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Spg011611 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg011611
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionhigh mobility group B protein 14
Genome locationscaffold1:1802354..1804805
RNA-Seq ExpressionSpg011611
SyntenySpg011611
Gene Ontology termsGO:0010197 - polar nucleus fusion (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR009071 - High mobility group box domain
IPR036910 - High mobility group box domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581419.1 High mobility group B protein 14, partial [Cucurbita argyrosperma subsp. sororia]2.1e-6390.13Show/hide
Query:  MAKAKRPQKSPSTSAHDSSEAFEEASQEDTGLSVKRSEEMKRSARASRF-NTEKRAKTTKKPKSKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQN
        MAKAK+PQKSPST+AHDSSEAFEEASQE TGL VKRSEEMKRSA+  RF NTEK  KT K+PKS QKKKNDKFD NKPKKPPTAFFYFLDDFRKEFQEQN
Subjt:  MAKAKRPQKSPSTSAHDSSEAFEEASQEDTGLSVKRSEEMKRSARASRF-NTEKRAKTTKKPKSKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQN

Query:  PDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMAEYKKRKVS
        PDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMAEYKKRK S
Subjt:  PDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMAEYKKRKVS

XP_022926030.1 high mobility group B protein 14 [Cucurbita moschata]2.5e-6490.79Show/hide
Query:  MAKAKRPQKSPSTSAHDSSEAFEEASQEDTGLSVKRSEEMKRSARASRF-NTEKRAKTTKKPKSKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQN
        MAKAK+PQKSPST+AHDSSEAFEEASQEDTGL VKRSEEMKRSA+  RF NTEK  KT K+PKS QKKKNDKFD NKPKKPPTAFFYFLDDFRKEFQEQN
Subjt:  MAKAKRPQKSPSTSAHDSSEAFEEASQEDTGLSVKRSEEMKRSARASRF-NTEKRAKTTKKPKSKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQN

Query:  PDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMAEYKKRKVS
        PDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMAEYKKRK S
Subjt:  PDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMAEYKKRKVS

XP_022978337.1 high mobility group B protein 14 [Cucurbita maxima]3.6e-6389.47Show/hide
Query:  MAKAKRPQKSPSTSAHDSSEAFEEASQEDTGLSVKRSEEMKRSARASRF-NTEKRAKTTKKPKSKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQN
        MAKAK+PQKSPST+AHDSSEAFEEASQEDTGL VKRSEEMKRSA+  RF NTEK  KT K+PKS QKKKNDKFD NKPKKPPTAFFYFLDDFRKEFQEQN
Subjt:  MAKAKRPQKSPSTSAHDSSEAFEEASQEDTGLSVKRSEEMKRSARASRF-NTEKRAKTTKKPKSKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQN

Query:  PDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMAEYKKRKVS
        PDVKSMRDVGKACG+KWKTMTYEEKVQYYDIA EKRAEFDKAMAEYKKRK S
Subjt:  PDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMAEYKKRKVS

XP_023544425.1 high mobility group B protein 14 [Cucurbita pepo subsp. pepo]4.2e-6490.79Show/hide
Query:  MAKAKRPQKSPSTSAHDSSEAFEEASQEDTGLSVKRSEEMKRSARASRFN-TEKRAKTTKKPKSKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQN
        MAKAK+PQKSPST+AHDSSEAFEEASQEDTGL VKRSEEMKRSA+A RFN TEK  KT K+PKS QKKKNDK D NKPKKPPTAFFYFLDDFRKEFQEQN
Subjt:  MAKAKRPQKSPSTSAHDSSEAFEEASQEDTGLSVKRSEEMKRSARASRFN-TEKRAKTTKKPKSKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQN

Query:  PDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMAEYKKRKVS
        PDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMAEYKKRK S
Subjt:  PDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMAEYKKRKVS

XP_038881049.1 high mobility group B protein 14 isoform X1 [Benincasa hispida]1.5e-6490.79Show/hide
Query:  MAKAKRPQKSPSTSAHDSSEAFEEASQEDTGLSVKRSEEMKRSARASRFNTE-KRAKTTKKPKSKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQN
        MAKAK+PQKSPS SAHDSSEAFEEAS EDTGL VKRSEEMKR+A+ASRFNT+ KR KT KKPKSKQKKKNDKFD NKPKKPPTAFFYFLDDFRKEFQEQN
Subjt:  MAKAKRPQKSPSTSAHDSSEAFEEASQEDTGLSVKRSEEMKRSARASRFNTE-KRAKTTKKPKSKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQN

Query:  PDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMAEYKKRKVS
        PDVK+MRDVGKACGEKWKTMTYEEKVQYYDIAT+KRAEFDKAMAEYKKRK S
Subjt:  PDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMAEYKKRKVS

TrEMBL top hitse value%identityAlignment
A0A0A0KKL8 HMG box domain-containing protein1.4e-5784.77Show/hide
Query:  MAKAKRPQKSPSTSAHDSSEAFEEASQEDTGLSVKRSEEMKRSARASRFNTEKRAKTTKKPKSKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNP
        MAKAK PQKS S SA DSS    EAS E+TGL VKRSE MK +A+ASRFNT+KRAKT KKP SKQKKKNDKFD NKPKKPPTAFFYFLDDFRKEFQEQNP
Subjt:  MAKAKRPQKSPSTSAHDSSEAFEEASQEDTGLSVKRSEEMKRSARASRFNTEKRAKTTKKPKSKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNP

Query:  DVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMAEYKKRKVS
        DVK+MRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAM EYKKR  S
Subjt:  DVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMAEYKKRKVS

A0A1S3AZW3 high mobility group B protein 141.0e-5583.55Show/hide
Query:  MAKAKRPQKSPSTSAHDSSEAFEEASQEDTGLSVKRSEEMKRSARASRFNTE-KRAKTTKKPKSKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQN
        MAKAK  QKSPS SAHDSS    EAS E TGL VKR +EMK +A+ASRFNT+ KR KT KKPKSKQKKKND+FD NKPKKPPTAFFYFLDDFRKEFQEQN
Subjt:  MAKAKRPQKSPSTSAHDSSEAFEEASQEDTGLSVKRSEEMKRSARASRFNTE-KRAKTTKKPKSKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQN

Query:  PDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMAEYKKRKVS
        PDVK+MRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAM EYKKR  S
Subjt:  PDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMAEYKKRKVS

A0A6J1CXW3 high mobility group B protein 14 isoform X18.3e-5094.64Show/hide
Query:  MKRSARASRFNTEKRAKTTKKPKSKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFD
        MKRSARASRFN++KRAKT K+PKSK+KKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFD
Subjt:  MKRSARASRFNTEKRAKTTKKPKSKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFD

Query:  KAMAEYKKRKVS
        KAMAEYKKRK S
Subjt:  KAMAEYKKRKVS

A0A6J1EJV4 high mobility group B protein 141.2e-6490.79Show/hide
Query:  MAKAKRPQKSPSTSAHDSSEAFEEASQEDTGLSVKRSEEMKRSARASRF-NTEKRAKTTKKPKSKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQN
        MAKAK+PQKSPST+AHDSSEAFEEASQEDTGL VKRSEEMKRSA+  RF NTEK  KT K+PKS QKKKNDKFD NKPKKPPTAFFYFLDDFRKEFQEQN
Subjt:  MAKAKRPQKSPSTSAHDSSEAFEEASQEDTGLSVKRSEEMKRSARASRF-NTEKRAKTTKKPKSKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQN

Query:  PDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMAEYKKRKVS
        PDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMAEYKKRK S
Subjt:  PDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMAEYKKRKVS

A0A6J1IKU3 high mobility group B protein 141.7e-6389.47Show/hide
Query:  MAKAKRPQKSPSTSAHDSSEAFEEASQEDTGLSVKRSEEMKRSARASRF-NTEKRAKTTKKPKSKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQN
        MAKAK+PQKSPST+AHDSSEAFEEASQEDTGL VKRSEEMKRSA+  RF NTEK  KT K+PKS QKKKNDKFD NKPKKPPTAFFYFLDDFRKEFQEQN
Subjt:  MAKAKRPQKSPSTSAHDSSEAFEEASQEDTGLSVKRSEEMKRSARASRF-NTEKRAKTTKKPKSKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQN

Query:  PDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMAEYKKRKVS
        PDVKSMRDVGKACG+KWKTMTYEEKVQYYDIA EKRAEFDKAMAEYKKRK S
Subjt:  PDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMAEYKKRKVS

SwissProt top hitse value%identityAlignment
O49595 High mobility group B protein 16.4e-1546.39Show/hide
Query:  KRAKTTKKPKSKQ--KKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMAEYKK
        KR    +KP  ++  K+K  K D NKPK+ P+AFF FL+DFR  F+++NP+VK++  VGKA G+KWK+M+  EK  Y + A +++AE++K M  Y K
Subjt:  KRAKTTKKPKSKQ--KKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMAEYKK

O64702 High mobility group B protein 141.3e-3159.68Show/hide
Query:  TGLSVKRSEEMKRSARASRFNTEKRAKTTKKPKSKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYD
        +G S +  E   +S+  +R +T  R +  +KPK+  KKK  K     PKKP TAFF+FLDDFRK++QE+NPDVKSMR++GK CGEKWKTMTYEEKV+YYD
Subjt:  TGLSVKRSEEMKRSARASRFNTEKRAKTTKKPKSKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYD

Query:  IATEKRAEFDKAMAEYKKRKVSSA
        IATEKR EF +AM EY KR  S A
Subjt:  IATEKRAEFDKAMAEYKKRKVSSA

P40619 HMG1/2-like protein1.2e-1340.19Show/hide
Query:  SRFNTEKRAKTTKKPKSKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMAEYK
        ++   +K+A  TKK K   K      D NKPK+PP+AFF F++DFRK ++E++P+ KS+  VGKA G+KWK +T  EK  +   A +++ E++K +  Y 
Subjt:  SRFNTEKRAKTTKKPKSKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMAEYK

Query:  KRKVSSA
        K++ + A
Subjt:  KRKVSSA

P40621 HMG1/2-like protein2.4e-1443Show/hide
Query:  RAKTTKKPKSKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMAEYKKRKVSSA
        ++K  +KP +K KK     D NKPK+ P+AFF F+ +FR+EF+++NP  KS+  VGKA GE+WK+++  EK  Y   A + + E++KA+A Y K + ++A
Subjt:  RAKTTKKPKSKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMAEYKKRKVSSA

Q42344 High mobility group B protein 41.2e-1342.59Show/hide
Query:  ARASRFNTEKRAKTTKKPKSKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMA
        ++A   +T++R KT  +   K+ KK    D N+PK+PP+AFF FL+DFRKEF   NP+ KS+  VGKA G +WK MT E+K  Y   A  ++ E+ K + 
Subjt:  ARASRFNTEKRAKTTKKPKSKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMA

Query:  EYKKRKVS
        +Y  +  S
Subjt:  EYKKRKVS

Arabidopsis top hitse value%identityAlignment
AT2G34450.1 HMG-box (high mobility group) DNA-binding family protein9.2e-3359.68Show/hide
Query:  TGLSVKRSEEMKRSARASRFNTEKRAKTTKKPKSKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYD
        +G S +  E   +S+  +R +T  R +  +KPK+  KKK  K     PKKP TAFF+FLDDFRK++QE+NPDVKSMR++GK CGEKWKTMTYEEKV+YYD
Subjt:  TGLSVKRSEEMKRSARASRFNTEKRAKTTKKPKSKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYD

Query:  IATEKRAEFDKAMAEYKKRKVSSA
        IATEKR EF +AM EY KR  S A
Subjt:  IATEKRAEFDKAMAEYKKRKVSSA

AT2G34450.2 HMG-box (high mobility group) DNA-binding family protein1.7e-3160Show/hide
Query:  TGLSVKRSEEMKRSARASRFNTEKRAKTTKKPKSKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDV-GKACGEKWKTMTYEEKVQYY
        +G S +  E   +S+  +R +T  R +  +KPK+  KKK  K     PKKP TAFF+FLDDFRK++QE+NPDVKSMR+V GK CGEKWKTMTYEEKV+YY
Subjt:  TGLSVKRSEEMKRSARASRFNTEKRAKTTKKPKSKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDV-GKACGEKWKTMTYEEKVQYY

