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Spg011573 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg011573
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold8:13571064..13572260
RNA-Seq ExpressionSpg011573
SyntenySpg011573
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038902322.1 protein PXR1-like [Benincasa hispida]3.4e-0426.59Show/hide
Query:  SSGEKRDKEEEKEDDEADTSTNSDTEFDSEIRELDGHQVPISASLRRKRKR------------EIKAERRTKNKNDPIFAKRKEISSMKKDSLTEQEHCQ
        +  EK +K+ EK+ +EA+         D + ++  G +     S R ++ R            E+K ER+ K K +      +++   +K  L E+E   
Subjt:  SSGEKRDKEEEKEDDEADTSTNSDTEFDSEIRELDGHQVPISASLRRKRKR------------EIKAERRTKNKNDPIFAKRKEISSMKKDSLTEQEHCQ

Query:  IREFYAGLREESISMAVVRGKMVSFSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMKDALKLVANKGVQWKES
        +R+FY G   E+      +G+ V FS+ DIN +Y++K  L+  GN ++ +P+ + M DAL+++     +W  S
Subjt:  IREFYAGLREESISMAVVRGKMVSFSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMKDALKLVANKGVQWKES
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGCTAAAGAGGTTTTTGAGCTTCTGTCCACGAATGACCCACCAACTGCTGATAGCACCTCTTCGGGAGAGAAGAGGGATAAAGAAGAGGAAAAAGAAGATGACGA
GGCCGATACCTCCACTAACTCTGATACAGAATTCGATTCAGAGATAAGGGAACTAGATGGCCATCAAGTCCCTATCTCTGCATCATTGAGAAGAAAAAGGAAGAGAGAGA
TCAAGGCTGAGAGGAGGACAAAGAACAAGAACGATCCAATCTTTGCCAAGAGAAAAGAGATTTCCTCAATGAAAAAGGATTCTCTAACAGAGCAGGAGCACTGCCAGATT
CGTGAATTTTACGCCGGCCTGAGGGAGGAGAGTATTAGCATGGCAGTGGTGAGGGGTAAGATGGTCAGCTTCTCTTCTGTAGACATTAACAGGGTGTACAGGATTAAGGC
ACCCCTGAATCCGAGAGGGAATGATGTGATAAGGAACCCTTCGGCCAAGCAAATGAAAGATGCATTGAAACTTGTGGCCAATAAGGGGGTTCAATGGAAAGAGTCATAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTGCTAAAGAGGTTTTTGAGCTTCTGTCCACGAATGACCCACCAACTGCTGATAGCACCTCTTCGGGAGAGAAGAGGGATAAAGAAGAGGAAAAAGAAGATGACGA
GGCCGATACCTCCACTAACTCTGATACAGAATTCGATTCAGAGATAAGGGAACTAGATGGCCATCAAGTCCCTATCTCTGCATCATTGAGAAGAAAAAGGAAGAGAGAGA
TCAAGGCTGAGAGGAGGACAAAGAACAAGAACGATCCAATCTTTGCCAAGAGAAAAGAGATTTCCTCAATGAAAAAGGATTCTCTAACAGAGCAGGAGCACTGCCAGATT
CGTGAATTTTACGCCGGCCTGAGGGAGGAGAGTATTAGCATGGCAGTGGTGAGGGGTAAGATGGTCAGCTTCTCTTCTGTAGACATTAACAGGGTGTACAGGATTAAGGC
ACCCCTGAATCCGAGAGGGAATGATGTGATAAGGAACCCTTCGGCCAAGCAAATGAAAGATGCATTGAAACTTGTGGCCAATAAGGGGGTTCAATGGAAAGAGTCATAG
Protein sequenceShow/hide protein sequence
MPAKEVFELLSTNDPPTADSTSSGEKRDKEEEKEDDEADTSTNSDTEFDSEIRELDGHQVPISASLRRKRKREIKAERRTKNKNDPIFAKRKEISSMKKDSLTEQEHCQI
REFYAGLREESISMAVVRGKMVSFSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMKDALKLVANKGVQWKES