; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg011675 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg011675
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRNA polymerase II transcription factor B subunit 2
Genome locationscaffold1:3149091..3156873
RNA-Seq ExpressionSpg011675
SyntenySpg011675
Gene Ontology termsGO:0006289 - nucleotide-excision repair (biological process)
GO:0070816 - phosphorylation of RNA polymerase II C-terminal domain (biological process)
GO:0000439 - transcription factor TFIIH core complex (cellular component)
GO:0005675 - transcription factor TFIIH holo complex (cellular component)
GO:0001671 - ATPase activator activity (molecular function)
GO:0003690 - double-stranded DNA binding (molecular function)
InterPro domainsIPR004598 - Transcription factor TFIIH subunit p52/Tfb2
IPR040662 - Transcription factor Tfb2, C-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604444.1 General transcription and DNA repair factor IIH subunit TFB2, partial [Cucurbita argyrosperma subsp. sororia]3.9e-17273.42Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLD+LYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKS+EEWVLPDGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGLLPFCIHQDSACYLFAFIKIQVQVDDYSSSIKRSRSWIQCFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTES
        +LNPTFQANLQKLLIHG +       S         I V++ +       +    +CFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKETPRLTES
Subjt:  RLNPTFQANLQKLLIHGLLPFCIHQDSACYLFAFIKIQVQVDDYSSSIKRSRSWIQCFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTES

Query:  GFQFL--------------------ERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSS
        GFQFL                    ERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSS
Subjt:  GFQFL--------------------ERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSS

Query:  SRK-----------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNR
        SRK                                                           QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNR
Subjt:  SRK-----------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNR

Query:  VDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        VDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSK +RLVVKADIHTHMREHLRRQK
Subjt:  VDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

XP_004134713.1 general transcription and DNA repair factor IIH subunit TFB2 isoform X1 [Cucumis sativus]8.2e-17072.55Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLD+LYENAFICEAILRSLPPLAKKFVLQMLYID PV+AKS+EEWVLPDGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGLLPFCIHQDSACYLFAFIKIQVQVDDYSSSIKRSRSWIQCFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTES
        RLNPTFQANLQKLLIHG +       S         I V++         +    +CFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKE PRLTES
Subjt:  RLNPTFQANLQKLLIHGLLPFCIHQDSACYLFAFIKIQVQVDDYSSSIKRSRSWIQCFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTES

Query:  GFQFL--------------------ERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSS
        GFQFL                    ER VDPADLISFLLELSFHVTGEAYDIDTL++EQRYAIKDLADLGLVKLQQGRK+SWFIPTKLATNLSMSLADSS
Subjt:  GFQFL--------------------ERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSS

Query:  SRK-----------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNR
        SRK                                                           QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNR
Subjt:  SRK-----------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNR

Query:  VDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        VDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKN+RLVVKADIHTHMREHLRRQK
Subjt:  VDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

XP_022925808.1 RNA polymerase II transcription factor B subunit 2 [Cucurbita moschata]2.1e-17072.98Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLD+LY NAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKS+EEWVLPDGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGLLPFCIHQDSACYLFAFIKIQVQVDDYSSSIKRSRSWIQCFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTES
        +LNPTFQANLQKLLI G +       S         I V++ +       +    +CFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKETPRLTES
Subjt:  RLNPTFQANLQKLLIHGLLPFCIHQDSACYLFAFIKIQVQVDDYSSSIKRSRSWIQCFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTES

Query:  GFQFL--------------------ERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSS
        GFQFL                    ERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSS
Subjt:  GFQFL--------------------ERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSS

Query:  SRK-----------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNR
        SRK                                                           QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNR
Subjt:  SRK-----------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNR

Query:  VDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        VDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSK +RLVVKADIHTHMREHLRRQK
Subjt:  VDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

XP_022977542.1 RNA polymerase II transcription factor B subunit 2 [Cucurbita maxima]2.5e-17173.2Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLD+LYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKS+EEWVLPDGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGLLPFCIHQDSACYLFAFIKIQVQVDDYSSSIKRSRSWIQCFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTES
        +LNPTFQANLQKLLIHG +       S         I V++ +       +    +CFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKETPRLTES
Subjt:  RLNPTFQANLQKLLIHGLLPFCIHQDSACYLFAFIKIQVQVDDYSSSIKRSRSWIQCFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTES

Query:  GFQFL--------------------ERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSS
        GFQFL                    ER VDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSS
Subjt:  GFQFL--------------------ERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSS

Query:  SRK-----------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNR
        SRK                                                           QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNR
Subjt:  SRK-----------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNR

Query:  VDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        VDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSK +RLVVKADIHTHMREHLRRQK
Subjt:  VDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

XP_023543805.1 RNA polymerase II transcription factor B subunit 2 [Cucurbita pepo subsp. pepo]3.9e-17273.42Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLD+LYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKS+EEWVLPDGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGLLPFCIHQDSACYLFAFIKIQVQVDDYSSSIKRSRSWIQCFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTES
        +LNPTFQANLQKLLIHG +       S         I V++ +       +    +CFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKETPRLTES
Subjt:  RLNPTFQANLQKLLIHGLLPFCIHQDSACYLFAFIKIQVQVDDYSSSIKRSRSWIQCFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTES

Query:  GFQFL--------------------ERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSS
        GFQFL                    ERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSS
Subjt:  GFQFL--------------------ERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSS

Query:  SRK-----------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNR
        SRK                                                           QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNR
Subjt:  SRK-----------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNR

Query:  VDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        VDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSK +RLVVKADIHTHMREHLRRQK
Subjt:  VDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

TrEMBL top hitse value%identityAlignment
A0A0A0KK55 RNA polymerase II transcription factor B subunit 24.0e-17072.55Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLD+LYENAFICEAILRSLPPLAKKFVLQMLYID PV+AKS+EEWVLPDGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGLLPFCIHQDSACYLFAFIKIQVQVDDYSSSIKRSRSWIQCFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTES
        RLNPTFQANLQKLLIHG +       S         I V++         +    +CFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKE PRLTES
Subjt:  RLNPTFQANLQKLLIHGLLPFCIHQDSACYLFAFIKIQVQVDDYSSSIKRSRSWIQCFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTES

Query:  GFQFL--------------------ERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSS
        GFQFL                    ER VDPADLISFLLELSFHVTGEAYDIDTL++EQRYAIKDLADLGLVKLQQGRK+SWFIPTKLATNLSMSLADSS
Subjt:  GFQFL--------------------ERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSS

Query:  SRK-----------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNR
        SRK                                                           QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNR
Subjt:  SRK-----------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNR

Query:  VDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        VDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKN+RLVVKADIHTHMREHLRRQK
Subjt:  VDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

A0A5A7UBE2 RNA polymerase II transcription factor B subunit 21.2e-15567.81Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLD+LYENAFICEAILRSLPPLAKKFVLQMLYIDAPV+AKS+EEWVLPDGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGLLPFCIHQDSACYLFAFIKIQVQVDDYSSSIKRSRSWIQCFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQ-----------
        RLNPTFQANLQKLLIHG +       S         I V++         +    +CFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQ           
Subjt:  RLNPTFQANLQKLLIHGLLPFCIHQDSACYLFAFIKIQVQVDDYSSSIKRSRSWIQCFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQ-----------

Query:  --------------RDKETPRLTESGFQFL--------------------ERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQ
                      RDKE PRLTESGFQFL                    ER VDPADLISFLLELSFHVTGEAYDIDTL++EQRYAIKDLADLGLVKLQ
Subjt:  --------------RDKETPRLTESGFQFL--------------------ERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQ

Query:  QGRKDSWFIPTKLATNLSMSLADSSSRK-----------------------------------------------------------QIVTFLQQNAHPR
        QGRK+SWFIPTKLATNLSMSLADSSSRK                                                           QIVTFLQQNAHPR
Subjt:  QGRKDSWFIPTKLATNLSMSLADSSSRK-----------------------------------------------------------QIVTFLQQNAHPR

Query:  VAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRL
        VAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKN+RL
Subjt:  VAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRL

A0A6J1CK16 RNA polymerase II transcription factor B subunit 29.4e-16466.93Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLD LYENAFICEAILRSLPPLAKKFVLQMLYI+APV AKS+EEWVL DGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGLLPFCIHQDSACYLFAFIKIQVQVDDYSSSIKRSRSWIQCFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTES
        RLNPTFQANLQKLLI+G +       S         I V++         +    +CFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKE PRLTES
Subjt:  RLNPTFQANLQKLLIHGLLPFCIHQDSACYLFAFIKIQVQVDDYSSSIKRSRSWIQCFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTES

Query:  GFQFL--------------------ERDVDPADLISFLLELSFHVTGE----------------------------------------AYDIDTLTEEQR
        GFQFL                    ER VDPADLISFLLELSFHVTGE                                        AYDIDTLTEEQR
Subjt:  GFQFL--------------------ERDVDPADLISFLLELSFHVTGE----------------------------------------AYDIDTLTEEQR

Query:  YAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK---------------------------------------------------------
        YAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK                                                         
Subjt:  YAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK---------------------------------------------------------

Query:  --QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
          QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKAD+HTHMREHLRRQK
Subjt:  --QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

A0A6J1EGA7 RNA polymerase II transcription factor B subunit 21.0e-17072.98Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLD+LY NAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKS+EEWVLPDGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGLLPFCIHQDSACYLFAFIKIQVQVDDYSSSIKRSRSWIQCFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTES
        +LNPTFQANLQKLLI G +       S         I V++ +       +    +CFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKETPRLTES
Subjt:  RLNPTFQANLQKLLIHGLLPFCIHQDSACYLFAFIKIQVQVDDYSSSIKRSRSWIQCFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTES

Query:  GFQFL--------------------ERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSS
        GFQFL                    ERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSS
Subjt:  GFQFL--------------------ERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSS

Query:  SRK-----------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNR
        SRK                                                           QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNR
Subjt:  SRK-----------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNR

Query:  VDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        VDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSK +RLVVKADIHTHMREHLRRQK
Subjt:  VDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

A0A6J1IIT5 RNA polymerase II transcription factor B subunit 21.2e-17173.2Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLD+LYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKS+EEWVLPDGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGLLPFCIHQDSACYLFAFIKIQVQVDDYSSSIKRSRSWIQCFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTES
        +LNPTFQANLQKLLIHG +       S         I V++ +       +    +CFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKETPRLTES
Subjt:  RLNPTFQANLQKLLIHGLLPFCIHQDSACYLFAFIKIQVQVDDYSSSIKRSRSWIQCFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTES

Query:  GFQFL--------------------ERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSS
        GFQFL                    ER VDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSS
Subjt:  GFQFL--------------------ERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSS

Query:  SRK-----------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNR
        SRK                                                           QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNR
Subjt:  SRK-----------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNR

Query:  VDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        VDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSK +RLVVKADIHTHMREHLRRQK
Subjt:  VDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

SwissProt top hitse value%identityAlignment
O70422 General transcription factor IIH subunit 42.1e-2724.67Show/hide
Query:  KNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTYRLNPTFQA
        +N  + +  L    LD+LY +   C A+ R LP LAK +V++ML+++ P+   ++  WV  +     + +   L  LR++             LNP F+ 
Subjt:  KNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTYRLNPTFQA

Query:  NLQKLLIHGLLPFCIHQDSACYLFAFIKIQVQVDDYSSSIKRSRSWIQCFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKETPRLTESGFQFL--
        NL+  L+ G   +    D    L           D  S  K +    +  L  ++ S  A    +++  +    Q GL+ S    E P +T +GFQFL  
Subjt:  NLQKLLIHGLLPFCIHQDSACYLFAFIKIQVQVDDYSSSIKRSRSWIQCFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKETPRLTESGFQFL--

