; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg011594 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg011594
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionEukaryotic translation initiation factor 3 subunit I
Genome locationscaffold8:15415213..15418381
RNA-Seq ExpressionSpg011594
SyntenySpg011594
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8734433.1 Eukaryotic translation initiation factor 3 subunit I [Hibiscus syriacus]1.4e-0924.17Show/hide
Query:  WSQFCAKPEPVNSNIVREFYANLDDQEEFQ------GAQWRLSKTEKRTFQAAYLKSKANAWMGFIKLRLMPTTHDSTVSRDRVLLAFAILRSMSIDVDK
        W +    P  VN+++V+ FYAN+ +  E          QW   +  +RT     L+ +A  W  F+K +L+PT+H++TVS  R+    +I+   SID++K
Subjt:  WSQFCAKPEPVNSNIVREFYANLDDQEEFQ------GAQWRLSKTEKRTFQAAYLKSKANAWMGFIKLRLMPTTHDSTVSRDRVLLAFAILRSMSIDVDK

Query:  GIIDTPNLARLQRTQEARQGGLVCGIHQ-------------------------MQEQLQLHSSRMEFVERQLQTFWSYVKRRDAALRVALQSNFSKPYPA
         I++  +    +      +  ++ G+ +                         ++E ++    ++E +  ++ T++SY KRRD  L              
Subjt:  GIIDTPNLARLQRTQEARQGGLVCGIHQ-------------------------MQEQLQLHSSRMEFVERQLQTFWSYVKRRDAALRVALQSNFSKPYPA

Query:  LPVFPNDLLNP
        +PVFP  LL P
Subjt:  LPVFPNDLLNP

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]7.0e-1426.06Show/hide
Query:  FLRTGIVNLGWSQFCAKPEPVNSNIVREFYANLDDQEE--------------------------------------------------FQGAQWRLSKTE
        F+   I    W QFCA PE     +VREFYANL D EE                                                    GA+W +S   
Subjt:  FLRTGIVNLGWSQFCAKPEPVNSNIVREFYANLDDQEE--------------------------------------------------FQGAQWRLSKTE

Query:  KRTFQAAYLKSKANAWMGFIKLRLMPTTHDSTVSRDRVLLAFAILRSMSIDVDK--------------------------------------------GI
          T   + L   A  W  F+K RL+PTTH  TVS+DR+LL  ++L   SI+V +                                            G 
Subjt:  KRTFQAAYLKSKANAWMGFIKLRLMPTTHDSTVSRDRVLLAFAILRSMSIDVDK--------------------------------------------GI

Query:  IDTPNLARLQR---TQEARQ---------------GGLVCGIHQMQEQL------QLH-SSRMEFVERQLQTFWSYVKRRDAALRVALQSNFSKPYPALP
        ID   +AR+ +   T+  +Q               G ++  +  ++++L      Q H  S ++   +Q Q FW+Y K RD AL+ ALQ+NF++P P  P
Subjt:  IDTPNLARLQR---TQEARQ---------------GGLVCGIHQMQEQL------QLH-SSRMEFVERQLQTFWSYVKRRDAALRVALQSNFSKPYPALP

Query:  VFPNDLL
         FP ++L
Subjt:  VFPNDLL

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)3.4e-1426.06Show/hide
Query:  FLRTGIVNLGWSQFCAKPEPVNSNIVREFYANLDDQEE--------------------------------------------------FQGAQWRLSKTE
        F+   I    W QFCA PE     +VREFYANL D EE                                                    GA+W +S   
Subjt:  FLRTGIVNLGWSQFCAKPEPVNSNIVREFYANLDDQEE--------------------------------------------------FQGAQWRLSKTE

Query:  KRTFQAAYLKSKANAWMGFIKLRLMPTTHDSTVSRDRVLLAFAILRSMSIDVDK--------------------------------------------GI
          T   + L   A  W  F+K RL+PTTH  TVS+DR+LL  ++L   SI+V +                                            G 
Subjt:  KRTFQAAYLKSKANAWMGFIKLRLMPTTHDSTVSRDRVLLAFAILRSMSIDVDK--------------------------------------------GI

Query:  IDTPNLARLQR---TQEARQ---------------GGLVCGIHQMQEQL------QLH-SSRMEFVERQLQTFWSYVKRRDAALRVALQSNFSKPYPALP
        ID   +AR+ +   T+  +Q               G ++  +  ++++L      Q H  S ++   +Q Q FW+Y K RD AL+ ALQ+NF++P P  P
Subjt:  IDTPNLARLQR---TQEARQ---------------GGLVCGIHQMQEQL------QLH-SSRMEFVERQLQTFWSYVKRRDAALRVALQSNFSKPYPALP

Query:  VFPNDLL
         FP ++L
Subjt:  VFPNDLL

A0A6A3CYH7 Eukaryotic translation initiation factor 3 subunit I6.6e-1024.17Show/hide
Query:  WSQFCAKPEPVNSNIVREFYANLDDQEEFQ------GAQWRLSKTEKRTFQAAYLKSKANAWMGFIKLRLMPTTHDSTVSRDRVLLAFAILRSMSIDVDK
        W +    P  VN+++V+ FYAN+ +  E          QW   +  +RT     L+ +A  W  F+K +L+PT+H++TVS  R+    +I+   SID++K
Subjt:  WSQFCAKPEPVNSNIVREFYANLDDQEEFQ------GAQWRLSKTEKRTFQAAYLKSKANAWMGFIKLRLMPTTHDSTVSRDRVLLAFAILRSMSIDVDK

Query:  GIIDTPNLARLQRTQEARQGGLVCGIHQ-------------------------MQEQLQLHSSRMEFVERQLQTFWSYVKRRDAALRVALQSNFSKPYPA
         I++  +    +      +  ++ G+ +                         ++E ++    ++E +  ++ T++SY KRRD  L              
Subjt:  GIIDTPNLARLQRTQEARQGGLVCGIHQ-------------------------MQEQLQLHSSRMEFVERQLQTFWSYVKRRDAALRVALQSNFSKPYPA

Query:  LPVFPNDLLNP
        +PVFP  LL P
Subjt:  LPVFPNDLLNP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAAACGAGAGCTAGAAAAGAGAGGGAGAATGAGGACGAAGAGGTACCTGTTACCCCTGTAGCACAGAAAGCGAAAACGAAAAAGAAGAAGACGCCAGAGGAGAA
AGAAGCGAAAAGGAGGAGAAAGCAACAGAGGGCTGAGGAACAAGACAAGGCAACAGAGGTTGCGACTGTTACTGCCACAGTAGGAGAAGAAAGCCCGAAACAACCAGAGG
AAAATACCGAGGAAAATACCGAGCAGAGGGTCGCGGATACAGAAGAAGAACGAACAGAAGAGGTTCAAGAAGATCAGACCGAGGAAGTTCGAAAAGAAATTACAGAGGAA
GTTCAAGAACAGCAGGCCGAGGATGTTCAAATGCAACAAGCAGAAGAGGTTCAGGTACCGGATAATGAGCCAGTGAAGGACGCTCAAGTAGAGGTGATCATGCCGGAGGT
GCCAAAGCGTCGCCGCGTTAAGAGGAAAGCAGGCCGCGCTAGGGTTGTCCGAACTGATACTCCTTCACCTCTGACCACGGATTCTGAAAGAGAGAATGCAGAGAGAGTAG
AGCGTGAAAAGAAGGAAGCTGAGGACAAGGCAAGAGAAGAAGAAGCGAAGAAAGCAGAAGAGGAGATTTTGCTCAAGCGAAGGGCGGAAAAAGGCAAAAGCGTGGCTGAA
GCATCGGAAGAACCTGACGAGATTGAGGAATCGAGATTTCCGTACAATCGCTTCGTCAATAACCTTGCTTGGGCAAAGTATGTTGAGATGCTGAGAAGGGATTTCCTGTT
TGAACGAGGATTTGGTGATGATCTGCCGCGGTTCTTGAGGACTGGAATAGTGAACCTCGGCTGGAGTCAATTTTGTGCGAAGCCGGAGCCTGTTAATTCCAACATTGTTC
GGGAGTTTTACGCAAATCTTGACGATCAGGAAGAATTTCAGGGGGCCCAGTGGAGACTGTCGAAGACGGAAAAGCGCACATTTCAGGCTGCTTATTTGAAAAGCAAGGCC
AATGCATGGATGGGTTTCATCAAGCTGCGCTTAATGCCGACAACTCACGACTCAACGGTATCTCGAGACCGAGTTTTGCTTGCCTTTGCTATTCTTCGTTCCATGAGTAT
TGATGTGGACAAGGGAATAATTGACACACCAAATCTGGCTAGGCTTCAGAGGACGCAGGAAGCACGCCAAGGAGGTTTGGTGTGCGGCATCCACCAAATGCAGGAGCAAT
TACAGCTGCATTCCAGCAGGATGGAATTTGTTGAAAGACAATTGCAGACTTTCTGGAGCTATGTGAAAAGGAGGGATGCCGCGTTGAGGGTAGCCTTGCAGTCGAATTTT
TCCAAGCCATATCCGGCTTTGCCCGTATTCCCTAACGACCTACTGAACCCCTGGATCCCACCCCCACCTGTTGAACGAGAGGAAGTTGATGAAGAGCAGGAAACCTTGTG
CTTGAGCATTTTCTCTGACCTGGTTGTTGCTGCGGCAAAGAAAATTCTGGAGGTAGTGTTGACTTATGTGATCCGCTTTAAGCTTAGGTCTAGTCCCGGGCTTATTTGTC
TTCGCGTTAAAAGGGCTGCTTTAAGTCTGAAAAACAAAAGTATAAACCCCTTGAAAATGTGTTTTGATATGTCTGATAATAGAGCTAAGCTGTGGCAAGTTCTTAGAATT
AAGTTAAAAGTGGTGATTATTTGTCCATGCCGGAAGAATTATTTTGCTGCAGCAGAGCTTGGTTTTGCAGAGTGCTCAGAATCTGTTGCTGGGCGACTTGAGGGAGCAAA
TTCTGTGCTGCAGCAAAACTGGGAGCAGAACTGCCACGTCACAGCTCGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCAAAACGAGAGCTAGAAAAGAGAGGGAGAATGAGGACGAAGAGGTACCTGTTACCCCTGTAGCACAGAAAGCGAAAACGAAAAAGAAGAAGACGCCAGAGGAGAA
AGAAGCGAAAAGGAGGAGAAAGCAACAGAGGGCTGAGGAACAAGACAAGGCAACAGAGGTTGCGACTGTTACTGCCACAGTAGGAGAAGAAAGCCCGAAACAACCAGAGG
