; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg011514 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg011514
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotransposon protein
Genome locationscaffold8:13144954..13149181
RNA-Seq ExpressionSpg011514
SyntenySpg011514
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34114.1 retrotransposon protein [Cucumis melo subsp. melo]9.5e-4329.43Show/hide
Query:  DPMWKWFQNCLGLLDGTYIKVNVIVLDRPRYRTRKGEIATNVLAISDTKGDFTFVLPGKEGSATNSRVHRDAISRPNGLKVPKGSSHYTEVSLGPEEDDA
        D  W+WF+NCLG LDGTYIKVNV   DR RYRTRKGE+ATNVL + DTKGDF +VL G EGSA +SR+ RDA+SRPN LKVPKG  +Y  V +G    + 
Subjt:  DPMWKWFQNCLGLLDGTYIKVNVIVLDRPRYRTRKGEIATNVLAISDTKGDFTFVLPGKEGSATNSRVHRDAISRPNGLKVPKGSSHYTEVSLGPEEDDA

Query:  PLLKPRNQPLREHTSTY------PNRGRSEFHLVLLCS----QHPFGLAPEMDTPTRMSPTWMLWINASVSNTKCL----------------TFPQCAYS
         L   R Q  R H   +      P+  +  F++    +    +  FG+        R    + + +        CL                   +   +
Subjt:  PLLKPRNQPLREHTSTY------PNRGRSEFHLVLLCS----QHPFGLAPEMDTPTRMSPTWMLWINASVSNTKCL----------------TFPQCAYS

Query:  HGT--------------------------MTNSSRAPRHRWTKNKDAELVEPLVSIVHVGGWRSDSGTFRPGR------------PSEN-----------
        H T                          MT+SSR P+H WTK ++A LVE LV +V+ GGWRSD+GTFRPG             P  N           
Subjt:  HGT--------------------------MTNSSRAPRHRWTKNKDAELVEPLVSIVHVGGWRSDSGTFRPGR------------PSEN-----------

Query:  -----------------------------------------------------------------------------------------------DIPTS
                                                                                                       D    
Subjt:  -----------------------------------------------------------------------------------------------DIPTS

Query:  PFTMLTANMSEDEPRGTPGSRTCPTRSSSRGSKRKRSGSDMHIAKIAREEMASYTEQLKSIAEWPKEKRATEVNFRDKIVTHLMEVPELENRKRVKLMDI
        P      NMS D+   T  +R    R+ S GSKRKR G       I R  +    EQL  IAEWP  +R      R +IV HL  +PEL    R +LM I
Subjt:  PFTMLTANMSEDEPRGTPGSRTCPTRSSSRGSKRKRSGSDMHIAKIAREEMASYTEQLKSIAEWPKEKRATEVNFRDKIVTHLMEVPELENRKRVKLMDI

Query:  LFNNMKTIEGFFSILALLKLEYCEYLLDKH
        L  N+  ++ F  +   +K  YC  +L ++
Subjt:  LFNNMKTIEGFFSILALLKLEYCEYLLDKH

KAA0033290.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.4e-4635.11Show/hide
Query:  MDPMWKWFQNCLGLLDGTYIKVNVIVLDRPRYRTRKGEIATNVLAISDTKGDFTFVLPGKEGSATNSRVHRDAISRPNGLKVPKGSSHYTEVSLGPEEDD
        MDP WKWF+NCLG LD TYIKVNV   DRPRY TRKGE+A NVL + DTKGDF FVL G EGSA +SR+ RDAISR NGLKVPKG  +  +      E  
Subjt:  MDPMWKWFQNCLGLLDGTYIKVNVIVLDRPRYRTRKGEIATNVLAISDTKGDFTFVLPGKEGSATNSRVHRDAISRPNGLKVPKGSSHYTEVSLGPEEDD

Query:  APLLKPRNQPLRE--HTSTYPNRGRSEFHLVLLCSQHPFGLAPEMDTPTRMSPTWMLWINASV--SNTKCLTFPQCAYSHG----TMTNSS---------
            +     L E    S  P   R  F++    +++    A  +     +   W +    S    + +C T   C   H      MTNS          
Subjt:  APLLKPRNQPLRE--HTSTYPNRGRSEFHLVLLCSQHPFGLAPEMDTPTRMSPTWMLWINASV--SNTKCLTFPQCAYSHG----TMTNSS---------

Query:  -------------RAPRHRWTKNKDAELVEPLV--------SIVHVGG----WRSDSGTFRP----------GRPSENDIPTSPFTMLTA---NMSEDEP
                         + W++ +D    + L+         + +V G     R+ S TF            G    +D       M+ +   +MS DE 
Subjt:  -------------RAPRHRWTKNKDAELVEPLV--------SIVHVGG----WRSDSGTFRP----------GRPSENDIPTSPFTMLTA---NMSEDEP

Query:  RGTPGSRTCPTRSSSRGSKRKRSGSDMHIAKIAREEMASYTEQLKSIAEWPKEKRATEVNFRDKIVTHLMEVPELENRKRVKLMDILFNNMKTIEGFFSI
         G    +    ++ S GSKRK+        ++ +  +    +QLK+IA WPKEKRATEV  R +++  L ++PEL++R R KL+ ILF +++ IEGF SI
Subjt:  RGTPGSRTCPTRSSSRGSKRKRSGSDMHIAKIAREEMASYTEQLKSIAEWPKEKRATEVNFRDKIVTHLMEVPELENRKRVKLMDILFNNMKTIEGFFSI

Query:  LALLKLEYCEYLL
            KLEYC  LL
Subjt:  LALLKLEYCEYLL

KAA0034843.1 retrotransposon protein [Cucumis melo var. makuwa]9.9e-4043.03Show/hide
Query:  DPMWKWFQNCLGLLDGTYIKVNVIVLDRPRYRTRKGEIATNVLAISDTKGDFTFVLPGKEGSATNSRVHRDAISRPNGLKVPKGSSHYTEVSLGPEEDDA
        D  W+WF+NCLG LDGTYIKVNV   DR RYRTRKGE+ATNVL + DTKGDF +VL G EGSA +SR+ RDA+SRPN LKVPKG  +Y  V  G    + 
Subjt:  DPMWKWFQNCLGLLDGTYIKVNVIVLDRPRYRTRKGEIATNVLAISDTKGDFTFVLPGKEGSATNSRVHRDAISRPNGLKVPKGSSHYTEVSLGPEEDDA

Query:  PLLKPRNQPLREHTSTY------PNRGRSEFHLVLLCSQHPFGLAPEMDTPTRMSPTWMLWINASVS--NTKCLTFPQCAYSHG----------------
         L   R Q  R H   +      P+  +  F++    +++    A  +     +   W +    S      +C T   C   H                 
Subjt:  PLLKPRNQPLREHTSTY------PNRGRSEFHLVLLCSQHPFGLAPEMDTPTRMSPTWMLWINASVS--NTKCLTFPQCAYSHG----------------

Query:  TMTNSSRAPRHRWTKNKDAELVEPLVSIVHVGGWRSDSGTFRPG
        +MT+SSR P+H WTK ++A LVE    +V+ GGWRSD+GTFRPG
Subjt:  TMTNSSRAPRHRWTKNKDAELVEPLVSIVHVGGWRSDSGTFRPG

KAA0063430.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.4e-3835.42Show/hide
Query:  DPMWKWFQNCLGLLDGTYIKVNVIVLDRPRYRTRKGEIATNVLAISDTKGDFTFVLPGKEGSATNSRVHRDAISRPNGLKVPK-------GSSHY-TEVS
        DP WKWF+NCLG LDGTYIKVNV   D PRYRTRK ++A NVL + +TKGDF FVL G EGS  +SR+ RD ISR NGLKV K       G S+Y  +V 
Subjt:  DPMWKWFQNCLGLLDGTYIKVNVIVLDRPRYRTRKGEIATNVLAISDTKGDFTFVLPGKEGSATNSRVHRDAISRPNGLKVPK-------GSSHY-TEVS

Query:  -------------LGPEEDDAPLLKPRNQPLREHTSTYPNRGRSEFHLVLLCSQHPFGLAPEMDTPTRMSPTW---MLWINASVSNTKCLTFPQCAYSHG
                     +  E  ++ ++      L E  STY   G  +     +C +H      +      +S  W    L     +     L  P  + S  
Subjt:  -------------LGPEEDDAPLLKPRNQPLREHTSTYPNRGRSEFHLVLLCSQHPFGLAPEMDTPTRMSPTW---MLWINASVSNTKCLTFPQCAYSHG

Query:  TMTNSSRAPRHRWTKNKDAELVEPLVSIVHVGGWRSDSGTFRPGRPSENDIPTSPFTMLTANMSEDEPRGTPGSRTCPTRSSSRGSKRKRSGSDMHIAKI
             S  P      N D  L                      G   + DI T        +MS DE  G    +        R    K      ++ + 
Subjt:  TMTNSSRAPRHRWTKNKDAELVEPLVSIVHVGGWRSDSGTFRPGRPSENDIPTSPFTMLTANMSEDEPRGTPGSRTCPTRSSSRGSKRKRSGSDMHIAKI

Query:  AREEMASYTEQLKSIAEWPKEKRATEVNFRDKIVTHLMEVPELENRKRVKLMDILFNNMKTIEGFFSILALLKLEYCEYLLDKH
         R  M    +QLK+IA WPKEKRATEV    ++V  L ++PEL+++ R KLM ILF +++TIEGF SI   LKLEYC  LL  +
Subjt:  AREEMASYTEQLKSIAEWPKEKRATEVNFRDKIVTHLMEVPELENRKRVKLMDILFNNMKTIEGFFSILALLKLEYCEYLLDKH

TYK02751.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]7.3e-3532.99Show/hide
Query:  DPMWKWFQNCLGLLDGTYIKVNVIVLDRPRYRTRKGEIATNVLAISDTKGDFTFVLPGKEGSATNSRVHRDAISRPNGLKVPKGSSHYTEVSLGPEEDDA
        D  W+WF+NCLG LDGTYIKVNV   DR RYRT KGE+ATNVL + DTKGDF +VL G EGSA +SR+  DAISRPNGLKVPKG  +Y  V  G    D 
Subjt:  DPMWKWFQNCLGLLDGTYIKVNVIVLDRPRYRTRKGEIATNVLAISDTKGDFTFVLPGKEGSATNSRVHRDAISRPNGLKVPKGSSHYTEVSLGPEEDDA

Query:  PLLKPRNQPLREHTSTYPNRGRSEFHLVLLCSQHPFGLAPEMDTPTRMSPTWMLWINASVSNTKCLTFPQCAYSHGTMTNSSRAPRHRWTKNKDAELVEP
         L   R Q                +HL                        W    NA          P  +     M +SS     R TK ++A LVE 
Subjt:  PLLKPRNQPLREHTSTYPNRGRSEFHLVLLCSQHPFGLAPEMDTPTRMSPTWMLWINASVSNTKCLTFPQCAYSHGTMTNSSRAPRHRWTKNKDAELVEP

Query:  LVSIVHVGGWRSDSGTFRPGRPSENDIPTSPFTMLTANMSEDEPRGTPGSRTCPTRSSSR--------GSKRKRSGSDMHIAKIAREEMASYTEQLKSIA
        LV +V+ GGWRSD+GTF PG  ++       F +L   + +D  +  P ++    +S           G  R   G     A     ++A Y   +   A
Subjt:  LVSIVHVGGWRSDSGTFRPGRPSENDIPTSPFTMLTANMSEDEPRGTPGSRTCPTRSSSR--------GSKRKRSGSDMHIAKIAREEMASYTEQLKSIA

Query:  E----WPKEKRATEVNFRDKIVTHLMEVPELEN------RKRV----------------KLMDILFNNMKTIEGFFSILALLKLEYCEYLLDKH
              P   +   ++F D + T    V E  N      +KR+                +LM IL  N+  ++ F  +L  +K  YC  +L ++
Subjt:  E----WPKEKRATEVNFRDKIVTHLMEVPELEN------RKRV----------------KLMDILFNNMKTIEGFFSILALLKLEYCEYLLDKH

TrEMBL top hitse value%identityAlignment
A0A5A7SQU2 Putative nuclease HARBI16.9e-4735.11Show/hide
Query:  MDPMWKWFQNCLGLLDGTYIKVNVIVLDRPRYRTRKGEIATNVLAISDTKGDFTFVLPGKEGSATNSRVHRDAISRPNGLKVPKGSSHYTEVSLGPEEDD
        MDP WKWF+NCLG LD TYIKVNV   DRPRY TRKGE+A NVL + DTKGDF FVL G EGSA +SR+ RDAISR NGLKVPKG  +  +      E  
Subjt:  MDPMWKWFQNCLGLLDGTYIKVNVIVLDRPRYRTRKGEIATNVLAISDTKGDFTFVLPGKEGSATNSRVHRDAISRPNGLKVPKGSSHYTEVSLGPEEDD

Query:  APLLKPRNQPLRE--HTSTYPNRGRSEFHLVLLCSQHPFGLAPEMDTPTRMSPTWMLWINASV--SNTKCLTFPQCAYSHG----TMTNSS---------
            +     L E    S  P   R  F++    +++    A  +     +   W +    S    + +C T   C   H      MTNS          
Subjt:  APLLKPRNQPLRE--HTSTYPNRGRSEFHLVLLCSQHPFGLAPEMDTPTRMSPTWMLWINASV--SNTKCLTFPQCAYSHG----TMTNSS---------

Query:  -------------RAPRHRWTKNKDAELVEPLV--------SIVHVGG----WRSDSGTFRP----------GRPSENDIPTSPFTMLTA---NMSEDEP
                         + W++ +D    + L+         + +V G     R+ S TF            G    +D       M+ +   +MS DE 
Subjt:  -------------RAPRHRWTKNKDAELVEPLV--------SIVHVGG----WRSDSGTFRP----------GRPSENDIPTSPFTMLTA---NMSEDEP

Query:  RGTPGSRTCPTRSSSRGSKRKRSGSDMHIAKIAREEMASYTEQLKSIAEWPKEKRATEVNFRDKIVTHLMEVPELENRKRVKLMDILFNNMKTIEGFFSI
         G    +    ++ S GSKRK+        ++ +  +    +QLK+IA WPKEKRATEV  R +++  L ++PEL++R R KL+ ILF +++ IEGF SI
Subjt:  RGTPGSRTCPTRSSSRGSKRKRSGSDMHIAKIAREEMASYTEQLKSIAEWPKEKRATEVNFRDKIVTHLMEVPELENRKRVKLMDILFNNMKTIEGFFSI

Query:  LALLKLEYCEYLL
            KLEYC  LL
Subjt:  LALLKLEYCEYLL

A0A5A7SWD8 Retrotransposon protein4.8e-4043.03Show/hide
Query:  DPMWKWFQNCLGLLDGTYIKVNVIVLDRPRYRTRKGEIATNVLAISDTKGDFTFVLPGKEGSATNSRVHRDAISRPNGLKVPKGSSHYTEVSLGPEEDDA
        D  W+WF+NCLG LDGTYIKVNV   DR RYRTRKGE+ATNVL + DTKGDF +VL G EGSA +SR+ RDA+SRPN LKVPKG  +Y  V  G    + 
Subjt:  DPMWKWFQNCLGLLDGTYIKVNVIVLDRPRYRTRKGEIATNVLAISDTKGDFTFVLPGKEGSATNSRVHRDAISRPNGLKVPKGSSHYTEVSLGPEEDDA

Query:  PLLKPRNQPLREHTSTY------PNRGRSEFHLVLLCSQHPFGLAPEMDTPTRMSPTWMLWINASVS--NTKCLTFPQCAYSHG----------------
         L   R Q  R H   +      P+  +  F++    +++    A  +     +   W +    S      +C T   C   H                 
Subjt:  PLLKPRNQPLREHTSTY------PNRGRSEFHLVLLCSQHPFGLAPEMDTPTRMSPTWMLWINASVS--NTKCLTFPQCAYSHG----------------

Query:  TMTNSSRAPRHRWTKNKDAELVEPLVSIVHVGGWRSDSGTFRPG
        +MT+SSR P+H WTK ++A LVE    +V+ GGWRSD+GTFRPG
Subjt:  TMTNSSRAPRHRWTKNKDAELVEPLVSIVHVGGWRSDSGTFRPG

A0A5A7V8C5 Putative nuclease HARBI16.9e-3935.42Show/hide
Query:  DPMWKWFQNCLGLLDGTYIKVNVIVLDRPRYRTRKGEIATNVLAISDTKGDFTFVLPGKEGSATNSRVHRDAISRPNGLKVPK-------GSSHY-TEVS
        DP WKWF+NCLG LDGTYIKVNV   D PRYRTRK ++A NVL + +TKGDF FVL G EGS  +SR+ RD ISR NGLKV K       G S+Y  +V 
Subjt:  DPMWKWFQNCLGLLDGTYIKVNVIVLDRPRYRTRKGEIATNVLAISDTKGDFTFVLPGKEGSATNSRVHRDAISRPNGLKVPK-------GSSHY-TEVS

Query:  -------------LGPEEDDAPLLKPRNQPLREHTSTYPNRGRSEFHLVLLCSQHPFGLAPEMDTPTRMSPTW---MLWINASVSNTKCLTFPQCAYSHG
                     +  E  ++ ++      L E  STY   G  +     +C +H      +      +S  W    L     +     L  P  + S  
Subjt:  -------------LGPEEDDAPLLKPRNQPLREHTSTYPNRGRSEFHLVLLCSQHPFGLAPEMDTPTRMSPTW---MLWINASVSNTKCLTFPQCAYSHG

Query:  TMTNSSRAPRHRWTKNKDAELVEPLVSIVHVGGWRSDSGTFRPGRPSENDIPTSPFTMLTANMSEDEPRGTPGSRTCPTRSSSRGSKRKRSGSDMHIAKI
             S  P      N D  L                      G   + DI T        +MS DE  G    +        R    K      ++ + 
Subjt:  TMTNSSRAPRHRWTKNKDAELVEPLVSIVHVGGWRSDSGTFRPGRPSENDIPTSPFTMLTANMSEDEPRGTPGSRTCPTRSSSRGSKRKRSGSDMHIAKI

Query:  AREEMASYTEQLKSIAEWPKEKRATEVNFRDKIVTHLMEVPELENRKRVKLMDILFNNMKTIEGFFSILALLKLEYCEYLLDKH
         R  M    +QLK+IA WPKEKRATEV    ++V  L ++PEL+++ R KLM ILF +++TIEGF SI   LKLEYC  LL  +
Subjt:  AREEMASYTEQLKSIAEWPKEKRATEVNFRDKIVTHLMEVPELENRKRVKLMDILFNNMKTIEGFFSILALLKLEYCEYLLDKH

A0A5D3BSN2 Putative nuclease HARBI13.5e-3532.99Show/hide
Query:  DPMWKWFQNCLGLLDGTYIKVNVIVLDRPRYRTRKGEIATNVLAISDTKGDFTFVLPGKEGSATNSRVHRDAISRPNGLKVPKGSSHYTEVSLGPEEDDA
        D  W+WF+NCLG LDGTYIKVNV   DR RYRT KGE+ATNVL + DTKGDF +VL G EGSA +SR+  DAISRPNGLKVPKG  +Y  V  G    D 
Subjt:  DPMWKWFQNCLGLLDGTYIKVNVIVLDRPRYRTRKGEIATNVLAISDTKGDFTFVLPGKEGSATNSRVHRDAISRPNGLKVPKGSSHYTEVSLGPEEDDA

Query:  PLLKPRNQPLREHTSTYPNRGRSEFHLVLLCSQHPFGLAPEMDTPTRMSPTWMLWINASVSNTKCLTFPQCAYSHGTMTNSSRAPRHRWTKNKDAELVEP
         L   R Q                +HL                        W    NA          P  +     M +SS     R TK ++A LVE 
Subjt:  PLLKPRNQPLREHTSTYPNRGRSEFHLVLLCSQHPFGLAPEMDTPTRMSPTWMLWINASVSNTKCLTFPQCAYSHGTMTNSSRAPRHRWTKNKDAELVEP