Query:  DIATEKRAEFDKAMAEYKKRKVSSA
        DIATEKR EF +AM EY KR  S A
Subjt:  DIATEKRAEFDKAMAEYKKRKVSSA

AT3G51880.1 high mobility group B14.6e-1646.39Show/hide
Query:  KRAKTTKKPKSKQ--KKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMAEYKK
        KR    +KP  ++  K+K  K D NKPK+ P+AFF FL+DFR  F+++NP+VK++  VGKA G+KWK+M+  EK  Y + A +++AE++K M  Y K
Subjt:  KRAKTTKKPKSKQ--KKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMAEYKK

AT3G51880.2 high mobility group B14.6e-1646.39Show/hide
Query:  KRAKTTKKPKSKQ--KKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMAEYKK
        KR    +KP  ++  K+K  K D NKPK+ P+AFF FL+DFR  F+++NP+VK++  VGKA G+KWK+M+  EK  Y + A +++AE++K M  Y K
Subjt:  KRAKTTKKPKSKQ--KKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMAEYKK

AT3G51880.3 high mobility group B14.6e-1646.39Show/hide
Query:  KRAKTTKKPKSKQ--KKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMAEYKK
        KR    +KP  ++  K+K  K D NKPK+ P+AFF FL+DFR  F+++NP+VK++  VGKA G+KWK+M+  EK  Y + A +++AE++K M  Y K
Subjt:  KRAKTTKKPKSKQ--KKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMAEYKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAAGCGAAGAGGCCCCAGAAATCACCATCAACTTCTGCGCATGATTCTTCCGAAGCGTTTGAAGAAGCGTCCCAAGAGGATACGGGATTAAGCGTAAAAAGAAG
TGAAGAGATGAAGAGGTCAGCAAGAGCTAGTAGATTTAACACGGAGAAGAGAGCGAAGACAACTAAGAAGCCAAAATCAAAGCAGAAGAAGAAAAATGACAAATTTGATG
CCAATAAGCCAAAGAAACCACCTACTGCTTTCTTTTACTTTTTGGATGACTTCCGCAAGGAATTTCAAGAACAAAATCCAGATGTCAAATCAATGCGTGATGTTGGCAAG
GCATGTGGAGAGAAATGGAAAACAATGACGTATGAGGAAAAAGTACAATATTATGATATTGCCACAGAGAAACGTGCAGAGTTTGATAAAGCCATGGCAGAATATAAGAA
GAGGAAGGTAAGCTCTGCCGTGGTTTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAAGCGAAGAGGCCCCAGAAATCACCATCAACTTCTGCGCATGATTCTTCCGAAGCGTTTGAAGAAGCGTCCCAAGAGGATACGGGATTAAGCGTAAAAAGAAG
TGAAGAGATGAAGAGGTCAGCAAGAGCTAGTAGATTTAACACGGAGAAGAGAGCGAAGACAACTAAGAAGCCAAAATCAAAGCAGAAGAAGAAAAATGACAAATTTGATG
CCAATAAGCCAAAGAAACCACCTACTGCTTTCTTTTACTTTTTGGATGACTTCCGCAAGGAATTTCAAGAACAAAATCCAGATGTCAAATCAATGCGTGATGTTGGCAAG
GCATGTGGAGAGAAATGGAAAACAATGACGTATGAGGAAAAAGTACAATATTATGATATTGCCACAGAGAAACGTGCAGAGTTTGATAAAGCCATGGCAGAATATAAGAA
GAGGAAGGTAAGCTCTGCCGTGGTTTACTGA
Protein sequenceShow/hide protein sequence
MAKAKRPQKSPSTSAHDSSEAFEEASQEDTGLSVKRSEEMKRSARASRFNTEKRAKTTKKPKSKQKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGK
ACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMAEYKKRKVSSAVVY