; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg011586 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg011586
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionsplicing factor U2af small subunit B-like
Genome locationscaffold8:14283220..14286061
RNA-Seq ExpressionSpg011586
SyntenySpg011586
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0005681 - spliceosomal complex (cellular component)
GO:0089701 - U2AF (cellular component)
GO:0030628 - pre-mRNA 3'-splice site binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR000571 - Zinc finger, CCCH-type
IPR003954 - RNA recognition motif domain, eukaryote
IPR009145 - U2 auxiliary factor small subunit
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583606.1 Splicing factor U2af small subunit A, partial [Cucurbita argyrosperma subsp. sororia]1.5e-10781.4Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPR+IQDHFE+FYEDLFQEL+KYGEIESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRYFLHHLPPLLCIILLLIFVPLA
        CDNLADHMVGNVYVQF+EEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRIS                       
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRYFLHHLPPLLCIILLLIFVPLA

Query:  NSAMCTSSDSHDLFLSFRELRHELFAVYHRRRSHSRSRSRSP
                         RELRHELFA YHRRRSHSRSRSRSP
Subjt:  NSAMCTSSDSHDLFLSFRELRHELFAVYHRRRSHSRSRSRSP

XP_008461981.1 PREDICTED: splicing factor U2af small subunit B-like [Cucumis melo]5.7e-10780.99Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPR+IQDHFE+FYEDLFQEL+KYGEIESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRYFLHHLPPLLCIILLLIFVPLA
        CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRI                        
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRYFLHHLPPLLCIILLLIFVPLA

Query:  NSAMCTSSDSHDLFLSFRELRHELFAVYHRRRSHSRSRSRSP
                         RELRHELFA+Y RRRSHSRSRSRSP
Subjt:  NSAMCTSSDSHDLFLSFRELRHELFAVYHRRRSHSRSRSRSP

XP_022964867.1 splicing factor U2af small subunit B-like [Cucurbita moschata]1.5e-10781.4Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPR+IQDHFE+FYEDLFQEL+KYGEIESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRYFLHHLPPLLCIILLLIFVPLA
        CDNLADHMVGNVYVQF+EEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRIS                       
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRYFLHHLPPLLCIILLLIFVPLA

Query:  NSAMCTSSDSHDLFLSFRELRHELFAVYHRRRSHSRSRSRSP
                         RELRHELFA YHRRRSHSRSRSRSP
Subjt:  NSAMCTSSDSHDLFLSFRELRHELFAVYHRRRSHSRSRSRSP

XP_022970323.1 splicing factor U2af small subunit B-like [Cucurbita maxima]4.4e-10780.99Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPR+IQDHFE+FYEDLFQEL+KYGEIESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRYFLHHLPPLLCIILLLIFVPLA
        CDNLADHMVGNVYVQF+EEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRIS                       
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRYFLHHLPPLLCIILLLIFVPLA

Query:  NSAMCTSSDSHDLFLSFRELRHELFAVYHRRRSHSRSRSRSP
                         RELRHELFA YHRRR HSRSRSRSP
Subjt:  NSAMCTSSDSHDLFLSFRELRHELFAVYHRRRSHSRSRSRSP

XP_023519661.1 splicing factor U2af small subunit B-like [Cucurbita pepo subsp. pepo]1.5e-10781.4Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPR+IQDHFE+FYEDLFQEL+KYGEIESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRYFLHHLPPLLCIILLLIFVPLA
        CDNLADHMVGNVYVQF+EEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRIS                       
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRYFLHHLPPLLCIILLLIFVPLA

Query:  NSAMCTSSDSHDLFLSFRELRHELFAVYHRRRSHSRSRSRSP
                         RELRHELFA YHRRRSHSRSRSRSP
Subjt:  NSAMCTSSDSHDLFLSFRELRHELFAVYHRRRSHSRSRSRSP

TrEMBL top hitse value%identityAlignment
A0A0A0LVA4 Uncharacterized protein1.4e-10680.58Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPR IQDHFE+FYEDLFQEL+KYGEIESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRYFLHHLPPLLCIILLLIFVPLA
        CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRI                        
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRYFLHHLPPLLCIILLLIFVPLA

Query:  NSAMCTSSDSHDLFLSFRELRHELFAVYHRRRSHSRSRSRSP
                         RELRHELFA+Y RR SHSRSRSRSP
Subjt:  NSAMCTSSDSHDLFLSFRELRHELFAVYHRRRSHSRSRSRSP

A0A1S3CFU2 splicing factor U2af small subunit B-like2.8e-10780.99Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPR+IQDHFE+FYEDLFQEL+KYGEIESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRYFLHHLPPLLCIILLLIFVPLA
        CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRI                        
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRYFLHHLPPLLCIILLLIFVPLA

Query:  NSAMCTSSDSHDLFLSFRELRHELFAVYHRRRSHSRSRSRSP
                         RELRHELFA+Y RRRSHSRSRSRSP
Subjt:  NSAMCTSSDSHDLFLSFRELRHELFAVYHRRRSHSRSRSRSP

A0A5D3CV58 Splicing factor U2af small subunit B-like2.8e-10780.99Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPR+IQDHFE+FYEDLFQEL+KYGEIESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRYFLHHLPPLLCIILLLIFVPLA
        CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRI                        
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRYFLHHLPPLLCIILLLIFVPLA

Query:  NSAMCTSSDSHDLFLSFRELRHELFAVYHRRRSHSRSRSRSP
                         RELRHELFA+Y RRRSHSRSRSRSP
Subjt:  NSAMCTSSDSHDLFLSFRELRHELFAVYHRRRSHSRSRSRSP

A0A6J1HM65 splicing factor U2af small subunit B-like7.3e-10881.4Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPR+IQDHFE+FYEDLFQEL+KYGEIESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRYFLHHLPPLLCIILLLIFVPLA
        CDNLADHMVGNVYVQF+EEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRIS                       
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRYFLHHLPPLLCIILLLIFVPLA

Query:  NSAMCTSSDSHDLFLSFRELRHELFAVYHRRRSHSRSRSRSP
                         RELRHELFA YHRRRSHSRSRSRSP
Subjt:  NSAMCTSSDSHDLFLSFRELRHELFAVYHRRRSHSRSRSRSP

A0A6J1I2J7 splicing factor U2af small subunit B-like2.1e-10780.99Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPR+IQDHFE+FYEDLFQEL+KYGEIESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRYFLHHLPPLLCIILLLIFVPLA
        CDNLADHMVGNVYVQF+EEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRIS                       
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRYFLHHLPPLLCIILLLIFVPLA

Query:  NSAMCTSSDSHDLFLSFRELRHELFAVYHRRRSHSRSRSRSP
                         RELRHELFA YHRRR HSRSRSRSP
Subjt:  NSAMCTSSDSHDLFLSFRELRHELFAVYHRRRSHSRSRSRSP

SwissProt top hitse value%identityAlignment
A1A4K8 Splicing factor U2AF 35 kDa subunit1.5e-6250.83Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQEL-SKYGEIESLN
        MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+ L N+Y+ P   +   D     +   E+Q+H+++F+E++F E+  KYGE+E +N
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQEL-SKYGEIESLN

Query:  VCDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRYFLHHLPPLLCIILLLIFVPL
        VCDNL DH+VGNVYV+FR EE A  A+ +L+ R++ G+PI  + SPVTDFREA CRQYE   C RGG+CNFMHLK IS                      
Subjt:  VCDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRYFLHHLPPLLCIILLLIFVPL

Query:  ANSAMCTSSDSHDLFLSFRELRHELFAVYHRRRSHSRSRSRS
                          RELR EL   Y RRR   RSRSRS
Subjt:  ANSAMCTSSDSHDLFLSFRELRHELFAVYHRRRSHSRSRSRS

Q6AUG0 Splicing factor U2af small subunit B3.9e-9065.7Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P++SPT++L+NMYQRPDMITPGVDAQG PIDP ++Q+HFEDFYED+++ELSK+GE+E+LNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRYFLHHLPPLLCIILLLIFVPLA
        CDNLADHM+GNVYVQFREEEQA  A   L GRFY+GRPIIV++SPVTDFREATCRQ+EEN CNRGGYCNFMH+K+I                        
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRYFLHHLPPLLCIILLLIFVPLA

Query:  NSAMCTSSDSHDLFLSFRELRHELFAVYHRRRSHSRSRSRSP
                         RELR +L+     RRSH RSRS SP
Subjt:  NSAMCTSSDSHDLFLSFRELRHELFAVYHRRRSHSRSRSRSP

Q9FMY5 Splicing factor U2af small subunit B1.9e-9268.16Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDMITPGVD QG P+DP +IQDHFEDFYED+F+EL+K+GE+ESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRYFLHHLPPLLCIILLLIFVPLA
        CDNLADHM+GNVYV F+EE+ AA AL+ L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGGYCNFMH+K+IS                       
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRYFLHHLPPLLCIILLLIFVPLA

Query:  NSAMCTSSDSHDLFLSFRELRHELFAVY---HRRRSHSRSRSRSP
                         RELR +LF  Y   +RR S SRSRS SP
Subjt:  NSAMCTSSDSHDLFLSFRELRHELFAVY---HRRRSHSRSRSRSP

Q9S709 Splicing factor U2af small subunit A7.5e-9469.26Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDMITPGVDAQG P+DPR+IQ+HFEDF+EDLF+EL K+GEIESLN+
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRYFLHHLPPLLCIILLLIFVPLA
        CDNLADHM+GNVYVQF+EE+QAA AL+ L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGGYCNFMH+K +S                       
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRYFLHHLPPLLCIILLLIFVPLA

Query:  NSAMCTSSDSHDLFLSFRELRHELFAVY---HRRRSHSRSRSRS
                         RELR +LF  Y   +RR S SRSRSRS
Subjt:  NSAMCTSSDSHDLFLSFRELRHELFAVY---HRRRSHSRSRSRS

Q9ZQW8 Splicing factor U2af small subunit A2.2e-9369.14Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH KPS+SPTLLLSNMY RPDMITPG+DAQGNPIDP +IQ  FEDFYED+F+ELSKYGEIESL+V
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRYFLHHLPPLLCIILLLIFVPLA
        CDN ADHM+GNVYVQFREE+QAA AL+ L+GR+Y+GRPIIV+FSPV+DFREATCRQYEEN CNRGGYCNFMH+K I                        
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRYFLHHLPPLLCIILLLIFVPLA

Query:  NSAMCTSSDSHDLFLSFRELRHELFAVYHR-RRSHSRSRSRSP
                         R+LR  LF   HR RRSHS  RSRSP
Subjt:  NSAMCTSSDSHDLFLSFRELRHELFAVYHR-RRSHSRSRSRSP

Arabidopsis top hitse value%identityAlignment
AT1G10320.1 Zinc finger C-x8-C-x5-C-x3-H type family protein8.1e-3542.35Show/hide
Query:  FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNVCDNLADHM
        FGTE+D+ +CPF+ K GACR G RCSR+H  P+ S TLL+ NMY  P  IT   D +G      E +  +E+FYED+  E  KYGE+ +  VC N + H+
Subjt:  FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNVCDNLADHM

Query:  VGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEEN---MCNRGGYCNFMHLKR
         GNVYV +R  E A  A ++++GR++AG+ +  +F  ++ ++ A C +Y ++    C+RG  CNF+H  R
Subjt:  VGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEEN---MCNRGGYCNFMHLKR

AT1G27650.1 U2 snRNP auxiliary factor small subunit, putative5.4e-9569.26Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDMITPGVDAQG P+DPR+IQ+HFEDF+EDLF+EL K+GEIESLN+
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRYFLHHLPPLLCIILLLIFVPLA
        CDNLADHM+GNVYVQF+EE+QAA AL+ L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGGYCNFMH+K +S                       
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRYFLHHLPPLLCIILLLIFVPLA

Query:  NSAMCTSSDSHDLFLSFRELRHELFAVY---HRRRSHSRSRSRS
                         RELR +LF  Y   +RR S SRSRSRS
Subjt:  NSAMCTSSDSHDLFLSFRELRHELFAVY---HRRRSHSRSRSRS

