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Spg011590 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg011590
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationscaffold8:14210586..14217584
RNA-Seq ExpressionSpg011590
SyntenySpg011590
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053207.1 hypothetical protein E6C27_scaffold1192G00340 [Cucumis melo var. makuwa]1.0e-2350Show/hide
Query:  MQSQPLQDLRSTCQ-----------------PLHSGA------YKLNQKLYLVSCRVFENEE---------------------------LDVPRGSRSSL
        MQSQPLQ+L +T                    + S A      YKLNQKLYLVSC VFENEE                           L++PRG+R SL
Subjt:  MQSQPLQDLRSTCQ-----------------PLHSGA------YKLNQKLYLVSCRVFENEE---------------------------LDVPRGSRSSL

Query:  QTGELDKTPEAIWYRVHTGYIPLSTLSVLRDNAAVVEIEFPVPNTLPTSAESSRSSSSTWLELYIE
        QTGELDKT             PLSTLSVLRDN AVVEIE P PN LPTSAESSRS+SSTWLELY E
Subjt:  QTGELDKTPEAIWYRVHTGYIPLSTLSVLRDNAAVVEIEFPVPNTLPTSAESSRSSSSTWLELYIE

KAA0062409.1 reverse transcriptase [Cucumis melo var. makuwa]1.1e-1752.55Show/hide
Query:  MQSQPLQDLRSTCQPLHSG-------------------AYKLNQKLYLVSCRVFENEELDVP-RGSRSSLQTGELDKTPEAIWYRVHTGYIPLSTLSVLR
        MQSQPLQ+L +T   L +G                    +K NQKLYL      ++ + DV  RG+RSSLQ+GELD T             PLSTLSVLR
Subjt:  MQSQPLQDLRSTCQPLHSG-------------------AYKLNQKLYLVSCRVFENEELDVP-RGSRSSLQTGELDKTPEAIWYRVHTGYIPLSTLSVLR

Query:  DNAAVVEIEFPVPNTLPTSAESSRSSSSTWLELYIES
        DN AVVEIE PVP+TLPTSAESS S+SSTWLELY ES
Subjt:  DNAAVVEIEFPVPNTLPTSAESSRSSSSTWLELYIES

KAA0062674.1 uncharacterized protein E6C27_scaffold79G001940 [Cucumis melo var. makuwa]6.5e-1846.48Show/hide
Query:  YKLNQKLYLVSCRVFENEE---------------------------LDVPRGSRSSLQTGELDKTPEAIWYRVHTGYIPLSTLSVLRDNAAVVEIEFPVP
        ++ NQ LYLVSCRVF +E+                           L++PRG+R SLQTG+LDKT             PLS LSVLRDN  VVEIE PVP
Subjt:  YKLNQKLYLVSCRVFENEE---------------------------LDVPRGSRSSLQTGELDKTPEAIWYRVHTGYIPLSTLSVLRDNAAVVEIEFPVP

Query:  NTLPTSAESSRSSSSTWLELYIESDDLD----NSVSILSGLW
        +T PTS ESS S+SSTWLELYIES  ++     +  ++SGL+
Subjt:  NTLPTSAESSRSSSSTWLELYIESDDLD----NSVSILSGLW

TYK01618.1 uncharacterized protein E5676_scaffold451G002250 [Cucumis melo var. makuwa]8.5e-1865.62Show/hide
Query:  KLNQKLYLVSCRVFENEELDVPRGSRSSLQTGELDKTPEAIWYRVHTGYIPLSTLSVLRDNAAVVEIEFPVPNTLPTSAESSRSSSSTWLELYIES
        K NQKLYLV      N  L +PR +R SLQTGELDKT             PLSTLSVLRDN AVVEIE  VPNTLPTSAESS S+SSTWLELY ES
Subjt:  KLNQKLYLVSCRVFENEELDVPRGSRSSLQTGELDKTPEAIWYRVHTGYIPLSTLSVLRDNAAVVEIEFPVPNTLPTSAESSRSSSSTWLELYIES

TYK26572.1 putative Retrotransposon protein [Cucumis melo var. makuwa]1.1e-1752.55Show/hide
Query:  MQSQPLQDLRSTCQPLHSG-------------------AYKLNQKLYLVSCRVFENEELDVP-RGSRSSLQTGELDKTPEAIWYRVHTGYIPLSTLSVLR
        MQSQPLQ+L +T   L +G                    +K NQKLYL      ++ + DV  RG+RSSLQ+GELD T             PLSTLSVLR
Subjt:  MQSQPLQDLRSTCQPLHSG-------------------AYKLNQKLYLVSCRVFENEELDVP-RGSRSSLQTGELDKTPEAIWYRVHTGYIPLSTLSVLR

Query:  DNAAVVEIEFPVPNTLPTSAESSRSSSSTWLELYIES
        DN AVVEIE PVP+TLPTSAESS S+SSTWLELY ES
Subjt:  DNAAVVEIEFPVPNTLPTSAESSRSSSSTWLELYIES

TrEMBL top hitse value%identityAlignment
A0A5A7UFD2 Uncharacterized protein5.0e-2450Show/hide
Query:  MQSQPLQDLRSTCQ-----------------PLHSGA------YKLNQKLYLVSCRVFENEE---------------------------LDVPRGSRSSL
        MQSQPLQ+L +T                    + S A      YKLNQKLYLVSC VFENEE                           L++PRG+R SL
Subjt:  MQSQPLQDLRSTCQ-----------------PLHSGA------YKLNQKLYLVSCRVFENEE---------------------------LDVPRGSRSSL

Query:  QTGELDKTPEAIWYRVHTGYIPLSTLSVLRDNAAVVEIEFPVPNTLPTSAESSRSSSSTWLELYIE
        QTGELDKT             PLSTLSVLRDN AVVEIE P PN LPTSAESSRS+SSTWLELY E
Subjt:  QTGELDKTPEAIWYRVHTGYIPLSTLSVLRDNAAVVEIEFPVPNTLPTSAESSRSSSSTWLELYIE

A0A5A7V5Z6 Uncharacterized protein3.2e-1846.48Show/hide
Query:  YKLNQKLYLVSCRVFENEE---------------------------LDVPRGSRSSLQTGELDKTPEAIWYRVHTGYIPLSTLSVLRDNAAVVEIEFPVP
        ++ NQ LYLVSCRVF +E+                           L++PRG+R SLQTG+LDKT             PLS LSVLRDN  VVEIE PVP
Subjt:  YKLNQKLYLVSCRVFENEE---------------------------LDVPRGSRSSLQTGELDKTPEAIWYRVHTGYIPLSTLSVLRDNAAVVEIEFPVP

Query:  NTLPTSAESSRSSSSTWLELYIESDDLD----NSVSILSGLW
        +T PTS ESS S+SSTWLELYIES  ++     +  ++SGL+
Subjt:  NTLPTSAESSRSSSSTWLELYIESDDLD----NSVSILSGLW

A0A5A7V9N3 Reverse transcriptase5.4e-1852.55Show/hide
Query:  MQSQPLQDLRSTCQPLHSG-------------------AYKLNQKLYLVSCRVFENEELDVP-RGSRSSLQTGELDKTPEAIWYRVHTGYIPLSTLSVLR
        MQSQPLQ+L +T   L +G                    +K NQKLYL      ++ + DV  RG+RSSLQ+GELD T             PLSTLSVLR
Subjt:  MQSQPLQDLRSTCQPLHSG-------------------AYKLNQKLYLVSCRVFENEELDVP-RGSRSSLQTGELDKTPEAIWYRVHTGYIPLSTLSVLR

Query:  DNAAVVEIEFPVPNTLPTSAESSRSSSSTWLELYIES
        DN AVVEIE PVP+TLPTSAESS S+SSTWLELY ES
Subjt:  DNAAVVEIEFPVPNTLPTSAESSRSSSSTWLELYIES

A0A5D3BRI2 Uncharacterized protein4.1e-1865.62Show/hide
Query:  KLNQKLYLVSCRVFENEELDVPRGSRSSLQTGELDKTPEAIWYRVHTGYIPLSTLSVLRDNAAVVEIEFPVPNTLPTSAESSRSSSSTWLELYIES
        K NQKLYLV      N  L +PR +R SLQTGELDKT             PLSTLSVLRDN AVVEIE  VPNTLPTSAESS S+SSTWLELY ES
Subjt:  KLNQKLYLVSCRVFENEELDVPRGSRSSLQTGELDKTPEAIWYRVHTGYIPLSTLSVLRDNAAVVEIEFPVPNTLPTSAESSRSSSSTWLELYIES

A0A5D3DSY7 Putative Retrotransposon protein5.4e-1852.55Show/hide
Query:  MQSQPLQDLRSTCQPLHSG-------------------AYKLNQKLYLVSCRVFENEELDVP-RGSRSSLQTGELDKTPEAIWYRVHTGYIPLSTLSVLR
        MQSQPLQ+L +T   L +G                    +K NQKLYL      ++ + DV  RG+RSSLQ+GELD T             PLSTLSVLR
Subjt:  MQSQPLQDLRSTCQPLHSG-------------------AYKLNQKLYLVSCRVFENEELDVP-RGSRSSLQTGELDKTPEAIWYRVHTGYIPLSTLSVLR

Query:  DNAAVVEIEFPVPNTLPTSAESSRSSSSTWLELYIES
        DN AVVEIE PVP+TLPTSAESS S+SSTWLELY ES
Subjt:  DNAAVVEIEFPVPNTLPTSAESSRSSSSTWLELYIES

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAGCCAGCCATTGCAGGATCTGAGATCAACCTGTCAACCTCTGCATTCTGGGGCGTACAAGTTGAATCAGAAGCTCTATTTGGTAAGTTGTAGAGTGTTCGAAAA
TGAAGAGTTGGATGTGCCAAGAGGAAGTAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACACCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGT
CGACGTTGAGTGTACTCCGTGACAACGCTGCTGTCGTCGAGATCGAGTTCCCGGTGCCTAATACACTGCCAACGTCTGCTGAAAGTTCTAGATCAAGCTCCAGTACGTGG
TTGGAGTTGTATATTGAGTCCGATGACCTGGACAACTCAGTCTCAATCCTGAGTGGATTATGGACTCCTGTTCACGAGGAGTTGTCCTTTGATTTGTATGGTGAGAAGAG
TGCAGCTGAGGGTCCATTAGGTCCCACTGCCGATTGGTGGTGTTCGCACAAGAGGGTTGCTGCGTCTTCAATCTTATTGGCAAGAAAAGGCGAATTGATCAAGGCTTTCT
ACAAAAGAAAACAGAGGAAAGCTGGAATTTACCCAGAAATGCGGTCAAATGCGACCGCATTTTTGGAAAAACATAGGTCGTTCCGAGTCTGTCGCGGGTCGTTGAGGTTA
GTGCATGAATGTTGGGTTTCCAGAGTGGGTAAAAATAAGGTAAAGATAGACTCTAGAACACTGTGCAAGCATACACAATCCGCAGCAAGTAATAAGTATTTATCGAATCC
AGGGTCTGAATTATCTCTCACTTTATCAACTTTGTATAACTTTTCAATGCTTTCAAAAGTGGTTAAAATGATTGATTTTGATAGAATGCTGAAGCAAAAGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAAGCCAGCCATTGCAGGATCTGAGATCAACCTGTCAACCTCTGCATTCTGGGGCGTACAAGTTGAATCAGAAGCTCTATTTGGTAAGTTGTAGAGTGTTCGAAAA
TGAAGAGTTGGATGTGCCAAGAGGAAGTAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACACCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGT
CGACGTTGAGTGTACTCCGTGACAACGCTGCTGTCGTCGAGATCGAGTTCCCGGTGCCTAATACACTGCCAACGTCTGCTGAAAGTTCTAGATCAAGCTCCAGTACGTGG
TTGGAGTTGTATATTGAGTCCGATGACCTGGACAACTCAGTCTCAATCCTGAGTGGATTATGGACTCCTGTTCACGAGGAGTTGTCCTTTGATTTGTATGGTGAGAAGAG
TGCAGCTGAGGGTCCATTAGGTCCCACTGCCGATTGGTGGTGTTCGCACAAGAGGGTTGCTGCGTCTTCAATCTTATTGGCAAGAAAAGGCGAATTGATCAAGGCTTTCT
ACAAAAGAAAACAGAGGAAAGCTGGAATTTACCCAGAAATGCGGTCAAATGCGACCGCATTTTTGGAAAAACATAGGTCGTTCCGAGTCTGTCGCGGGTCGTTGAGGTTA
GTGCATGAATGTTGGGTTTCCAGAGTGGGTAAAAATAAGGTAAAGATAGACTCTAGAACACTGTGCAAGCATACACAATCCGCAGCAAGTAATAAGTATTTATCGAATCC
AGGGTCTGAATTATCTCTCACTTTATCAACTTTGTATAACTTTTCAATGCTTTCAAAAGTGGTTAAAATGATTGATTTTGATAGAATGCTGAAGCAAAAGAAATGA
Protein sequenceShow/hide protein sequence
MQSQPLQDLRSTCQPLHSGAYKLNQKLYLVSCRVFENEELDVPRGSRSSLQTGELDKTPEAIWYRVHTGYIPLSTLSVLRDNAAVVEIEFPVPNTLPTSAESSRSSSSTW
LELYIESDDLDNSVSILSGLWTPVHEELSFDLYGEKSAAEGPLGPTADWWCSHKRVAASSILLARKGELIKAFYKRKQRKAGIYPEMRSNATAFLEKHRSFRVCRGSLRL
VHECWVSRVGKNKVKIDSRTLCKHTQSAASNKYLSNPGSELSLTLSTLYNFSMLSKVVKMIDFDRMLKQKK