; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg011563 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg011563
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionupstream activation factor subunit UAF30-like
Genome locationscaffold8:12867660..12872318
RNA-Seq ExpressionSpg011563
SyntenySpg011563
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsIPR003121 - SWIB/MDM2 domain
IPR019835 - SWIB domain
IPR036885 - SWIB/MDM2 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011165.1 UAF30 [Cucurbita argyrosperma subsp. argyrosperma]3.3e-4492.93Show/hide
Query:  NSDDSAKEEKRQKKGKSGFLAPLQLSDALVAFLGTGENALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFHGFTVSKLLATHFVKTK
        +SDDSA+EEKRQKKGKSGFLAPLQLSDALV FLGTGE+AL RSDVVKRMWDYIKQNNLQDPSDKRR+ICDEKLKELFDV+SFHGFTVSKLLATHFVKTK
Subjt:  NSDDSAKEEKRQKKGKSGFLAPLQLSDALVAFLGTGENALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFHGFTVSKLLATHFVKTK

XP_022928098.1 upstream activation factor subunit UAF30-like [Cucurbita moschata]3.3e-4492.93Show/hide
Query:  NSDDSAKEEKRQKKGKSGFLAPLQLSDALVAFLGTGENALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFHGFTVSKLLATHFVKTK
        +SDDSA+EEKRQKKGKSGFLAPLQLSDALV FLGTGE+AL RSDVVKRMWDYIKQNNLQDPSDKRR+ICDEKLKELFDV+SFHGFTVSKLLATHFVKTK
Subjt:  NSDDSAKEEKRQKKGKSGFLAPLQLSDALVAFLGTGENALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFHGFTVSKLLATHFVKTK

XP_022971720.1 upstream activation factor subunit spp27-like [Cucurbita maxima]6.6e-4593.94Show/hide
Query:  NSDDSAKEEKRQKKGKSGFLAPLQLSDALVAFLGTGENALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFHGFTVSKLLATHFVKTK
        +SDDSA+EEKRQKKGKSGFLAPLQLSDALV FLGTGEN+L RSDVVKRMWDYIKQNNLQDPSDKRR+ICDEKLKELFDVDSFHGFTVSKLLATHFVKTK
Subjt:  NSDDSAKEEKRQKKGKSGFLAPLQLSDALVAFLGTGENALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFHGFTVSKLLATHFVKTK

XP_023512445.1 upstream activation factor subunit spp27-like [Cucurbita pepo subsp. pepo]3.3e-4492.93Show/hide
Query:  NSDDSAKEEKRQKKGKSGFLAPLQLSDALVAFLGTGENALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFHGFTVSKLLATHFVKTK
        +SDDSA+EEKRQKKGKSGFLAPLQLSDALV FLGTGE+AL RSDVVKRMWDYIKQNNLQDPSDKRR+ICDEKLKELFDV+SFHGFTVSKLLATHFVKTK
Subjt:  NSDDSAKEEKRQKKGKSGFLAPLQLSDALVAFLGTGENALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFHGFTVSKLLATHFVKTK

XP_038901460.1 upstream activation factor subunit spp27-like isoform X1 [Benincasa hispida]3.0e-4593.94Show/hide
Query:  NSDDSAKEEKRQKKGKSGFLAPLQLSDALVAFLGTGENALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFHGFTVSKLLATHFVKTK
        +SDDSA+EEKRQKKGKSGFLAPLQLSDALV FLGTGE+ALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDE+LKELFDVDSFHGFTVSKLLATHF+KTK
Subjt:  NSDDSAKEEKRQKKGKSGFLAPLQLSDALVAFLGTGENALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFHGFTVSKLLATHFVKTK

TrEMBL top hitse value%identityAlignment
A0A0A0LJW7 Uncharacterized protein6.6e-4389.9Show/hide
Query:  NSDDSAKEEKRQKKGKSGFLAPLQLSDALVAFLGTGENALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFHGFTVSKLLATHFVKTK
        +SDDSA+E+KRQKKGKSGFLAPL LS+ALVAFLGTGE+ALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDE+LKELFDVDSF+GFTVSKLLATHF+K K
Subjt:  NSDDSAKEEKRQKKGKSGFLAPLQLSDALVAFLGTGENALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFHGFTVSKLLATHFVKTK

A0A1S3C766 upstream activation factor subunit UAF30-like1.7e-4390.91Show/hide
Query:  NSDDSAKEEKRQKKGKSGFLAPLQLSDALVAFLGTGENALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFHGFTVSKLLATHFVKTK
        +SDDSA+E+KRQKKGKSGFLAPL LSDALVAFLGTGE+ALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDE+LKELFDVDSF+GFTVSKLLATHF+K K
Subjt:  NSDDSAKEEKRQKKGKSGFLAPLQLSDALVAFLGTGENALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFHGFTVSKLLATHFVKTK

A0A6J1EMX5 upstream activation factor subunit UAF30-like1.6e-4492.93Show/hide
Query:  NSDDSAKEEKRQKKGKSGFLAPLQLSDALVAFLGTGENALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFHGFTVSKLLATHFVKTK
        +SDDSA+EEKRQKKGKSGFLAPLQLSDALV FLGTGE+AL RSDVVKRMWDYIKQNNLQDPSDKRR+ICDEKLKELFDV+SFHGFTVSKLLATHFVKTK
Subjt:  NSDDSAKEEKRQKKGKSGFLAPLQLSDALVAFLGTGENALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFHGFTVSKLLATHFVKTK

A0A6J1G661 upstream activation factor subunit UAF30-like isoform X21.6e-4188.12Show/hide
Query:  QDPGNSDDSAKEEKRQKKGKSGFLAPLQLSDALVAFLGTGENALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFHGFTVSKLLATHFV
        Q   +SDDS +E KRQKKGKSGFLAPLQLSDALV FLGTGENAL RS+VVKRMWDY+KQNNLQDPSDKRRIICDEKLKELFDVDSF+GFTVSKLLATHFV
Subjt:  QDPGNSDDSAKEEKRQKKGKSGFLAPLQLSDALVAFLGTGENALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFHGFTVSKLLATHFV

Query:  K
        K
Subjt:  K

A0A6J1I6I7 upstream activation factor subunit spp27-like3.2e-4593.94Show/hide
Query:  NSDDSAKEEKRQKKGKSGFLAPLQLSDALVAFLGTGENALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFHGFTVSKLLATHFVKTK
        +SDDSA+EEKRQKKGKSGFLAPLQLSDALV FLGTGEN+L RSDVVKRMWDYIKQNNLQDPSDKRR+ICDEKLKELFDVDSFHGFTVSKLLATHFVKTK
Subjt:  NSDDSAKEEKRQKKGKSGFLAPLQLSDALVAFLGTGENALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFHGFTVSKLLATHFVKTK

SwissProt top hitse value%identityAlignment
O74503 Upstream activation factor subunit spp274.3e-1540.21Show/hide
Query:  NSDDSAKEEKRQKKGKSGFLAPLQLSDALVAFLGTGENALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFHGFTVSKLLATHFVK
        + ++  K ++ Q    +    P++LS  L  FLG  +  L R   VK++W+YIK ++LQDP+DKR I+CD+KLK +F+VD+ H FT++K L     K
Subjt:  NSDDSAKEEKRQKKGKSGFLAPLQLSDALVAFLGTGENALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFHGFTVSKLLATHFVK

Q05024 Protein TRI12.5e-1038.78Show/hide
Query:  GNSDDSAKEEKRQK---KGKSGFLAPLQLSDALVAFLGTGENALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFHGFTVSKLLATH
        G S+  +K +K++       S  +  + LS  L  FLG+ E  LPR+ VVK +W YIK+++LQ+P D+R I+CDEK++ +F       F+++KLL  H
Subjt:  GNSDDSAKEEKRQK---KGKSGFLAPLQLSDALVAFLGTGENALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFHGFTVSKLLATH

Q08747 Upstream activation factor subunit UAF303.2e-1033.33Show/hide
Query:  EDASEVLIFAQDPGNSDDSAKEEKRQKKGKSGFLA-------PLQLSDALVAFLGTGENALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDV
        E   E+ +  +  G   + ++ +    + K G ++        + LS +L + L  GE+ L R++VV+R+W YIK +NLQ+P++K+ I+CDEKL EL   
Subjt:  EDASEVLIFAQDPGNSDDSAKEEKRQKKGKSGFLA-------PLQLSDALVAFLGTGENALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDV

Query:  DSFHGFTVSKLLATHFVKTK
         S + F + K+LA+H  + K
Subjt:  DSFHGFTVSKLLATHFVKTK

Q9P7S3 SWI/SNF and RSC complexes subunit ssr31.4e-0538.24Show/hide
Query:  QLSDALVAFLGTGENALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFHGFTVSKLL
        +LS A    LG  E   P  D+V  +W YIK + LQD  +KR I CD+ L++LF+ D  +   + +L+
Subjt:  QLSDALVAFLGTGENALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFHGFTVSKLL

Q9SD34 Zinc finger CCCH domain-containing protein 444.1e-0537.88Show/hide
Query:  VAFLGTGE-NALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFHGFTVSKLLATH
        V+F+  G+ + L + DV   + DYIK+ NL+DP  K +++CD+ L +LF       F + KLL +H
Subjt:  VAFLGTGE-NALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFHGFTVSKLLATH

Arabidopsis top hitse value%identityAlignment
AT1G49520.1 SWIB complex BAF60b domain-containing protein6.6e-1953.93Show/hide
Query:  AKEEKRQKKGKSGFLAPLQLSDALVAFLGTGENALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFHGFTVSKLLATH
        AK E++ KK   GF     LS  L AF GT +  L R++VVK +W YIK+NNLQDPSDKR IICDE L+ LF V+S + F ++K LA H
Subjt:  AKEEKRQKKGKSGFLAPLQLSDALVAFLGTGENALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFHGFTVSKLLATH

AT2G35605.1 SWIB/MDM2 domain superfamily protein1.9e-1345.78Show/hide
Query:  SGFLAPLQLSDALVAFLGTGENALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFHGF-TVSKLLATHFVKT
        +G L  + +S  L  F+  GEN + R+  VK++W+YIK NNLQ+P +KR I+CDE+LK +F      GF  +SKLL+ HF K+
Subjt:  SGFLAPLQLSDALVAFLGTGENALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFHGF-TVSKLLATHFVKT

AT3G03590.1 SWIB/MDM2 domain superfamily protein4.4e-1545.92Show/hide
Query:  SDDSAKEEKRQKKGKSGFLAPLQLSDALVAFLGTGENALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFHGF-TVSKLLATHFVKT
        SD  AK+  R     +G      +S  L  FLGTGE +  R+D +K +W YIK ++LQ+P+DKR I CDE LK +F+     GF  +SKLL+ HFVKT
Subjt:  SDDSAKEEKRQKKGKSGFLAPLQLSDALVAFLGTGENALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFHGF-TVSKLLATHFVKT

AT3G19080.1 SWIB complex BAF60b domain-containing protein4.4e-3165.62Show/hide
Query:  DSAKEEKRQKKGKSGFLAPLQLSDALVAFLGTGENALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFHGFTVSKLLATHFVKTK
        DS +  ++ KK K   LAPL LSDALV FLG GEN+L R+DVVKR+W+YI  N+LQDPSDKRR+ICDEKLKELF+VDSF   +VSKLL  HF+K +
Subjt:  DSAKEEKRQKKGKSGFLAPLQLSDALVAFLGTGENALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFHGFTVSKLLATHFVKTK

AT4G22360.1 SWIB complex BAF60b domain-containing protein4.4e-1541.94Show/hide
Query:  DSAKEEKRQKKGKSGFLAPLQLSDALVAFLGTGENALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFHGFTVSKLLATHFV
        +SA    ++K G  G     ++S  L   +  GE ALPR+++V+++W YI++NNLQDPS+KR+IICD+ L+ +F+ D    F ++KLLA H +
Subjt:  DSAKEEKRQKKGKSGFLAPLQLSDALVAFLGTGENALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFHGFTVSKLLATHFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGACAGCAAAAGCCTGCCAAACCAGGGGAGCAATTGGCCCTTCTTTTGTTATTGTCTTTGCCACCAGGAGGATGCAAGTGAGGTACTGATTTTTGCACAAGATCC
AGGAAATTCAGATGACTCTGCAAAAGAGGAAAAGCGGCAAAAGAAAGGGAAATCTGGTTTTCTTGCTCCACTTCAACTTTCGGATGCTCTGGTGGCATTTCTTGGTACTG
GAGAGAATGCATTGCCTCGCTCTGATGTAGTGAAAAGAATGTGGGATTACATAAAGCAAAACAACCTTCAGGACCCTTCTGACAAAAGGAGAATAATCTGTGACGAGAAG
CTAAAAGAACTCTTCGATGTTGATTCCTTTCACGGCTTCACCGTTTCGAAACTTCTGGCCACTCATTTTGTAAAGACAAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGACAGCAAAAGCCTGCCAAACCAGGGGAGCAATTGGCCCTTCTTTTGTTATTGTCTTTGCCACCAGGAGGATGCAAGTGAGGTACTGATTTTTGCACAAGATCC
AGGAAATTCAGATGACTCTGCAAAAGAGGAAAAGCGGCAAAAGAAAGGGAAATCTGGTTTTCTTGCTCCACTTCAACTTTCGGATGCTCTGGTGGCATTTCTTGGTACTG
GAGAGAATGCATTGCCTCGCTCTGATGTAGTGAAAAGAATGTGGGATTACATAAAGCAAAACAACCTTCAGGACCCTTCTGACAAAAGGAGAATAATCTGTGACGAGAAG
CTAAAAGAACTCTTCGATGTTGATTCCTTTCACGGCTTCACCGTTTCGAAACTTCTGGCCACTCATTTTGTAAAGACAAAATAG
Protein sequenceShow/hide protein sequence
MKDSKSLPNQGSNWPFFCYCLCHQEDASEVLIFAQDPGNSDDSAKEEKRQKKGKSGFLAPLQLSDALVAFLGTGENALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDEK
LKELFDVDSFHGFTVSKLLATHFVKTK