AT1G27650.2 U2 snRNP auxiliary factor small subunit, putative8.3e-6462.89Show/hide
Query:  MYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNVCDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFR
        MYQRPDMITPGVDAQG P+DPR+IQ+HFEDF+EDLF+EL K+GEIESLN+CDNLADHM+GNVYVQF+EE+QAA AL+ L GRFY+GRPII DFSPVTDFR
Subjt:  MYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNVCDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFR

Query:  EATCRQYEENMCNRGGYCNFMHLKRISRYFLHHLPPLLCIILLLIFVPLANSAMCTSSDSHDLFLSFRELRHELFAVY---HRRRSHSRSRSRS
        EATCRQYEEN CNRGGYCNFMH+K +S                                        RELR +LF  Y   +RR S SRSRSRS
Subjt:  EATCRQYEENMCNRGGYCNFMHLKRISRYFLHHLPPLLCIILLLIFVPLANSAMCTSSDSHDLFLSFRELRHELFAVY---HRRRSHSRSRSRS

AT5G42820.1 Zinc finger C-x8-C-x5-C-x3-H type family protein1.3e-9368.16Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDMITPGVD QG P+DP +IQDHFEDFYED+F+EL+K+GE+ESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRYFLHHLPPLLCIILLLIFVPLA
        CDNLADHM+GNVYV F+EE+ AA AL+ L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGGYCNFMH+K+IS                       
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRYFLHHLPPLLCIILLLIFVPLA

Query:  NSAMCTSSDSHDLFLSFRELRHELFAVY---HRRRSHSRSRSRSP
                         RELR +LF  Y   +RR S SRSRS SP
Subjt:  NSAMCTSSDSHDLFLSFRELRHELFAVY---HRRRSHSRSRSRSP

AT5G42820.2 Zinc finger C-x8-C-x5-C-x3-H type family protein1.3e-9368.16Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDMITPGVD QG P+DP +IQDHFEDFYED+F+EL+K+GE+ESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRYFLHHLPPLLCIILLLIFVPLA
        CDNLADHM+GNVYV F+EE+ AA AL+ L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGGYCNFMH+K+IS                       
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRYFLHHLPPLLCIILLLIFVPLA

Query:  NSAMCTSSDSHDLFLSFRELRHELFAVY---HRRRSHSRSRSRSP
                         RELR +LF  Y   +RR S SRSRS SP
Subjt:  NSAMCTSSDSHDLFLSFRELRHELFAVY---HRRRSHSRSRSRSP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAGCATTTGGCATCCATATTCGGGACGGAGAAGGACAGGGTTAACTGTCCCTTCTACTTCAAGATCGGGGCCTGCCGGCACGGTGATCGGTGTTCGCGGTTGCA
TACGAAGCCGAGCATAAGCCCCACCCTCTTGCTTTCTAATATGTATCAGAGACCCGACATGATTACTCCTGGTGTCGACGCGCAGGGGAATCCGATTGACCCTCGCGAGA
TTCAGGACCATTTTGAGGATTTCTATGAAGATTTATTCCAGGAACTGAGCAAGTACGGGGAGATTGAAAGTTTGAATGTTTGTGACAATCTAGCTGACCACATGGTGGGT
AATGTCTATGTTCAATTTCGAGAGGAAGAACAAGCTGCAAATGCTCTTCGGAATCTGAGTGGCAGATTTTATGCTGGACGTCCAATCATTGTTGACTTCTCTCCAGTTAC
AGACTTTAGAGAAGCTACTTGTAGGCAATATGAAGAAAACATGTGTAATCGTGGTGGATATTGCAATTTCATGCATTTGAAGAGGATCAGTAGGTATTTTCTTCACCACC
TTCCTCCTCTTCTATGCATTATTCTTCTGTTGATTTTTGTACCGCTCGCCAATTCTGCTATGTGCACTTCATCTGATAGCCATGATCTTTTTCTATCTTTCAGAGAGCTG
AGGCATGAACTGTTTGCAGTTTATCATCGAAGGCGTAGTCACAGTAGGAGCAGAAGCCGCAGCCCTATAGGCATCGTAGTTATGAAGAACGCTCTTATGGTAGGCATGGT
CATAGTCGGAGGTATGATGAAAGAGATGCTTATCATGAAAGTCGGAGCAGGAGGCATAGGAGTACAAGCCCTGGTCCTAAAAGAAGCAGAAGTCGTAGTCCACGAGGAAG
GAAGAATCGAAGTCCAGTTAGAGAAGGGAGTGAAGAGAGGCGTGCTAAAATTGAGCAGTGGAACAGGGAAAGAGAACAAGCAGCAAATGATAACAATGCCAATTCTGATA
GCAACAAAAATAGCCATGAAAGAAGTTACAATGGTTCAGGTTATGGCTTTAGAAGAACCTAGGAAGAGGAAGCATATGGCGAAGACTATCATACGCTTGCTTTGGTGTTT
AATATTGATTGATGTTGTGGGGATTGCAGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAGCATTTGGCATCCATATTCGGGACGGAGAAGGACAGGGTTAACTGTCCCTTCTACTTCAAGATCGGGGCCTGCCGGCACGGTGATCGGTGTTCGCGGTTGCA
TACGAAGCCGAGCATAAGCCCCACCCTCTTGCTTTCTAATATGTATCAGAGACCCGACATGATTACTCCTGGTGTCGACGCGCAGGGGAATCCGATTGACCCTCGCGAGA
TTCAGGACCATTTTGAGGATTTCTATGAAGATTTATTCCAGGAACTGAGCAAGTACGGGGAGATTGAAAGTTTGAATGTTTGTGACAATCTAGCTGACCACATGGTGGGT
AATGTCTATGTTCAATTTCGAGAGGAAGAACAAGCTGCAAATGCTCTTCGGAATCTGAGTGGCAGATTTTATGCTGGACGTCCAATCATTGTTGACTTCTCTCCAGTTAC
AGACTTTAGAGAAGCTACTTGTAGGCAATATGAAGAAAACATGTGTAATCGTGGTGGATATTGCAATTTCATGCATTTGAAGAGGATCAGTAGGTATTTTCTTCACCACC
TTCCTCCTCTTCTATGCATTATTCTTCTGTTGATTTTTGTACCGCTCGCCAATTCTGCTATGTGCACTTCATCTGATAGCCATGATCTTTTTCTATCTTTCAGAGAGCTG
AGGCATGAACTGTTTGCAGTTTATCATCGAAGGCGTAGTCACAGTAGGAGCAGAAGCCGCAGCCCTATAGGCATCGTAGTTATGAAGAACGCTCTTATGGTAGGCATGGT
CATAGTCGGAGGTATGATGAAAGAGATGCTTATCATGAAAGTCGGAGCAGGAGGCATAGGAGTACAAGCCCTGGTCCTAAAAGAAGCAGAAGTCGTAGTCCACGAGGAAG
GAAGAATCGAAGTCCAGTTAGAGAAGGGAGTGAAGAGAGGCGTGCTAAAATTGAGCAGTGGAACAGGGAAAGAGAACAAGCAGCAAATGATAACAATGCCAATTCTGATA
GCAACAAAAATAGCCATGAAAGAAGTTACAATGGTTCAGGTTATGGCTTTAGAAGAACCTAGGAAGAGGAAGCATATGGCGAAGACTATCATACGCTTGCTTTGGTGTTT
AATATTGATTGATGTTGTGGGGATTGCAGGTTAG
Protein sequenceShow/hide protein sequence
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNVCDNLADHMVG
NVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRYFLHHLPPLLCIILLLIFVPLANSAMCTSSDSHDLFLSFREL
RHELFAVYHRRRSHSRSRSRSPIGIVVMKNALMVGMVIVGGMMKEMLIMKVGAGGIGVQALVLKEAEVVVHEEGRIEVQLEKGVKRGVLKLSSGTGKENKQQMITMPILI
ATKIAMKEVTMVQVMALEEPRKRKHMAKTIIRLLWCLILIDVVGIAG