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Spg011632 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg011632
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 4-like
Genome locationscaffold1:1762619..1763447
RNA-Seq ExpressionSpg011632
SyntenySpg011632
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0032196 - transposition (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033299.1 uncharacterized protein E6C27_scaffold845G001100 [Cucumis melo var. makuwa]2.5e-0660Show/hide
Query:  NIYHEFKVTSVYEKAWRGRELALTSIRGSPEASYALIPAFSAALIQKAPG
        NI+H   ++  Y+KAWRGRE+AL SIRG+PE SYA++ AFS ALI+  PG
Subjt:  NIYHEFKVTSVYEKAWRGRELALTSIRGSPEASYALIPAFSAALIQKAPG

KAA0064137.1 MuDRA-like transposase [Cucumis melo var. makuwa]3.2e-0661.22Show/hide
Query:  IYHEFKVTSVYEKAWRGRELALTSIRGSPEASYALIPAFSAALIQKAPG
        I+H+  V+  Y+KAWRGRE+AL SIRG+PE SYA++ AFS ALI+  PG
Subjt:  IYHEFKVTSVYEKAWRGRELALTSIRGSPEASYALIPAFSAALIQKAPG

TYK22587.1 uncharacterized protein E5676_scaffold195G00040 [Cucumis melo var. makuwa]7.2e-0659.18Show/hide
Query:  IYHEFKVTSVYEKAWRGRELALTSIRGSPEASYALIPAFSAALIQKAPG
        I+H   ++  Y+KAWRGRE+AL SIRG+PE SYA++ AFS ALI+  PG
Subjt:  IYHEFKVTSVYEKAWRGRELALTSIRGSPEASYALIPAFSAALIQKAPG

XP_016902696.1 PREDICTED: uncharacterized protein LOC107991824 [Cucumis melo]7.2e-0659.18Show/hide
Query:  IYHEFKVTSVYEKAWRGRELALTSIRGSPEASYALIPAFSAALIQKAPG
        I+H   ++  Y+KAWRGRE+AL SIRG+PE SYA++ AFS ALI+  PG
Subjt:  IYHEFKVTSVYEKAWRGRELALTSIRGSPEASYALIPAFSAALIQKAPG

XP_038904299.1 uncharacterized protein LOC120090654 [Benincasa hispida]2.9e-0738.37Show/hide
Query:  MSMSDMTILFDGRWDENNIYHEFK--------------------VTSVYEKAWRGRELALTSIRGSPEASYALIPAFSAALIQKAP
        M++    ++FDGRWDEN+ YH+F+                    +  +Y+KAW+G E+AL S+RG+ E+SYA +  F AALI+  P
Subjt:  MSMSDMTILFDGRWDENNIYHEFK--------------------VTSVYEKAWRGRELALTSIRGSPEASYALIPAFSAALIQKAP

TrEMBL top hitse value%identityAlignment
A0A1S4E392 uncharacterized protein LOC1079918243.5e-0659.18Show/hide
Query:  IYHEFKVTSVYEKAWRGRELALTSIRGSPEASYALIPAFSAALIQKAPG
        I+H   ++  Y+KAWRGRE+AL SIRG+PE SYA++ AFS ALI+  PG
Subjt:  IYHEFKVTSVYEKAWRGRELALTSIRGSPEASYALIPAFSAALIQKAPG

A0A5A7SVT9 CCHC-type domain-containing protein1.2e-0660Show/hide
Query:  NIYHEFKVTSVYEKAWRGRELALTSIRGSPEASYALIPAFSAALIQKAPG
        NI+H   ++  Y+KAWRGRE+AL SIRG+PE SYA++ AFS ALI+  PG
Subjt:  NIYHEFKVTSVYEKAWRGRELALTSIRGSPEASYALIPAFSAALIQKAPG

A0A5A7VAU3 MuDRA-like transposase1.6e-0661.22Show/hide
Query:  IYHEFKVTSVYEKAWRGRELALTSIRGSPEASYALIPAFSAALIQKAPG
        I+H+  V+  Y+KAWRGRE+AL SIRG+PE SYA++ AFS ALI+  PG
Subjt:  IYHEFKVTSVYEKAWRGRELALTSIRGSPEASYALIPAFSAALIQKAPG

A0A5D3CDB8 Uncharacterized protein5.9e-0659.18Show/hide
Query:  IYHEFKVTSVYEKAWRGRELALTSIRGSPEASYALIPAFSAALIQKAPG
        I+H   ++  Y+KAWRGRE+AL SIRG+PE SYA++ AFS ALI+  PG
Subjt:  IYHEFKVTSVYEKAWRGRELALTSIRGSPEASYALIPAFSAALIQKAPG

A0A5D3DFW1 Uncharacterized protein3.5e-0659.18Show/hide
Query:  IYHEFKVTSVYEKAWRGRELALTSIRGSPEASYALIPAFSAALIQKAPG
        I+H   ++  Y+KAWRGRE+AL SIRG+PE SYA++ AFS ALI+  PG
Subjt:  IYHEFKVTSVYEKAWRGRELALTSIRGSPEASYALIPAFSAALIQKAPG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCATGTCGGACATGACTATTCTCTTCGATGGGAGGTGGGACGAAAACAACATATACCATGAGTTTAAGGTCACTAGTGTTTACGAAAAGGCTTGGAGGGGTCGAGA
ACTTGCACTCACGTCTATTAGGGGTTCGCCAGAAGCTTCATATGCATTAATCCCAGCATTTTCAGCTGCCCTAATTCAGAAAGCACCAGGACGAGAGGGGTCGAGCTTGA
AGGGGAGTAAATGGACGGAGGTTGAAGGGAGAAGACGAACAGACGAAATGGACAGGGCGAAAGGGAATGTAACGTCTTCTAGTGTAGGGTTTTCAATTCAAAATGGATGG
GAGGAAAATTATCTTGGCAGTCGTAAGGTCACTCTTGTGGGCAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCATGTCGGACATGACTATTCTCTTCGATGGGAGGTGGGACGAAAACAACATATACCATGAGTTTAAGGTCACTAGTGTTTACGAAAAGGCTTGGAGGGGTCGAGA
ACTTGCACTCACGTCTATTAGGGGTTCGCCAGAAGCTTCATATGCATTAATCCCAGCATTTTCAGCTGCCCTAATTCAGAAAGCACCAGGACGAGAGGGGTCGAGCTTGA
AGGGGAGTAAATGGACGGAGGTTGAAGGGAGAAGACGAACAGACGAAATGGACAGGGCGAAAGGGAATGTAACGTCTTCTAGTGTAGGGTTTTCAATTCAAAATGGATGG
GAGGAAAATTATCTTGGCAGTCGTAAGGTCACTCTTGTGGGCAGGTGA
Protein sequenceShow/hide protein sequence
MSMSDMTILFDGRWDENNIYHEFKVTSVYEKAWRGRELALTSIRGSPEASYALIPAFSAALIQKAPGREGSSLKGSKWTEVEGRRRTDEMDRAKGNVTSSSVGFSIQNGW
EENYLGSRKVTLVGR