AAAATACCGAGGAAAATACCGAGCAGAGGGTCGCGGATACAGAAGAAGAACGAACAGAAGAGGTTCAAGAAGATCAGACCGAGGAAGTTCGAAAAGAAATTACAGAGGAA
GTTCAAGAACAGCAGGCCGAGGATGTTCAAATGCAACAAGCAGAAGAGGTTCAGGTACCGGATAATGAGCCAGTGAAGGACGCTCAAGTAGAGGTGATCATGCCGGAGGT
GCCAAAGCGTCGCCGCGTTAAGAGGAAAGCAGGCCGCGCTAGGGTTGTCCGAACTGATACTCCTTCACCTCTGACCACGGATTCTGAAAGAGAGAATGCAGAGAGAGTAG
AGCGTGAAAAGAAGGAAGCTGAGGACAAGGCAAGAGAAGAAGAAGCGAAGAAAGCAGAAGAGGAGATTTTGCTCAAGCGAAGGGCGGAAAAAGGCAAAAGCGTGGCTGAA
GCATCGGAAGAACCTGACGAGATTGAGGAATCGAGATTTCCGTACAATCGCTTCGTCAATAACCTTGCTTGGGCAAAGTATGTTGAGATGCTGAGAAGGGATTTCCTGTT
TGAACGAGGATTTGGTGATGATCTGCCGCGGTTCTTGAGGACTGGAATAGTGAACCTCGGCTGGAGTCAATTTTGTGCGAAGCCGGAGCCTGTTAATTCCAACATTGTTC
GGGAGTTTTACGCAAATCTTGACGATCAGGAAGAATTTCAGGGGGCCCAGTGGAGACTGTCGAAGACGGAAAAGCGCACATTTCAGGCTGCTTATTTGAAAAGCAAGGCC
AATGCATGGATGGGTTTCATCAAGCTGCGCTTAATGCCGACAACTCACGACTCAACGGTATCTCGAGACCGAGTTTTGCTTGCCTTTGCTATTCTTCGTTCCATGAGTAT
TGATGTGGACAAGGGAATAATTGACACACCAAATCTGGCTAGGCTTCAGAGGACGCAGGAAGCACGCCAAGGAGGTTTGGTGTGCGGCATCCACCAAATGCAGGAGCAAT
TACAGCTGCATTCCAGCAGGATGGAATTTGTTGAAAGACAATTGCAGACTTTCTGGAGCTATGTGAAAAGGAGGGATGCCGCGTTGAGGGTAGCCTTGCAGTCGAATTTT
TCCAAGCCATATCCGGCTTTGCCCGTATTCCCTAACGACCTACTGAACCCCTGGATCCCACCCCCACCTGTTGAACGAGAGGAAGTTGATGAAGAGCAGGAAACCTTGTG
CTTGAGCATTTTCTCTGACCTGGTTGTTGCTGCGGCAAAGAAAATTCTGGAGGTAGTGTTGACTTATGTGATCCGCTTTAAGCTTAGGTCTAGTCCCGGGCTTATTTGTC
TTCGCGTTAAAAGGGCTGCTTTAAGTCTGAAAAACAAAAGTATAAACCCCTTGAAAATGTGTTTTGATATGTCTGATAATAGAGCTAAGCTGTGGCAAGTTCTTAGAATT
AAGTTAAAAGTGGTGATTATTTGTCCATGCCGGAAGAATTATTTTGCTGCAGCAGAGCTTGGTTTTGCAGAGTGCTCAGAATCTGTTGCTGGGCGACTTGAGGGAGCAAA
TTCTGTGCTGCAGCAAAACTGGGAGCAGAACTGCCACGTCACAGCTCGTTAG
Protein sequenceShow/hide protein sequence
MAKTRARKERENEDEEVPVTPVAQKAKTKKKKTPEEKEAKRRRKQQRAEEQDKATEVATVTATVGEESPKQPEENTEENTEQRVADTEEERTEEVQEDQTEEVRKEITEE
VQEQQAEDVQMQQAEEVQVPDNEPVKDAQVEVIMPEVPKRRRVKRKAGRARVVRTDTPSPLTTDSERENAERVEREKKEAEDKAREEEAKKAEEEILLKRRAEKGKSVAE
ASEEPDEIEESRFPYNRFVNNLAWAKYVEMLRRDFLFERGFGDDLPRFLRTGIVNLGWSQFCAKPEPVNSNIVREFYANLDDQEEFQGAQWRLSKTEKRTFQAAYLKSKA
NAWMGFIKLRLMPTTHDSTVSRDRVLLAFAILRSMSIDVDKGIIDTPNLARLQRTQEARQGGLVCGIHQMQEQLQLHSSRMEFVERQLQTFWSYVKRRDAALRVALQSNF
SKPYPALPVFPNDLLNPWIPPPPVEREEVDEEQETLCLSIFSDLVVAAAKKILEVVLTYVIRFKLRSSPGLICLRVKRAALSLKNKSINPLKMCFDMSDNRAKLWQVLRI
KLKVVIICPCRKNYFAAAELGFAECSESVAGRLEGANSVLQQNWEQNCHVTAR