Query:  LVSIVHVGGWRSDSGTFRPGRPSENDIPTSPFTMLTANMSEDEPRGTPGSRTCPTRSSSR--------GSKRKRSGSDMHIAKIAREEMASYTEQLKSIA
        LV +V+ GGWRSD+GTF PG  ++       F +L   + +D  +  P ++    +S           G  R   G     A     ++A Y   +   A
Subjt:  LVSIVHVGGWRSDSGTFRPGRPSENDIPTSPFTMLTANMSEDEPRGTPGSRTCPTRSSSR--------GSKRKRSGSDMHIAKIAREEMASYTEQLKSIA

Query:  E----WPKEKRATEVNFRDKIVTHLMEVPELEN------RKRV----------------KLMDILFNNMKTIEGFFSILALLKLEYCEYLLDKH
              P   +   ++F D + T    V E  N      +KR+                +LM IL  N+  ++ F  +L  +K  YC  +L ++
Subjt:  E----WPKEKRATEVNFRDKIVTHLMEVPELEN------RKRV----------------KLMDILFNNMKTIEGFFSILALLKLEYCEYLLDKH

E5GCB5 Retrotransposon protein4.6e-4329.43Show/hide
Query:  DPMWKWFQNCLGLLDGTYIKVNVIVLDRPRYRTRKGEIATNVLAISDTKGDFTFVLPGKEGSATNSRVHRDAISRPNGLKVPKGSSHYTEVSLGPEEDDA
        D  W+WF+NCLG LDGTYIKVNV   DR RYRTRKGE+ATNVL + DTKGDF +VL G EGSA +SR+ RDA+SRPN LKVPKG  +Y  V +G    + 
Subjt:  DPMWKWFQNCLGLLDGTYIKVNVIVLDRPRYRTRKGEIATNVLAISDTKGDFTFVLPGKEGSATNSRVHRDAISRPNGLKVPKGSSHYTEVSLGPEEDDA

Query:  PLLKPRNQPLREHTSTY------PNRGRSEFHLVLLCS----QHPFGLAPEMDTPTRMSPTWMLWINASVSNTKCL----------------TFPQCAYS
         L   R Q  R H   +      P+  +  F++    +    +  FG+        R    + + +        CL                   +   +
Subjt:  PLLKPRNQPLREHTSTY------PNRGRSEFHLVLLCS----QHPFGLAPEMDTPTRMSPTWMLWINASVSNTKCL----------------TFPQCAYS

Query:  HGT--------------------------MTNSSRAPRHRWTKNKDAELVEPLVSIVHVGGWRSDSGTFRPGR------------PSEN-----------
        H T                          MT+SSR P+H WTK ++A LVE LV +V+ GGWRSD+GTFRPG             P  N           
Subjt:  HGT--------------------------MTNSSRAPRHRWTKNKDAELVEPLVSIVHVGGWRSDSGTFRPGR------------PSEN-----------

Query:  -----------------------------------------------------------------------------------------------DIPTS
                                                                                                       D    
Subjt:  -----------------------------------------------------------------------------------------------DIPTS

Query:  PFTMLTANMSEDEPRGTPGSRTCPTRSSSRGSKRKRSGSDMHIAKIAREEMASYTEQLKSIAEWPKEKRATEVNFRDKIVTHLMEVPELENRKRVKLMDI
        P      NMS D+   T  +R    R+ S GSKRKR G       I R  +    EQL  IAEWP  +R      R +IV HL  +PEL    R +LM I
Subjt:  PFTMLTANMSEDEPRGTPGSRTCPTRSSSRGSKRKRSGSDMHIAKIAREEMASYTEQLKSIAEWPKEKRATEVNFRDKIVTHLMEVPELENRKRVKLMDI

Query:  LFNNMKTIEGFFSILALLKLEYCEYLLDKH
        L  N+  ++ F  +   +K  YC  +L ++
Subjt:  LFNNMKTIEGFFSILALLKLEYCEYLLDKH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43722.1 unknown protein1.8e-0728.79Show/hide
Query:  WKWFQNCLGLLDGTYIKVNVIVLDRPRYRTRKGEIATNVLAISDTKGDFTFVLPGKEGSATNSRVHRDAISRPNGLKVPKGSSHYTEVSLGPEEDD--AP
        W +F   +G +DGT++ V V    +  Y  R    + N++AI D K  FT++  G  GS  ++ V + A    +   +P    +Y   S  P +    AP
Subjt:  WKWFQNCLGLLDGTYIKVNVIVLDRPRYRTRKGEIATNVLAISDTKGDFTFVLPGKEGSATNSRVHRDAISRPNGLKVPKGSSHYTEVSLGPEEDD--AP

