| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6594716.1 DNA-directed RNA polymerases IV and V subunit 4, partial [Cucurbita argyrosperma subsp. sororia] | 1.2e-94 | 90.73 | Show/hide |
Query: MSEKGEKGFPVQKKPGKSSLKSSASKDGSWAFERAPLKGKDDSLSKPKKGRKVQFDAQGSVDAQINFSMKYSGKNGDLGKGGKGVNGAKASVAKEPQPLE
MSEKGEKGFPVQKKPGKSSLKSSASKD S LKGKDDSLSK KKGRKVQFDAQGSVDAQIN S+K+SGKNGDLGKGGKG+NG KASV+KE QPLE
Subjt: MSEKGEKGFPVQKKPGKSSLKSSASKDGSWAFERAPLKGKDDSLSKPKKGRKVQFDAQGSVDAQINFSMKYSGKNGDLGKGGKGVNGAKASVAKEPQPLE
Query: LKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPSSFDRGLQYAKRANHYVNTESVRPVLETLKKYGVTDSEICVIANVCPDTIDEVFAL
LKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIP+SFDRGLQYAKRANHYVNTESVRPVLETLKKYGV DSEICVIANVCPDT DEVFAL
Subjt: LKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPSSFDRGLQYAKRANHYVNTESVRPVLETLKKYGVTDSEICVIANVCPDTIDEVFAL
Query: VPSLK
VPSLK
Subjt: VPSLK
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| XP_022926857.1 DNA-directed RNA polymerases IV and V subunit 4-like isoform X1 [Cucurbita moschata] | 3.8e-93 | 89.27 | Show/hide |
Query: MSEKGEKGFPVQKKPGKSSLKSSASKDGSWAFERAPLKGKDDSLSKPKKGRKVQFDAQGSVDAQINFSMKYSGKNGDLGKGGKGVNGAKASVAKEPQPLE
MSEKGEKGFPVQKKPGKSSLKSSASKD S LKGKDDSLSK KKGRKVQFDAQGSVDAQIN S+K+SGKNGDLGKGGKG+NG KASV+KE QPLE
Subjt: MSEKGEKGFPVQKKPGKSSLKSSASKDGSWAFERAPLKGKDDSLSKPKKGRKVQFDAQGSVDAQINFSMKYSGKNGDLGKGGKGVNGAKASVAKEPQPLE
Query: LKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPSSFDRGLQYAKRANHYVNTESVRPVLETLKKYGVTDSEICVIANVCPDTIDEVFAL
LKIEQELPKNVKCQCLMDCEAAQLLQGIQDQM LLSADPTIKIP+SFDRGLQYAKRANHYVNTE VRPVLETLKKYGV DSEICVIANVCPDT DEVF+L
Subjt: LKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPSSFDRGLQYAKRANHYVNTESVRPVLETLKKYGVTDSEICVIANVCPDTIDEVFAL
Query: VPSLK
VPSLK
Subjt: VPSLK
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| XP_023003382.1 DNA-directed RNA polymerases IV and V subunit 4-like [Cucurbita maxima] | 7.6e-94 | 90.24 | Show/hide |
Query: MSEKGEKGFPVQKKPGKSSLKSSASKDGSWAFERAPLKGKDDSLSKPKKGRKVQFDAQGSVDAQINFSMKYSGKNGDLGKGGKGVNGAKASVAKEPQPLE
MSEKGEKGFPVQKKPGKSSLKS ASKD S LKGKDDSLSK KKGRKVQFDAQGSVDA IN SMK+ GKNGDLGKGGKG+NG KASV+KE QPLE
Subjt: MSEKGEKGFPVQKKPGKSSLKSSASKDGSWAFERAPLKGKDDSLSKPKKGRKVQFDAQGSVDAQINFSMKYSGKNGDLGKGGKGVNGAKASVAKEPQPLE
Query: LKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPSSFDRGLQYAKRANHYVNTESVRPVLETLKKYGVTDSEICVIANVCPDTIDEVFAL
LKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIP+SFDRGLQYAKRANHYVNTESVRPVLETLKKYGV DSEICVIANVCPDTIDEVFAL
Subjt: LKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPSSFDRGLQYAKRANHYVNTESVRPVLETLKKYGVTDSEICVIANVCPDTIDEVFAL
Query: VPSLK
VPSLK
Subjt: VPSLK
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| XP_023517145.1 DNA-directed RNA polymerases IV and V subunit 4-like isoform X1 [Cucurbita pepo subsp. pepo] | 7.6e-94 | 90.24 | Show/hide |
Query: MSEKGEKGFPVQKKPGKSSLKSSASKDGSWAFERAPLKGKDDSLSKPKKGRKVQFDAQGSVDAQINFSMKYSGKNGDLGKGGKGVNGAKASVAKEPQPLE
MSEKGEKGFPVQKKPGKSSLKSSASKD S LKGKDDSLSK KKGRKVQFDAQGSVDAQIN S+K+SGKNGDLGKGGKG+NG KASV+KE QPLE
Subjt: MSEKGEKGFPVQKKPGKSSLKSSASKDGSWAFERAPLKGKDDSLSKPKKGRKVQFDAQGSVDAQINFSMKYSGKNGDLGKGGKGVNGAKASVAKEPQPLE
Query: LKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPSSFDRGLQYAKRANHYVNTESVRPVLETLKKYGVTDSEICVIANVCPDTIDEVFAL
LKIE ELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIP+SFDRGLQYAKRANHYVNTESVRPVLETLKKYGV DSEICVIANVCPDT DEVFAL
Subjt: LKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPSSFDRGLQYAKRANHYVNTESVRPVLETLKKYGVTDSEICVIANVCPDTIDEVFAL
Query: VPSLK
VPSLK
Subjt: VPSLK
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| XP_023517147.1 DNA-directed RNA polymerases IV and V subunit 4-like isoform X2 [Cucurbita pepo subsp. pepo] | 5.5e-92 | 88.78 | Show/hide |
Query: MSEKGEKGFPVQKKPGKSSLKSSASKDGSWAFERAPLKGKDDSLSKPKKGRKVQFDAQGSVDAQINFSMKYSGKNGDLGKGGKGVNGAKASVAKEPQPLE
MSEKGEKGFPVQKKPGKSSLKSSASKD GKDDSLSK KKGRKVQFDAQGSVDAQIN S+K+SGKNGDLGKGGKG+NG KASV+KE QPLE
Subjt: MSEKGEKGFPVQKKPGKSSLKSSASKDGSWAFERAPLKGKDDSLSKPKKGRKVQFDAQGSVDAQINFSMKYSGKNGDLGKGGKGVNGAKASVAKEPQPLE
Query: LKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPSSFDRGLQYAKRANHYVNTESVRPVLETLKKYGVTDSEICVIANVCPDTIDEVFAL
LKIE ELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIP+SFDRGLQYAKRANHYVNTESVRPVLETLKKYGV DSEICVIANVCPDT DEVFAL
Subjt: LKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPSSFDRGLQYAKRANHYVNTESVRPVLETLKKYGVTDSEICVIANVCPDTIDEVFAL
Query: VPSLK
VPSLK
Subjt: VPSLK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0KH45 RPOL4c domain-containing protein | 2.3e-88 | 87.32 | Show/hide |
Query: MSEKGEKGFPVQKKPGKSSLKSSASKDGSWAFERAPLKGKDDSLSKPKKGRKVQFDAQGSVDAQINFSMKYSGKNGDLGKGGKGVNGAKASVAKEPQPLE
MSEKGEKGF VQK+P KSSLKSSA KD S LKGKDDSLSK KKGRKVQFDAQGSVDA FSMKYSGKNGDLGKGGKG N KAS+AKEPQ LE
Subjt: MSEKGEKGFPVQKKPGKSSLKSSASKDGSWAFERAPLKGKDDSLSKPKKGRKVQFDAQGSVDAQINFSMKYSGKNGDLGKGGKGVNGAKASVAKEPQPLE
Query: LKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPSSFDRGLQYAKRANHYVNTESVRPVLETLKKYGVTDSEICVIANVCPDTIDEVFAL
LKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMV LSADPTIKIP+SFDRGLQYAKRANHYVN ESVRPVLETLKKYGVTDSEICVIANVCPDT DEVFAL
Subjt: LKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPSSFDRGLQYAKRANHYVNTESVRPVLETLKKYGVTDSEICVIANVCPDTIDEVFAL
Query: VPSLK
+PSLK
Subjt: VPSLK
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| A0A1S3B2C2 DNA-directed RNA polymerases IV and V subunit 4 isoform X1 | 1.4e-88 | 87.32 | Show/hide |
Query: MSEKGEKGFPVQKKPGKSSLKSSASKDGSWAFERAPLKGKDDSLSKPKKGRKVQFDAQGSVDAQINFSMKYSGKNGDLGKGGKGVNGAKASVAKEPQPLE
MSEKGEKGF VQKKP KSSLKSSA KD S LKGKDDSLSK KKGRKVQFDAQGSVDA +FSMKYSGKNGD+GKGGKG N KASVAKEPQ LE
