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Spg011554 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg011554
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold8:16127926..16133565
RNA-Seq ExpressionSpg011554
SyntenySpg011554
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026300.1 uncharacterized protein E6C27_scaffold19G003090 [Cucumis melo var. makuwa]6.6e-2729.97Show/hide
Query:  ERKLNLLMKAFGTLDPVVVRLKKKATMKGSQEKYGSIEDESEGWTLVVRRKRQKQREALEIVTCHIVDVVEDDDDP------------------------
        E+K+ L ++ FGT +P+VV+  ++  +K SQEK  SIE++ EGWT+          E LE+V CH ++  +++  P                        
Subjt:  ERKLNLLMKAFGTLDPVVVRLKKKATMKGSQEKYGSIEDESEGWTLVVRRKRQKQREALEIVTCHIVDVVEDDDDP------------------------

Query:  ----------------ASSSGTVAAVEDVKASDLK-----------------------------------------KGETSISLVKPKVVEDEKCS--PV
                        ASSS  +    +     LK                                         KGE S S  K  ++  EK S  P+
Subjt:  ----------------ASSSGTVAAVEDVKASDLK-----------------------------------------KGETSISLVKPKVVEDEKCS--PV

Query:  LRYVPLSRRKKGESPFTECPK-----------------------------------------------------------------------------SI
        LRYVPLSRRKKGESPF E P+                                                                             SI
Subjt:  LRYVPLSRRKKGESPFTECPK-----------------------------------------------------------------------------SI

Query:  KKKLLKEGYSLPTTRKGLGYKSSEPVRITRKGKAKVADINHITVEEVDDSKEEESVDLRASVFRHIRPPVARASVFQRIIVNETEEE
        +KKLL+EG+ +P +RKGLGYKS E +RITRKGK KV D N+ITVEEVD  +E+E    R S F  IRP VARA VF+R+ + ETE +
Subjt:  KKKLLKEGYSLPTTRKGLGYKSSEPVRITRKGKAKVADINHITVEEVDDSKEEESVDLRASVFRHIRPPVARASVFQRIIVNETEEE

KAA0043405.1 hypothetical protein E6C27_scaffold1639G00040 [Cucumis melo var. makuwa]9.6e-2642.29Show/hide
Query:  KQREALEIVTCHIVDVVEDDDDPASSSGTVAAVEDVKASDLKKGETSISLVKPKVVEDEKCSP--VLRYVPLSRRKKGESPFTECPKSIK----------
        K   + E V   I  V  +D+    S  +    + +     +KGE S S  K  ++ DEK S   +LRYVPLSRR+KGESPF + P+ +K          
Subjt:  KQREALEIVTCHIVDVVEDDDDPASSSGTVAAVEDVKASDLKKGETSISLVKPKVVEDEKCSP--VLRYVPLSRRKKGESPFTECPKSIK----------

Query:  ---KKLLKEGYSLPTTRKGLGYKSSEPVRITRKGKAKVADINHITVEEVDDSKEEESVDLRASVFRHIRPPVARASVFQRIIVNETEEESAQPTNSSTRS
           KKLL+EG+ +P +RKG GYKS EP+ I RK K KV D NHITV EVD  +E+E    R S F  IRP V R +VF+R+ V +TE +  Q T+S  + 
Subjt:  ---KKLLKEGYSLPTTRKGLGYKSSEPVRITRKGKAKVADINHITVEEVDDSKEEESVDLRASVFRHIRPPVARASVFQRIIVNETEEESAQPTNSSTRS

Query:  S
        S
Subjt:  S

KAA0055957.1 uncharacterized protein E6C27_scaffold319G00830 [Cucumis melo var. makuwa]1.1e-2638.2Show/hide
Query:  KQREALEIVTCHIVDVVEDDDDPASSSGTVAAVEDVKASDLKKGETSISLVKPKVVEDEKCS--PVLRYVPLSRRKKGESPFTECPKSIK----------
        K   + E+V+  +  V  +D+    S  +    + +      K E S +  K  ++ DEK S  P+LRYVPLSRRKKGESPF E P+ +K          
Subjt:  KQREALEIVTCHIVDVVEDDDDPASSSGTVAAVEDVKASDLKKGETSISLVKPKVVEDEKCS--PVLRYVPLSRRKKGESPFTECPKSIK----------

Query:  ---------------------------------KKLLKEGYSLPTTRKGLGYKSSEPVRITRKGKAKVADINHITVEEVDDSKEEESVDLRASVFRHIRP
                                         KKLL+EG+ +P +RKGLGYKS EP+RITRKGK KV D NHITV+EVD  +E+E  + R S F  I P
Subjt:  ---------------------------------KKLLKEGYSLPTTRKGLGYKSSEPVRITRKGKAKVADINHITVEEVDDSKEEESVDLRASVFRHIRP

Query:  PVARASVFQRIIVNETEEESAQPTNSSTRSSVF
         VARA VF+R+ + E + +  Q T++  R S F
Subjt:  PVARASVFQRIIVNETEEESAQPTNSSTRSSVF

TYK21493.1 uncharacterized protein E5676_scaffold305G00300 [Cucumis melo var. makuwa]6.6e-2729.97Show/hide
Query:  ERKLNLLMKAFGTLDPVVVRLKKKATMKGSQEKYGSIEDESEGWTLVVRRKRQKQREALEIVTCHIVDVVEDDDDP------------------------
        E+K+ L ++ FGT +P+VV+  ++  +K SQEK  SIE++ EGWT+          E LE+V CH ++  +++  P                        
Subjt:  ERKLNLLMKAFGTLDPVVVRLKKKATMKGSQEKYGSIEDESEGWTLVVRRKRQKQREALEIVTCHIVDVVEDDDDP------------------------

Query:  ----------------ASSSGTVAAVEDVKASDLK-----------------------------------------KGETSISLVKPKVVEDEKCS--PV
                        ASSS  +    +     LK                                         KGE S S  K  ++  EK S  P+
Subjt:  ----------------ASSSGTVAAVEDVKASDLK-----------------------------------------KGETSISLVKPKVVEDEKCS--PV

Query:  LRYVPLSRRKKGESPFTECPK-----------------------------------------------------------------------------SI
        LRYVPLSRRKKGESPF E P+                                                                             SI
Subjt:  LRYVPLSRRKKGESPFTECPK-----------------------------------------------------------------------------SI

Query:  KKKLLKEGYSLPTTRKGLGYKSSEPVRITRKGKAKVADINHITVEEVDDSKEEESVDLRASVFRHIRPPVARASVFQRIIVNETEEE
        +KKLL+EG+ +P +RKGLGYKS E +RITRKGK KV D N+ITVEEVD  +E+E    R S F  IRP VARA VF+R+ + ETE +
Subjt:  KKKLLKEGYSLPTTRKGLGYKSSEPVRITRKGKAKVADINHITVEEVDDSKEEESVDLRASVFRHIRPPVARASVFQRIIVNETEEE

XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]1.2e-2535.21Show/hide
Query:  KQREALEIVTCHIVDVVEDDDDPASSSGTVAAVEDVKASDLKKGETSISLVKPKVVEDEKC--SPVLRYVPLSRRKKGESPFTECPKSIK----------
        K    LE++         +D+    S  T    E  +  +  KGE   S  K  +++DE    +PVLRYVPLSRRKKGESPF E PK +K          
Subjt:  KQREALEIVTCHIVDVVEDDDDPASSSGTVAAVEDVKASDLKKGETSISLVKPKVVEDEKC--SPVLRYVPLSRRKKGESPFTECPKSIK----------

Query:  -------------------------------------------------------------------KKLLKEGYSLPTTRKGLGYKSSEPVRITRKGKA
                                                                           KKLL+EG+S+P +RKGLGYKS EP+RIT+KGK 
Subjt:  -------------------------------------------------------------------KKLLKEGYSLPTTRKGLGYKSSEPVRITRKGKA

Query:  KVADINHITVEEVDDSKEEESVDLRASVFRHIRPPVARASVFQRIIVNETEEESAQPTNSSTRSSVF
        KV DINHIT+EE D++  +E  + R SVF  IRP VAR  VF+R+ + E E E  Q   S  R SVF
Subjt:  KVADINHITVEEVDDSKEEESVDLRASVFRHIRPPVARASVFQRIIVNETEEESAQPTNSSTRSSVF

XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]9.9e-0733.59Show/hide
Query:  AFACWISKLIEESSKDKVAVKDNPLFESVIPTSKQPKDTLNPDVMSVMMSDVDQDERMAEMERKLNLLMKAFGTLDPVVVRLKK----KATMKGSQEKYG
        A A  I K + ES K  + +K+NPL+      S +     +PDVMSVMM+DV  +  MAEMERK+NLLMK     D  +  LK+    + T + SQ    
Subjt:  AFACWISKLIEESSKDKVAVKDNPLFESVIPTSKQPKDTLNPDVMSVMMSDVDQDERMAEMERKLNLLMKAFGTLDPVVVRLKK----KATMKGSQEKYG