Query:  LLKPRNQPLREHTST--YPNRGRSEFHLVLLC
            RN+ +R H S   Y  R R++  L   C
Subjt:  LLKPRNQPLREHTST--YPNRGRSEFHLVLLC

AT5G28950.1 unknown protein6.0e-1133.62Show/hide
Query:  MWKWFQNCLGLLDGTYIKVNVIVLDRPRYRTRKGEIATNVLAISDTKGDFTFVLPGKEGSATNSRVHRDAISR-PNGLKVPKGSSHYTEVSLGPEEDDAP
        ++ +F++C+G +D T+I   V     P +R RKG+I+ N+LA  +   +F +VL G EGSA +S+V  DA++R  N L VP+      EV     +++  
Subjt:  MWKWFQNCLGLLDGTYIKVNVIVLDRPRYRTRKGEIATNVLAISDTKGDFTFVLPGKEGSATNSRVHRDAISR-PNGLKVPKGSSHYTEVSLGPEEDDAP

Query:  LLKPRNQPLREHTSTY
        +L  ++Q  RE+ + +
Subjt:  LLKPRNQPLREHTSTY

AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)1.1e-0928.29Show/hide
Query:  WFQNCLGLLDGTYIKVNVIVLDRPRYRTRKGEIATNVLAISDTKGDFTFVLPGKEGSATNSRVHRDAISRPNGLKVPKGSSH---------------YTE
        +F++C+G++D  +I V V V ++  +R   G +  NVLA S     F +VL G EGSA++ +V   A++R N L+VP+G  +               Y  
Subjt:  WFQNCLGLLDGTYIKVNVIVLDRPRYRTRKGEIATNVLAISDTKGDFTFVLPGKEGSATNSRVHRDAISRPNGLKVPKGSSH---------------YTE