Query:  ------------------ERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS--------------
                           R +D  +++SFL +LSF   G+ Y ++ +++     ++ L + GLV  Q+ RK   + PT+LA NLS              
Subjt:  ------------------ERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS--------------

Query:  -----------------------------------------------MSLADSSSRKQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITP
                                                        ++A   + +QI+ FL+  AHP + ++ P +P  +TDQIRLWE + +R+  T 
Subjt:  -----------------------------------------------MSLADSSSRKQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITP

Query:  AHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
           Y++F S+  FE    +ARE   L++E+S    +VV    H+ ++   +RQK
Subjt:  AHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

P60027 General transcription factor IIH subunit 49.5e-2824.57Show/hide
Query:  QVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTYRL
        +V +  +N  + +  L    LD+LY +   C A+ R LP LAK +V++ML+++ P+   ++  WV  +     + +   L  LR++             L
Subjt:  QVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTYRL

Query:  NPTFQANLQKLLIHGLLPFCIHQDSACYLFAFIKIQVQVDDYSSSIKRSRSWIQCFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKETPRLTESG
        NP F+ NL+  L+ G   +    D    L           D  S  K +    +  L  ++ S  A    +++  +    Q GL+ S    E P +T +G
Subjt:  NPTFQANLQKLLIHGLLPFCIHQDSACYLFAFIKIQVQVDDYSSSIKRSRSWIQCFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKETPRLTESG

Query:  FQFL--------------------ERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS--------
        FQFL                     R +D  +++SFL +LSF   G+ Y ++ +++     ++ L + GLV  Q+ RK   + PT+LA NLS        
Subjt:  FQFL--------------------ERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS--------

Query:  -----------------------------------------------------MSLADSSSRKQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLN
                                                              ++A   + +QI+ FL+  AHP + ++ P +P  +TDQIRLWE + +
Subjt:  -----------------------------------------------------MSLADSSSRKQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLN

Query:  RVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        R+  T    Y++F S+  FE    +ARE   L++E+S    +VV    H+ ++   +RQK
Subjt:  RVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

Q54C29 General transcription factor IIH subunit 43.7e-2422.86Show/hide
Query:  VASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFI-------------------------
        +ASL +  L++LY++ + C+AILRSLPP +K+++L+ML +D        ++W     + ++K ++ +L  L++                           
Subjt:  VASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFI-------------------------

Query:  --ETADRKRETTYRLNPTFQANLQKLLIHGLLPFCIHQDSACYLFAFIKIQ---VQVDDYSSSIKRSRSWIQCFLLQLINSGQAEKPSNISSSVMKVFQK
          +   ++ E T RLNP FQ N+++ L+        +  S       IK       +DD  S  K     +  FL     S    +PS + S ++     
Subjt:  --ETADRKRETTYRLNPTFQANLQKLLIHGLLPFCIHQDSACYLFAFIKIQ---VQVDDYSSSIKRSRSWIQCFLLQLINSGQAEKPSNISSSVMKVFQK

Query:  GLLSQRDKETPRLTESGFQFLERDV------------------------DPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKD
          L++++ +   +T  GF+FL +DV                           DL+SFL  LSF   G  Y +  L+E+Q+  +  L   GL+ +   R D
Subjt:  GLLSQRDKETPRLTESGFQFLERDV------------------------DPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKD

Query:  S--WFIPTK----LATNLSMSLADSSSRK------------------------------------------------------------------QIVTF
        S   F PT+    L T  ++SL  S S +                                                                  QI+ F
Subjt:  S--WFIPTK----LATNLSMSLADSSSRK------------------------------------------------------------------QIVTF

Query:  LQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRR
        ++ N+HP  A     +P+ V +QI LWE++ NR+  T +  Y+ FP+ + + A   +A+E +  +W       LVVK + +  +R  +++
Subjt:  LQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRR

Q680U9 General transcription and DNA repair factor IIH subunit TFB22.6e-14260.22Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPA+KLDKLY N FICEAILRSLPPLAKK+VLQMLYID PV A  +EEWVL DG SK++VAIDRLIQLR+F E +DRKR T+Y
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIH-GLLP-FCIHQDSACYLFAFIKIQVQVDDYSSSIKRSRSWIQCFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLT
         LNPTFQ NLQK +I  G+LP   ++ D+A  L +  +++             + W +CFLLQLINSGQ EK + ISSS+MK+FQ+GLLSQRDK+ PRLT
Subjt:  RLNPTFQANLQKLLIH-GLLP-FCIHQDSACYLFAFIKIQVQVDDYSSSIKRSRSWIQCFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLT

Query:  ESGFQFL--------------------ERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLAD
        ESGFQFL                    ERDVDPADLISFLLELSFHVTG+AY+++TLTE Q   +KDLADLGLVKLQQGRKDSWFIPTKLATNLS+SLAD
Subjt:  ESGFQFL--------------------ERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLAD

Query:  SSSRK-----------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDL
        SS+RK                                                           QI+TFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL
Subjt:  SSSRK-----------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDL

Query:  NRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ
         R+++T AHFYDEFPS++VFEAACD+AREW GLLWEDSK MRLVVK+++H  MRE L  Q
Subjt:  NRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ

Q92759 General transcription factor IIH subunit 49.5e-2824.57Show/hide
Query:  QVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTYRL
        +V +  +N  + +  L    LD+LY +   C A+ R LP LAK +V++ML+++ P+   ++  WV  +     + +   L  LR++             L
Subjt:  QVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTYRL

Query:  NPTFQANLQKLLIHGLLPFCIHQDSACYLFAFIKIQVQVDDYSSSIKRSRSWIQCFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKETPRLTESG
        NP F+ NL+  L+ G   +    D    L           D  S  K +    +  L  ++ S  A    +++  +    Q GL+ S    E P +T +G
Subjt:  NPTFQANLQKLLIHGLLPFCIHQDSACYLFAFIKIQVQVDDYSSSIKRSRSWIQCFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKETPRLTESG

Query:  FQFL--------------------ERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS--------
        FQFL                     R +D  +++SFL +LSF   G+ Y ++ +++     ++ L + GLV  Q+ RK   + PT+LA NLS        
Subjt:  FQFL--------------------ERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS--------

Query:  -----------------------------------------------------MSLADSSSRKQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLN
                                                              ++A   + +QI+ FL+  AHP + ++ P +P  +TDQIRLWE + +
Subjt:  -----------------------------------------------------MSLADSSSRKQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLN

Query:  RVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        R+  T    Y++F S+  FE    +ARE   L++E+S    +VV    H+ ++   +RQK
Subjt:  RVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

Arabidopsis top hitse value%identityAlignment
AT4G17020.1 transcription factor-related1.8e-14360.22Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPA+KLDKLY N FICEAILRSLPPLAKK+VLQMLYID PV A  +EEWVL DG SK++VAIDRLIQLR+F E +DRKR T+Y
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIH-GLLP-FCIHQDSACYLFAFIKIQVQVDDYSSSIKRSRSWIQCFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLT
         LNPTFQ NLQK +I  G+LP   ++ D+A  L +  +++             + W +CFLLQLINSGQ EK + ISSS+MK+FQ+GLLSQRDK+ PRLT
Subjt:  RLNPTFQANLQKLLIH-GLLP-FCIHQDSACYLFAFIKIQVQVDDYSSSIKRSRSWIQCFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLT

Query:  ESGFQFL--------------------ERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLAD
        ESGFQFL                    ERDVDPADLISFLLELSFHVTG+AY+++TLTE Q   +KDLADLGLVKLQQGRKDSWFIPTKLATNLS+SLAD
Subjt:  ESGFQFL--------------------ERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLAD

Query:  SSSRK-----------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDL
        SS+RK                                                           QI+TFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL
Subjt:  SSSRK-----------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDL

Query:  NRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ
         R+++T AHFYDEFPS++VFEAACD+AREW GLLWEDSK MRLVVK+++H  MRE L  Q
Subjt:  NRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ

AT4G17020.2 transcription factor-related1.8e-14360.22Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPA+KLDKLY N FICEAILRSLPPLAKK+VLQMLYID PV A  +EEWVL DG SK++VAIDRLIQLR+F E +DRKR T+Y
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIH-GLLP-FCIHQDSACYLFAFIKIQVQVDDYSSSIKRSRSWIQCFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLT
         LNPTFQ NLQK +I  G+LP   ++ D+A  L +  +++             + W +CFLLQLINSGQ EK + ISSS+MK+FQ+GLLSQRDK+ PRLT
Subjt:  RLNPTFQANLQKLLIH-GLLP-FCIHQDSACYLFAFIKIQVQVDDYSSSIKRSRSWIQCFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLT

Query:  ESGFQFL--------------------ERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLAD
        ESGFQFL                    ERDVDPADLISFLLELSFHVTG+AY+++TLTE Q   +KDLADLGLVKLQQGRKDSWFIPTKLATNLS+SLAD
Subjt:  ESGFQFL--------------------ERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLAD

Query:  SSSRK-----------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDL
        SS+RK                                                           QI+TFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL
Subjt:  SSSRK-----------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDL

Query:  NRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ
         R+++T AHFYDEFPS++VFEAACD+AREW GLLWEDSK MRLVVK+++H  MRE L  Q
Subjt:  NRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ

AT4G17020.3 transcription factor-related1.8e-14360.22Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPA+KLDKLY N FICEAILRSLPPLAKK+VLQMLYID PV A  +EEWVL DG SK++VAIDRLIQLR+F E +DRKR T+Y
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIH-GLLP-FCIHQDSACYLFAFIKIQVQVDDYSSSIKRSRSWIQCFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLT
         LNPTFQ NLQK +I  G+LP   ++ D+A  L +  +++             + W +CFLLQLINSGQ EK + ISSS+MK+FQ+GLLSQRDK+ PRLT
Subjt:  RLNPTFQANLQKLLIH-GLLP-FCIHQDSACYLFAFIKIQVQVDDYSSSIKRSRSWIQCFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLT

Query:  ESGFQFL--------------------ERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLAD
        ESGFQFL                    ERDVDPADLISFLLELSFHVTG+AY+++TLTE Q   +KDLADLGLVKLQQGRKDSWFIPTKLATNLS+SLAD
Subjt:  ESGFQFL--------------------ERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLAD

Query:  SSSRK-----------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDL
        SS+RK                                                           QI+TFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL
Subjt:  SSSRK-----------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDL

Query:  NRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ
         R+++T AHFYDEFPS++VFEAACD+AREW GLLWEDSK MRLVVK+++H  MRE L  Q
Subjt:  NRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCAAGTGAAGATCATAGCGAAGAATTTTATGGACATGGTGGCCTCCTTGCCCGCCATGAAGCTCGACAAGCTCTATGAGAATGCATTCATCTGCGAAGCCATTCT
CAGGTCACTTCCACCACTGGCCAAGAAGTTTGTTTTACAAATGTTATACATTGATGCTCCAGTAACAGCCAAGTCCATAGAGGAGTGGGTGCTTCCAGATGGAGTCTCAA
AGTATAAGGTTGCCATTGATCGATTGATTCAATTGAGAGTATTTATTGAGACTGCGGATAGGAAAAGAGAAACAACCTACAGGCTAAATCCAACGTTCCAAGCAAACCTC
CAAAAGCTTTTAATACATGGCTTGCTACCTTTTTGCATTCATCAAGATTCAGCTTGCTACCTTTTTGCATTCATCAAGATTCAGGTTCAAGTAGATGATTACTCATCTTC
TATAAAGAGAAGCCGATCCTGGATTCAGTGCTTCTTGCTGCAATTGATAAACTCAGGCCAAGCAGAGAAGCCGTCAAATATTAGTTCTTCTGTGATGAAAGTTTTCCAGA
AAGGGCTTTTAAGTCAGAGGGATAAAGAAACTCCACGATTAACTGAGAGTGGTTTCCAGTTCTTGGAGCGAGATGTGGATCCTGCAGATTTGATTTCTTTTCTGCTAGAG
CTTAGTTTTCATGTGACAGGAGAGGCTTACGACATTGATACATTGACAGAAGAACAGAGATATGCTATCAAGGACCTTGCTGATCTGGGACTAGTTAAGCTTCAGCAGGG
TAGAAAAGACAGTTGGTTCATACCTACTAAATTAGCCACAAATCTTTCAATGAGTTTGGCAGATTCTTCTTCAAGGAAACAGATAGTTACTTTTCTACAGCAAAATGCAC
ATCCTCGTGTTGCGGAGAGAATACCATCAGTCCCTGAAAATGTCACGGATCAGATTAGGTTATGGGAATCAGATCTTAATAGGGTCGATATTACTCCTGCACATTTTTAC
GACGAATTCCCTTCTAGGGAAGTTTTCGAGGCTGCTTGCGACTACGCACGAGAATGGAATGGGTTGCTATGGGAGGACTCGAAAAACATGCGGTTGGTCGTGAAGGCAGA
CATACACACACATATGCGGGAACATCTTCGCCGTCAAAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTCAAGTGAAGATCATAGCGAAGAATTTTATGGACATGGTGGCCTCCTTGCCCGCCATGAAGCTCGACAAGCTCTATGAGAATGCATTCATCTGCGAAGCCATTCT
CAGGTCACTTCCACCACTGGCCAAGAAGTTTGTTTTACAAATGTTATACATTGATGCTCCAGTAACAGCCAAGTCCATAGAGGAGTGGGTGCTTCCAGATGGAGTCTCAA
AGTATAAGGTTGCCATTGATCGATTGATTCAATTGAGAGTATTTATTGAGACTGCGGATAGGAAAAGAGAAACAACCTACAGGCTAAATCCAACGTTCCAAGCAAACCTC
CAAAAGCTTTTAATACATGGCTTGCTACCTTTTTGCATTCATCAAGATTCAGCTTGCTACCTTTTTGCATTCATCAAGATTCAGGTTCAAGTAGATGATTACTCATCTTC
TATAAAGAGAAGCCGATCCTGGATTCAGTGCTTCTTGCTGCAATTGATAAACTCAGGCCAAGCAGAGAAGCCGTCAAATATTAGTTCTTCTGTGATGAAAGTTTTCCAGA
AAGGGCTTTTAAGTCAGAGGGATAAAGAAACTCCACGATTAACTGAGAGTGGTTTCCAGTTCTTGGAGCGAGATGTGGATCCTGCAGATTTGATTTCTTTTCTGCTAGAG
CTTAGTTTTCATGTGACAGGAGAGGCTTACGACATTGATACATTGACAGAAGAACAGAGATATGCTATCAAGGACCTTGCTGATCTGGGACTAGTTAAGCTTCAGCAGGG
TAGAAAAGACAGTTGGTTCATACCTACTAAATTAGCCACAAATCTTTCAATGAGTTTGGCAGATTCTTCTTCAAGGAAACAGATAGTTACTTTTCTACAGCAAAATGCAC
ATCCTCGTGTTGCGGAGAGAATACCATCAGTCCCTGAAAATGTCACGGATCAGATTAGGTTATGGGAATCAGATCTTAATAGGGTCGATATTACTCCTGCACATTTTTAC
GACGAATTCCCTTCTAGGGAAGTTTTCGAGGCTGCTTGCGACTACGCACGAGAATGGAATGGGTTGCTATGGGAGGACTCGAAAAACATGCGGTTGGTCGTGAAGGCAGA
CATACACACACATATGCGGGAACATCTTCGCCGTCAAAAATAG
Protein sequenceShow/hide protein sequence
MPQVKIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTAKSIEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTYRLNPTFQANL
QKLLIHGLLPFCIHQDSACYLFAFIKIQVQVDDYSSSIKRSRSWIQCFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKETPRLTESGFQFLERDVDPADLISFLLE
LSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFY
DEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK