCATTCTCCACCACACTCTCATTGAAGGAAAACTCGATCTTCCCAAGAAGTTCGTCAAGAACGATGGTGA
TTCTCTGTTACACAGCAAGGCCACTCTCAACCTTCCCGACGGCGCAAAGTGGGAGGTCGAACTGAAGAAATCGGACGGAAAAATCTCGTTTGTGAGAGGCTGGTCGGAAT
TCGTGAAGTTTTACTCTGTCAAAGCTGGATATTTCGTTGTTTTCGGATGCGAAGGAAATTCCTGCTTCAATGTCCTCATTTTCGACTTGAGTGCTACGGAGATCAATTAC
CCGATGAAGCCGCGGACCTACCATCGGAAGCCTAAATCAGATCGCAACAGAGGCTTTGATCGCCGGCCGCCTGTTCTGATTCTGAAAAGCGAAAGCGAAGAAGATGAAGA
AGACGACTCTGTTCAGATACTGAACGACGAGGTTTTGAGGAAGAGAAGAAGAGAGAAAGACGCGTATTGTTCGCTACGAGAGCTGAAGAAGATGATGAGGAAGAACGTGA
AGATGAATCATCGATTCACTACGCCTCAACGATTCAGCGATGAAGAAGATGAAGATGAAGAAGAAGAAGATCTGGAAATGAATTACTCACGGAGACAGAGCAATTACAGA
GGATCAGCGTATGATTACGGAGATGGCGGGCGATTCAGTCCGGAATCGATGAGACCGGTGGATCGTCGAAGGACGCCGCAGCCATTGACGGAGAATCAAGAGAGAGTTCT
ACTGAAAGCAAGTGCGTTCAAATTGAGGACGAAGAATCCTTCGTTCATGGTGACGATGAGGCCCTCGTACATCCAAACAGGAAATTACCTGAGCTTGCCGAGGAGCTTCG
CGGAGAGGTACCTGAGGGAGTCGGTGGATGTGAAGCTGGAGGTGGCGGACGGAAGGGCATGGAGCGTGTGGTGCGGCGTGCGGTGGGCGTTCACGCGGCGGCGGACGGAA
CTGAAAGGCGGTTGGAAGAGATTCGCTGTGGATAATCGGTTGCAGGAAGGCGACGTCTGTGTGTTCGAGTTGATCAACAAAACCCCCAAAGTCTTTTTCAAAGTCACCAT
TTTCCATCTTCCTCCTAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTTCTTCACTTCCCCAAATCCCCATTTCTTCAAGATCATTCTCCACCACACTCTCATTGAAGGAAAACTCGATCTTCCCAAGAAGTTCGTCAAGAACGATGGTGA
TTCTCTGTTACACAGCAAGGCCACTCTCAACCTTCCCGACGGCGCAAAGTGGGAGGTCGAACTGAAGAAATCGGACGGAAAAATCTCGTTTGTGAGAGGCTGGTCGGAAT
TCGTGAAGTTTTACTCTGTCAAAGCTGGATATTTCGTTGTTTTCGGATGCGAAGGAAATTCCTGCTTCAATGTCCTCATTTTCGACTTGAGTGCTACGGAGATCAATTAC
CCGATGAAGCCGCGGACCTACCATCGGAAGCCTAAATCAGATCGCAACAGAGGCTTTGATCGCCGGCCGCCTGTTCTGATTCTGAAAAGCGAAAGCGAAGAAGATGAAGA
AGACGACTCTGTTCAGATACTGAACGACGAGGTTTTGAGGAAGAGAAGAAGAGAGAAAGACGCGTATTGTTCGCTACGAGAGCTGAAGAAGATGATGAGGAAGAACGTGA
AGATGAATCATCGATTCACTACGCCTCAACGATTCAGCGATGAAGAAGATGAAGATGAAGAAGAAGAAGATCTGGAAATGAATTACTCACGGAGACAGAGCAATTACAGA
GGATCAGCGTATGATTACGGAGATGGCGGGCGATTCAGTCCGGAATCGATGAGACCGGTGGATCGTCGAAGGACGCCGCAGCCATTGACGGAGAATCAAGAGAGAGTTCT
ACTGAAAGCAAGTGCGTTCAAATTGAGGACGAAGAATCCTTCGTTCATGGTGACGATGAGGCCCTCGTACATCCAAACAGGAAATTACCTGAGCTTGCCGAGGAGCTTCG
CGGAGAGGTACCTGAGGGAGTCGGTGGATGTGAAGCTGGAGGTGGCGGACGGAAGGGCATGGAGCGTGTGGTGCGGCGTGCGGTGGGCGTTCACGCGGCGGCGGACGGAA
CTGAAAGGCGGTTGGAAGAGATTCGCTGTGGATAATCGGTTGCAGGAAGGCGACGTCTGTGTGTTCGAGTTGATCAACAAAACCCCCAAAGTCTTTTTCAAAGTCACCAT
TTTCCATCTTCCTCCTAACTAA
Protein sequenceShow/hide protein sequence
MAFFTSPNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKKSDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLIFDLSATEINY
PMKPRTYHRKPKSDRNRGFDRRPPVLILKSESEEDEEDDSVQILNDEVLRKRRREKDAYCSLRELKKMMRKNVKMNHRFTTPQRFSDEEDEDEEEEDLEMNYSRRQSNYR
GSAYDYGDGGRFSPESMRPVDRRRTPQPLTENQERVLLKASAFKLRTKNPSFMVTMRPSYIQTGNYLSLPRSFAERYLRESVDVKLEVADGRAWSVWCGVRWAFTRRRTE
LKGGWKRFAVDNRLQEGDVCVFELINKTPKVFFKVTIFHLPPN