Query:  VSLGPEEDDAPLLKPRNQPLREHTSTYPNRGRSEFHLVLLCSQHPFGLAPEM
        VS    E+   +   R++ L  H + +   G  +    +L S  P+ L  ++
Subjt:  VSLGPEEDDAPLLKPRNQPLREHTSTYPNRGRSEFHLVLLCSQHPFGLAPEM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCCGATGTGGAAATGGTTTCAGAATTGCCTCGGTCTGTTAGATGGAACATACATCAAGGTCAATGTTATTGTCCTCGATCGTCCGAGGTATAGAACAAGGAAAGG
TGAAATTGCAACGAACGTGCTTGCTATCTCTGATACAAAAGGAGATTTCACATTCGTCCTACCAGGGAAGGAAGGGTCTGCCACTAATTCTCGGGTTCATAGAGATGCAA
TATCACGACCGAACGGACTCAAAGTTCCGAAGGGGTCCAGCCACTATACAGAAGTTTCTCTCGGGCCAGAAGAGGACGACGCGCCTTTGTTGAAGCCCCGGAATCAGCCC
TTAAGGGAACACACATCCACTTACCCCAATCGGGGAAGGAGTGAATTCCATCTTGTACTGTTATGTTCCCAGCATCCATTCGGTCTTGCCCCTGAAATGGATACCCCCAC
TCGCATGTCTCCTACATGGATGCTTTGGATCAATGCATCTGTATCGAATACAAAGTGTTTAACATTTCCACAATGTGCGTATTCACATGGCACAATGACCAATTCGTCTA
GAGCTCCGAGACACAGGTGGACGAAGAACAAGGACGCGGAGCTTGTGGAGCCCCTCGTGTCCATAGTTCATGTGGGCGGTTGGAGGTCCGATAGTGGGACGTTTAGACCT
GGTAGACCTTCAGAGAACGACATTCCCACCTCGCCGTTCACCATGCTTACTGCGAACATGTCAGAGGATGAGCCTCGGGGGACGCCAGGCAGTCGAACTTGCCCAACCAG
AAGTTCGTCACGTGGGAGTAAGAGGAAGAGATCTGGGTCTGACATGCACATTGCAAAAATTGCCAGAGAGGAAATGGCCTCGTATACAGAGCAACTGAAGTCCATTGCAG
AGTGGCCGAAAGAAAAACGTGCCACAGAGGTCAACTTTCGAGATAAAATTGTCACCCACTTGATGGAGGTACCGGAACTGGAGAACCGAAAAAGGGTGAAGCTGATGGAT
ATCCTTTTCAATAACATGAAAACGATAGAGGGCTTCTTCTCCATTCTGGCTCTTCTGAAGTTGGAGTATTGTGAATACCTTTTGGACAAACACAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATCCGATGTGGAAATGGTTTCAGAATTGCCTCGGTCTGTTAGATGGAACATACATCAAGGTCAATGTTATTGTCCTCGATCGTCCGAGGTATAGAACAAGGAAAGG
TGAAATTGCAACGAACGTGCTTGCTATCTCTGATACAAAAGGAGATTTCACATTCGTCCTACCAGGGAAGGAAGGGTCTGCCACTAATTCTCGGGTTCATAGAGATGCAA
TATCACGACCGAACGGACTCAAAGTTCCGAAGGGGTCCAGCCACTATACAGAAGTTTCTCTCGGGCCAGAAGAGGACGACGCGCCTTTGTTGAAGCCCCGGAATCAGCCC
TTAAGGGAACACACATCCACTTACCCCAATCGGGGAAGGAGTGAATTCCATCTTGTACTGTTATGTTCCCAGCATCCATTCGGTCTTGCCCCTGAAATGGATACCCCCAC
TCGCATGTCTCCTACATGGATGCTTTGGATCAATGCATCTGTATCGAATACAAAGTGTTTAACATTTCCACAATGTGCGTATTCACATGGCACAATGACCAATTCGTCTA
GAGCTCCGAGACACAGGTGGACGAAGAACAAGGACGCGGAGCTTGTGGAGCCCCTCGTGTCCATAGTTCATGTGGGCGGTTGGAGGTCCGATAGTGGGACGTTTAGACCT
GGTAGACCTTCAGAGAACGACATTCCCACCTCGCCGTTCACCATGCTTACTGCGAACATGTCAGAGGATGAGCCTCGGGGGACGCCAGGCAGTCGAACTTGCCCAACCAG
AAGTTCGTCACGTGGGAGTAAGAGGAAGAGATCTGGGTCTGACATGCACATTGCAAAAATTGCCAGAGAGGAAATGGCCTCGTATACAGAGCAACTGAAGTCCATTGCAG
AGTGGCCGAAAGAAAAACGTGCCACAGAGGTCAACTTTCGAGATAAAATTGTCACCCACTTGATGGAGGTACCGGAACTGGAGAACCGAAAAAGGGTGAAGCTGATGGAT
ATCCTTTTCAATAACATGAAAACGATAGAGGGCTTCTTCTCCATTCTGGCTCTTCTGAAGTTGGAGTATTGTGAATACCTTTTGGACAAACACAGTTGA
Protein sequenceShow/hide protein sequence
MDPMWKWFQNCLGLLDGTYIKVNVIVLDRPRYRTRKGEIATNVLAISDTKGDFTFVLPGKEGSATNSRVHRDAISRPNGLKVPKGSSHYTEVSLGPEEDDAPLLKPRNQP
LREHTSTYPNRGRSEFHLVLLCSQHPFGLAPEMDTPTRMSPTWMLWINASVSNTKCLTFPQCAYSHGTMTNSSRAPRHRWTKNKDAELVEPLVSIVHVGGWRSDSGTFRP
GRPSENDIPTSPFTMLTANMSEDEPRGTPGSRTCPTRSSSRGSKRKRSGSDMHIAKIAREEMASYTEQLKSIAEWPKEKRATEVNFRDKIVTHLMEVPELENRKRVKLMD
ILFNNMKTIEGFFSILALLKLEYCEYLLDKHS