Query:  SIEDESEGWTLVVRRKRQKQREALEIVTCHI
         ++D+ +     V ++ Q Q+++  + +  +
Subjt:  SIEDESEGWTLVVRRKRQKQREALEIVTCHI

TrEMBL top hitse value%identityAlignment
A0A5A7SJC0 Ribonuclease H3.2e-2729.97Show/hide
Query:  ERKLNLLMKAFGTLDPVVVRLKKKATMKGSQEKYGSIEDESEGWTLVVRRKRQKQREALEIVTCHIVDVVEDDDDP------------------------
        E+K+ L ++ FGT +P+VV+  ++  +K SQEK  SIE++ EGWT+          E LE+V CH ++  +++  P                        
Subjt:  ERKLNLLMKAFGTLDPVVVRLKKKATMKGSQEKYGSIEDESEGWTLVVRRKRQKQREALEIVTCHIVDVVEDDDDP------------------------

Query:  ----------------ASSSGTVAAVEDVKASDLK-----------------------------------------KGETSISLVKPKVVEDEKCS--PV
                        ASSS  +    +     LK                                         KGE S S  K  ++  EK S  P+
Subjt:  ----------------ASSSGTVAAVEDVKASDLK-----------------------------------------KGETSISLVKPKVVEDEKCS--PV

Query:  LRYVPLSRRKKGESPFTECPK-----------------------------------------------------------------------------SI
        LRYVPLSRRKKGESPF E P+                                                                             SI
Subjt:  LRYVPLSRRKKGESPFTECPK-----------------------------------------------------------------------------SI

Query:  KKKLLKEGYSLPTTRKGLGYKSSEPVRITRKGKAKVADINHITVEEVDDSKEEESVDLRASVFRHIRPPVARASVFQRIIVNETEEE
        +KKLL+EG+ +P +RKGLGYKS E +RITRKGK KV D N+ITVEEVD  +E+E    R S F  IRP VARA VF+R+ + ETE +
Subjt:  KKKLLKEGYSLPTTRKGLGYKSSEPVRITRKGKAKVADINHITVEEVDDSKEEESVDLRASVFRHIRPPVARASVFQRIIVNETEEE

A0A5A7TPR5 RNase H domain-containing protein4.6e-2642.29Show/hide
Query:  KQREALEIVTCHIVDVVEDDDDPASSSGTVAAVEDVKASDLKKGETSISLVKPKVVEDEKCSP--VLRYVPLSRRKKGESPFTECPKSIK----------
        K   + E V   I  V  +D+    S  +    + +     +KGE S S  K  ++ DEK S   +LRYVPLSRR+KGESPF + P+ +K          
Subjt:  KQREALEIVTCHIVDVVEDDDDPASSSGTVAAVEDVKASDLKKGETSISLVKPKVVEDEKCSP--VLRYVPLSRRKKGESPFTECPKSIK----------

Query:  ---KKLLKEGYSLPTTRKGLGYKSSEPVRITRKGKAKVADINHITVEEVDDSKEEESVDLRASVFRHIRPPVARASVFQRIIVNETEEESAQPTNSSTRS
           KKLL+EG+ +P +RKG GYKS EP+ I RK K KV D NHITV EVD  +E+E    R S F  IRP V R +VF+R+ V +TE +  Q T+S  + 
Subjt:  ---KKLLKEGYSLPTTRKGLGYKSSEPVRITRKGKAKVADINHITVEEVDDSKEEESVDLRASVFRHIRPPVARASVFQRIIVNETEEESAQPTNSSTRS

Query:  S
        S
Subjt:  S

A0A5A7UMY2 Reverse transcriptase domain-containing protein5.5e-2738.2Show/hide
Query:  KQREALEIVTCHIVDVVEDDDDPASSSGTVAAVEDVKASDLKKGETSISLVKPKVVEDEKCS--PVLRYVPLSRRKKGESPFTECPKSIK----------
        K   + E+V+  +  V  +D+    S  +    + +      K E S +  K  ++ DEK S  P+LRYVPLSRRKKGESPF E P+ +K          
Subjt:  KQREALEIVTCHIVDVVEDDDDPASSSGTVAAVEDVKASDLKKGETSISLVKPKVVEDEKCS--PVLRYVPLSRRKKGESPFTECPKSIK----------

Query:  ---------------------------------KKLLKEGYSLPTTRKGLGYKSSEPVRITRKGKAKVADINHITVEEVDDSKEEESVDLRASVFRHIRP
                                         KKLL+EG+ +P +RKGLGYKS EP+RITRKGK KV D NHITV+EVD  +E+E  + R S F  I P
Subjt:  ---------------------------------KKLLKEGYSLPTTRKGLGYKSSEPVRITRKGKAKVADINHITVEEVDDSKEEESVDLRASVFRHIRP

Query:  PVARASVFQRIIVNETEEESAQPTNSSTRSSVF
         VARA VF+R+ + E + +  Q T++  R S F
Subjt:  PVARASVFQRIIVNETEEESAQPTNSSTRSSVF

A0A5D3DD54 Ribonuclease H3.2e-2729.97Show/hide
Query:  ERKLNLLMKAFGTLDPVVVRLKKKATMKGSQEKYGSIEDESEGWTLVVRRKRQKQREALEIVTCHIVDVVEDDDDP------------------------
        E+K+ L ++ FGT +P+VV+  ++  +K SQEK  SIE++ EGWT+          E LE+V CH ++  +++  P                        
Subjt:  ERKLNLLMKAFGTLDPVVVRLKKKATMKGSQEKYGSIEDESEGWTLVVRRKRQKQREALEIVTCHIVDVVEDDDDP------------------------

Query:  ----------------ASSSGTVAAVEDVKASDLK-----------------------------------------KGETSISLVKPKVVEDEKCS--PV
                        ASSS  +    +     LK                                         KGE S S  K  ++  EK S  P+
Subjt:  ----------------ASSSGTVAAVEDVKASDLK-----------------------------------------KGETSISLVKPKVVEDEKCS--PV

Query:  LRYVPLSRRKKGESPFTECPK-----------------------------------------------------------------------------SI
        LRYVPLSRRKKGESPF E P+                                                                             SI
Subjt:  LRYVPLSRRKKGESPFTECPK-----------------------------------------------------------------------------SI

Query:  KKKLLKEGYSLPTTRKGLGYKSSEPVRITRKGKAKVADINHITVEEVDDSKEEESVDLRASVFRHIRPPVARASVFQRIIVNETEEE
        +KKLL+EG+ +P +RKGLGYKS E +RITRKGK KV D N+ITVEEVD  +E+E    R S F  IRP VARA VF+R+ + ETE +
Subjt:  KKKLLKEGYSLPTTRKGLGYKSSEPVRITRKGKAKVADINHITVEEVDDSKEEESVDLRASVFRHIRPPVARASVFQRIIVNETEEE

A0A5D3DXC7 Reverse transcriptase domain-containing protein6.1e-2636.63Show/hide
Query:  KQREALEIVTCHIVDVVEDDDDPASSSGTVAAVEDVKASDLKKGETSISLVKPKVVEDEKCS--PVLRYVPLSRRKKGESPFTECPKSIK----------
        K   + E+V+  +  V  +D+    S  +    + +      K E S +  K  ++ DEK S  P+LRYVPLSRRKKGESPF E P+ +K          
Subjt:  KQREALEIVTCHIVDVVEDDDDPASSSGTVAAVEDVKASDLKKGETSISLVKPKVVEDEKCS--PVLRYVPLSRRKKGESPFTECPKSIK----------

Query:  -------------------------------------------KKLLKEGYSLPTTRKGLGYKSSEPVRITRKGKAKVADINHITVEEVDDSKEEESVDL
                                                   KKLL+EG+ +P +RKGLGYKS EP+RITRKGK KV D NHITV+EVD  +E+E  + 
Subjt:  -------------------------------------------KKLLKEGYSLPTTRKGLGYKSSEPVRITRKGKAKVADINHITVEEVDDSKEEESVDL