Subjt: MSEKGEKGFPVQKKPGKSSLKSSASKDGSWAFERAPLKGKDDSLSKPKKGRKVQFDAQGSVDAQINFSMKYSGKNGDLGKGGKGVNGAKASVAKEPQPLE
Query: LKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPSSFDRGLQYAKRANHYVNTESVRPVLETLKKYGVTDSEICVIANVCPDTIDEVFAL
LKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMV LSADPTIKIP+SFDRGLQYAKRANHYVN ESVRPVLETLKKYG+TDSEICVIANVCPDT DEVFAL
Subjt: LKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPSSFDRGLQYAKRANHYVNTESVRPVLETLKKYGVTDSEICVIANVCPDTIDEVFAL
Query: VPSLK
+PSLK
Subjt: VPSLK
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| A0A6J1EGC4 DNA-directed RNA polymerases IV and V subunit 4-like isoform X2 | 1.3e-91 | 87.8 | Show/hide |
Query: MSEKGEKGFPVQKKPGKSSLKSSASKDGSWAFERAPLKGKDDSLSKPKKGRKVQFDAQGSVDAQINFSMKYSGKNGDLGKGGKGVNGAKASVAKEPQPLE
MSEKGEKGFPVQKKPGKSSLKSSASKD GKDDSLSK KKGRKVQFDAQGSVDAQIN S+K+SGKNGDLGKGGKG+NG KASV+KE QPLE
Subjt: MSEKGEKGFPVQKKPGKSSLKSSASKDGSWAFERAPLKGKDDSLSKPKKGRKVQFDAQGSVDAQINFSMKYSGKNGDLGKGGKGVNGAKASVAKEPQPLE
Query: LKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPSSFDRGLQYAKRANHYVNTESVRPVLETLKKYGVTDSEICVIANVCPDTIDEVFAL
LKIEQELPKNVKCQCLMDCEAAQLLQGIQDQM LLSADPTIKIP+SFDRGLQYAKRANHYVNTE VRPVLETLKKYGV DSEICVIANVCPDT DEVF+L
Subjt: LKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPSSFDRGLQYAKRANHYVNTESVRPVLETLKKYGVTDSEICVIANVCPDTIDEVFAL
Query: VPSLK
VPSLK
Subjt: VPSLK
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| A0A6J1EJD9 DNA-directed RNA polymerases IV and V subunit 4-like isoform X1 | 1.8e-93 | 89.27 | Show/hide |
Query: MSEKGEKGFPVQKKPGKSSLKSSASKDGSWAFERAPLKGKDDSLSKPKKGRKVQFDAQGSVDAQINFSMKYSGKNGDLGKGGKGVNGAKASVAKEPQPLE
MSEKGEKGFPVQKKPGKSSLKSSASKD S LKGKDDSLSK KKGRKVQFDAQGSVDAQIN S+K+SGKNGDLGKGGKG+NG KASV+KE QPLE
Subjt: MSEKGEKGFPVQKKPGKSSLKSSASKDGSWAFERAPLKGKDDSLSKPKKGRKVQFDAQGSVDAQINFSMKYSGKNGDLGKGGKGVNGAKASVAKEPQPLE
Query: LKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPSSFDRGLQYAKRANHYVNTESVRPVLETLKKYGVTDSEICVIANVCPDTIDEVFAL
LKIEQELPKNVKCQCLMDCEAAQLLQGIQDQM LLSADPTIKIP+SFDRGLQYAKRANHYVNTE VRPVLETLKKYGV DSEICVIANVCPDT DEVF+L
Subjt: LKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPSSFDRGLQYAKRANHYVNTESVRPVLETLKKYGVTDSEICVIANVCPDTIDEVFAL
Query: VPSLK
VPSLK
Subjt: VPSLK
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| A0A6J1KMD1 DNA-directed RNA polymerases IV and V subunit 4-like | 3.7e-94 | 90.24 | Show/hide |
Query: MSEKGEKGFPVQKKPGKSSLKSSASKDGSWAFERAPLKGKDDSLSKPKKGRKVQFDAQGSVDAQINFSMKYSGKNGDLGKGGKGVNGAKASVAKEPQPLE
MSEKGEKGFPVQKKPGKSSLKS ASKD S LKGKDDSLSK KKGRKVQFDAQGSVDA IN SMK+ GKNGDLGKGGKG+NG KASV+KE QPLE
Subjt: MSEKGEKGFPVQKKPGKSSLKSSASKDGSWAFERAPLKGKDDSLSKPKKGRKVQFDAQGSVDAQINFSMKYSGKNGDLGKGGKGVNGAKASVAKEPQPLE
Query: LKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPSSFDRGLQYAKRANHYVNTESVRPVLETLKKYGVTDSEICVIANVCPDTIDEVFAL
LKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIP+SFDRGLQYAKRANHYVNTESVRPVLETLKKYGV DSEICVIANVCPDTIDEVFAL
Subjt: LKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPSSFDRGLQYAKRANHYVNTESVRPVLETLKKYGVTDSEICVIANVCPDTIDEVFAL
Query: VPSLK
VPSLK
Subjt: VPSLK
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O15514 DNA-directed RNA polymerase II subunit RPB4 | 1.0e-03 | 29.79 | Show/hide |
Query: QCLMDCEAAQLLQGIQDQMVLLSADPTIKIPSSFDRGLQYAKRANHYVNTESVRPVLETLKKYGVTDSEICVIANVCPDTIDEVFALVPSLKLR
+ L++ E LL+ + Q SA+ ++ F + L Y R + + N E++ V L + + E+ +AN+CP+T +E AL+PSL+ R
Subjt: QCLMDCEAAQLLQGIQDQMVLLSADPTIKIPSSFDRGLQYAKRANHYVNTESVRPVLETLKKYGVTDSEICVIANVCPDTIDEVFALVPSLKLR
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| O48890 DNA-directed RNA polymerase II subunit 4 | 1.3e-19 | 39.34 | Show/hide |
Query: KEPQPLELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPSSFDRGLQYAKRANHYVNTESVRPVLETLKKYGVTDSEICVIANVCPDT
+E ELKI E +K +CLM+CE + +L+ +Q+ +S DP ++ F++ LQY KR + Y N ++VR V E L ++ +T+ E+CV+ N+CP+T
Subjt: KEPQPLELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPSSFDRGLQYAKRANHYVNTESVRPVLETLKKYGVTDSEICVIANVCPDT
Query: IDEVFALVPSLKLRGGAKKEGA
++E A+VPSLK +G A + A
Subjt: IDEVFALVPSLKLRGGAKKEGA
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| Q54S04 DNA-directed RNA polymerase II subunit rpb4 | 1.8e-05 | 38.33 | Show/hide |
Query: SFDRGLQYAKRANHYVNTESVRPVLETLKKYGVTDSEICVIANVCPDTIDEVFALVPSLK
+F + L YA++ + Y N S++ V L K + + EI +AN+CP+ DE +L+PSLK
Subjt: SFDRGLQYAKRANHYVNTESVRPVLETLKKYGVTDSEICVIANVCPDTIDEVFALVPSLK
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| Q6DBA5 DNA-directed RNA polymerases IV and V subunit 4 | 2.5e-31 | 45.71 | Show/hide |
Query: MSEKGEKGFPVQKKPGKSSLKSSASKDGSWAFERAPLKGKDDSLSKPKKGRKVQFDAQGSVDAQ---INFSMKYSGKNGDLGKGGKGVNGAKASVAKEPQ
MSEKG KG KSSLK SKDG GKD S +K KKGRK+ FD Q + A +N S K GK K+S
Subjt: MSEKGEKGFPVQKKPGKSSLKSSASKDGSWAFERAPLKGKDDSLSKPKKGRKVQFDAQGSVDAQ---INFSMKYSGKNGDLGKGGKGVNGAKASVAKEPQ
Query: PLELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPSSFDRGLQYAKRANHYVNTESVRPVLETLKKYGVTDSEICVIANVCPDTIDEV
ELK +LP+N +C+MDCEA Q+L GI+ Q+V LS DP+IKIP S+DR L Y + HY N +SVR VLE LK YG++D E+CVIAN +++DEV
Subjt: PLELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPSSFDRGLQYAKRANHYVNTESVRPVLETLKKYGVTDSEICVIANVCPDTIDEV
Query: FALVPSLKLR
A +PSLK +
Subjt: FALVPSLKLR
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| Q9D7M8 DNA-directed RNA polymerase II subunit RPB4 | 1.0e-03 | 29.79 | Show/hide |
Query: QCLMDCEAAQLLQGIQDQMVLLSADPTIKIPSSFDRGLQYAKRANHYVNTESVRPVLETLKKYGVTDSEICVIANVCPDTIDEVFALVPSLKLR
+ L++ E LL+ + Q SA+ ++ F + L Y R + + N E++ V L + + E+ +AN+CP+T +E AL+PSL+ R
Subjt: QCLMDCEAAQLLQGIQDQMVLLSADPTIKIPSSFDRGLQYAKRANHYVNTESVRPVLETLKKYGVTDSEICVIANVCPDTIDEVFALVPSLKLR
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