Query:  RASVFRHIRPPVARASVFQRIIVNETEEESAQPTNSSTRSSVF
        R S F  I P VARA VF+R+ + E E +  Q T++  + S F
Subjt:  RASVFRHIRPPVARASVFQRIIVNETEEESAQPTNSSTRSSVF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGATGGCTGGATCTTGCAAATGAAAGAAGGATTCAGAGTCATGGACTGGAAAGCGGCAGCTTTCGCCATCGCTTTTGCTTGCTGGATCTCAAAGTTGATTGAAGA
ATCCTCTAAGGATAAGGTTGCAGTCAAAGATAACCCGCTGTTCGAATCTGTCATTCCAACATCTAAACAGCCAAAGGATACACTAAATCCTGATGTGATGTCCGTCATGA
TGTCTGATGTAGACCAGGATGAAAGAATGGCAGAGATGGAAAGAAAACTCAATCTCTTAATGAAGGCATTTGGCACCCTTGATCCTGTAGTGGTTCGTTTAAAAAAAAAA
GCCACAATGAAGGGATCCCAAGAAAAATATGGTTCCATCGAAGATGAGAGCGAAGGTTGGACCCTTGTCGTTCGTCGCAAAAGGCAAAAGCAAAGAGAAGCACTTGAAAT
CGTCACGTGTCACATTGTGGACGTGGTGGAAGATGATGATGACCCTGCTAGTTCCTCGGGAACGGTGGCAGCTGTTGAGGATGTGAAGGCATCTGACCTGAAAAAGGGTG
AAACATCTATAAGCCTTGTGAAACCTAAAGTTGTAGAGGATGAGAAATGTTCACCTGTCCTACGATACGTCCCTTTATCTAGGCGTAAAAAGGGTGAATCACCTTTCACT
GAATGTCCGAAAAGCATAAAGAAGAAGCTTCTAAAGGAAGGCTATAGTCTGCCTACGACGAGAAAAGGACTTGGATATAAGTCGTCCGAGCCAGTTCGCATAACAAGAAA
AGGGAAGGCGAAAGTGGCAGACATAAATCATATAACAGTAGAGGAGGTTGATGACTCAAAAGAAGAAGAGAGCGTCGATCTTCGAGCTTCTGTTTTTAGGCACATCAGGC
CACCAGTTGCTCGTGCTTCAGTCTTTCAGAGGATAATTGTGAATGAAACAGAGGAAGAAAGTGCACAACCTACCAATAGCTCCACTCGATCTTCAGTTTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTGATGGCTGGATCTTGCAAATGAAAGAAGGATTCAGAGTCATGGACTGGAAAGCGGCAGCTTTCGCCATCGCTTTTGCTTGCTGGATCTCAAAGTTGATTGAAGA
ATCCTCTAAGGATAAGGTTGCAGTCAAAGATAACCCGCTGTTCGAATCTGTCATTCCAACATCTAAACAGCCAAAGGATACACTAAATCCTGATGTGATGTCCGTCATGA
TGTCTGATGTAGACCAGGATGAAAGAATGGCAGAGATGGAAAGAAAACTCAATCTCTTAATGAAGGCATTTGGCACCCTTGATCCTGTAGTGGTTCGTTTAAAAAAAAAA
GCCACAATGAAGGGATCCCAAGAAAAATATGGTTCCATCGAAGATGAGAGCGAAGGTTGGACCCTTGTCGTTCGTCGCAAAAGGCAAAAGCAAAGAGAAGCACTTGAAAT
CGTCACGTGTCACATTGTGGACGTGGTGGAAGATGATGATGACCCTGCTAGTTCCTCGGGAACGGTGGCAGCTGTTGAGGATGTGAAGGCATCTGACCTGAAAAAGGGTG
AAACATCTATAAGCCTTGTGAAACCTAAAGTTGTAGAGGATGAGAAATGTTCACCTGTCCTACGATACGTCCCTTTATCTAGGCGTAAAAAGGGTGAATCACCTTTCACT
GAATGTCCGAAAAGCATAAAGAAGAAGCTTCTAAAGGAAGGCTATAGTCTGCCTACGACGAGAAAAGGACTTGGATATAAGTCGTCCGAGCCAGTTCGCATAACAAGAAA
AGGGAAGGCGAAAGTGGCAGACATAAATCATATAACAGTAGAGGAGGTTGATGACTCAAAAGAAGAAGAGAGCGTCGATCTTCGAGCTTCTGTTTTTAGGCACATCAGGC
CACCAGTTGCTCGTGCTTCAGTCTTTCAGAGGATAATTGTGAATGAAACAGAGGAAGAAAGTGCACAACCTACCAATAGCTCCACTCGATCTTCAGTTTTTTGA
Protein sequenceShow/hide protein sequence
MCDGWILQMKEGFRVMDWKAAAFAIAFACWISKLIEESSKDKVAVKDNPLFESVIPTSKQPKDTLNPDVMSVMMSDVDQDERMAEMERKLNLLMKAFGTLDPVVVRLKKK
ATMKGSQEKYGSIEDESEGWTLVVRRKRQKQREALEIVTCHIVDVVEDDDDPASSSGTVAAVEDVKASDLKKGETSISLVKPKVVEDEKCSPVLRYVPLSRRKKGESPFT
ECPKSIKKKLLKEGYSLPTTRKGLGYKSSEPVRITRKGKAKVADINHITVEEVDDSKEEESVDLRASVFRHIRPPVARASVFQRIIVNETEEESAQPTNSSTRSSVF