; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg011677 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg011677
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1
Genome locationscaffold1:2849153..2852213
RNA-Seq ExpressionSpg011677
SyntenySpg011677
Gene Ontology termsNA
InterPro domainsIPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142284.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Momordica charantia]6.3e-3992.78Show/hide
Query:  MSSAAAMAARSALRSTLARATVSGRLTNGAKVKSPRSPFGIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEGQ
        MS+AAAMAARSALRST+ARA +SGRLT GAKVKS RSPFG+PKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEGQ
Subjt:  MSSAAAMAARSALRSTLARATVSGRLTNGAKVKSPRSPFGIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEGQ

XP_022142288.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X4 [Momordica charantia]2.4e-3892.71Show/hide
Query:  MSSAAAMAARSALRSTLARATVSGRLTNGAKVKSPRSPFGIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG
        MS+AAAMAARSALRST+ARA +SGRLT GAKVKS RSPFG+PKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG
Subjt:  MSSAAAMAARSALRSTLARATVSGRLTNGAKVKSPRSPFGIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG

XP_022926141.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Cucurbita moschata]1.8e-3893.81Show/hide
Query:  MSSAAAMAARSALRSTLARATVSGRLTNGAKVKSPRSPFGIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEGQ
        MSSAAAMAARSA RSTLARAT+S RLTNGAKVKSP SPF IPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWT EGQ
Subjt:  MSSAAAMAARSALRSTLARATVSGRLTNGAKVKSPRSPFGIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEGQ

XP_022926145.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X5 [Cucurbita moschata]7.0e-3893.75Show/hide
Query:  MSSAAAMAARSALRSTLARATVSGRLTNGAKVKSPRSPFGIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG
        MSSAAAMAARSA RSTLARAT+S RLTNGAKVKSP SPF IPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWT EG
Subjt:  MSSAAAMAARSALRSTLARATVSGRLTNGAKVKSPRSPFGIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG

XP_022978782.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita maxima]7.0e-3893.75Show/hide
Query:  MSSAAAMAARSALRSTLARATVSGRLTNGAKVKSPRSPFGIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG
        MSSAAAMAARSA RSTLARAT+S RLTNGAKVKSP SPF IPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWT EG
Subjt:  MSSAAAMAARSALRSTLARATVSGRLTNGAKVKSPRSPFGIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG

TrEMBL top hitse value%identityAlignment
A0A0A0KHP8 Uncharacterized protein3.8e-4273.79Show/hide
Query:  MSSAAAMAARSALRSTLARATVSGRLTNGAKVKSPRSPFGIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG--QV
        MSSAAAMAARSA RSTLARA +SGR T+ AK KS  SPF IPKQNPLSQSHRILRSPVE+SCC+ESLLPYHSATASALLTSMLSVSRRSYGWTPE   ++
Subjt:  MSSAAAMAARSALRSTLARATVSGRLTNGAKVKSPRSPFGIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG--QV

Query:  NYEI---SFSLLIDGIN--FSNMSRVILISSTTQIAMMMYDECRM
        N +       L+I+  N   SN + +ILISSTTQIAMMMYDE RM
Subjt:  NYEI---SFSLLIDGIN--FSNMSRVILISSTTQIAMMMYDECRM

A0A6J1CL53 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X13.1e-3992.78Show/hide
Query:  MSSAAAMAARSALRSTLARATVSGRLTNGAKVKSPRSPFGIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEGQ
        MS+AAAMAARSALRST+ARA +SGRLT GAKVKS RSPFG+PKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEGQ
Subjt:  MSSAAAMAARSALRSTLARATVSGRLTNGAKVKSPRSPFGIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEGQ

A0A6J1CMX8 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X41.2e-3892.71Show/hide
Query:  MSSAAAMAARSALRSTLARATVSGRLTNGAKVKSPRSPFGIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG
        MS+AAAMAARSALRST+ARA +SGRLT GAKVKS RSPFG+PKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG
Subjt:  MSSAAAMAARSALRSTLARATVSGRLTNGAKVKSPRSPFGIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG

A0A6J1EE17 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X28.9e-3993.81Show/hide
Query:  MSSAAAMAARSALRSTLARATVSGRLTNGAKVKSPRSPFGIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEGQ
        MSSAAAMAARSA RSTLARAT+S RLTNGAKVKSP SPF IPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWT EGQ
Subjt:  MSSAAAMAARSALRSTLARATVSGRLTNGAKVKSPRSPFGIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEGQ

A0A6J1IR78 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X38.9e-3993.81Show/hide
Query:  MSSAAAMAARSALRSTLARATVSGRLTNGAKVKSPRSPFGIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEGQ
        MSSAAAMAARSA RSTLARAT+S RLTNGAKVKSP SPF IPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWT EGQ
Subjt:  MSSAAAMAARSALRSTLARATVSGRLTNGAKVKSPRSPFGIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEGQ

SwissProt top hitse value%identityAlignment
Q93ZJ3 Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial4.9e-1049.46Show/hide
Query:  SSAAAMAARSALRSTLAR--ATVSGRLTNGAKVKSPRSPFGIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGW
        +SA    ARS LR+  +R  A  +GR  + AK  +P       +++PL      LR+PVE+S CVESLLPYHSATASAL+TS LS+S ++YGW
Subjt:  SSAAAMAARSALRSTLAR--ATVSGRLTNGAKVKSPRSPFGIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGW

Arabidopsis top hitse value%identityAlignment
AT1G28395.1 unknown protein7.2e-1757.61Show/hide
Query:  AARSALRSTLARATVSG-RLTNGAK--VKSPRSPFGIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG
        AARS  RS  +RA+ +  R + G K    S R+ F +PKQ+PL  ++RI RSPVE+SCCVE++LPYH+ATASALL SMLSVSRR  GW  +G
Subjt:  AARSALRSTLARATVSG-RLTNGAK--VKSPRSPFGIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG

AT1G28395.2 unknown protein7.2e-1757.61Show/hide
Query:  AARSALRSTLARATVSG-RLTNGAK--VKSPRSPFGIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG
        AARS  RS  +RA+ +  R + G K    S R+ F +PKQ+PL  ++RI RSPVE+SCCVE++LPYH+ATASALL SMLSVSRR  GW  +G
Subjt:  AARSALRSTLARATVSG-RLTNGAK--VKSPRSPFGIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG

AT1G28395.3 unknown protein7.2e-1757.61Show/hide
Query:  AARSALRSTLARATVSG-RLTNGAK--VKSPRSPFGIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG
        AARS  RS  +RA+ +  R + G K    S R+ F +PKQ+PL  ++RI RSPVE+SCCVE++LPYH+ATASALL SMLSVSRR  GW  +G
Subjt:  AARSALRSTLARATVSG-RLTNGAK--VKSPRSPFGIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG

AT2G33847.1 unknown protein2.9e-1861.63Show/hide
Query:  AARSALRSTLARATVSGRLTNGAKVKSPRSPFGIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWT
        AARS  RS + RA V+   +      S RS F +PKQ+PL  SHRI RSPVE+SCCVE++LPYH+ATASALL SMLSVS RS  WT
Subjt:  AARSALRSTLARATVSGRLTNGAKVKSPRSPFGIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWT

AT2G33847.2 unknown protein7.7e-1960.67Show/hide
Query:  AARSALRSTLARATVSGRLTNGAKVKSPRSPFGIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG
        AARS  RS + RA V+   +      S RS F +PKQ+PL  SHRI RSPVE+SCCVE++LPYH+ATASALL SMLSVS RS  WT +G
Subjt:  AARSALRSTLARATVSGRLTNGAKVKSPRSPFGIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTCCGCCGCTGCCATGGCTGCTAGGTCAGCCCTCAGATCAACCCTAGCCCGAGCCACTGTCTCCGGCAGACTTACCAACGGTGCCAAAGTGAAATCCCCCCGTTC
TCCGTTCGGCATCCCCAAGCAGAACCCACTCTCCCAATCCCATCGCATTTTGAGGTCTCCTGTTGAAATGAGTTGCTGTGTGGAATCGTTGCTTCCTTACCACTCTGCTA
CTGCCTCTGCATTGCTTACGTCTATGCTTTCTGTTTCTCGTCGGAGCTACGGTTGGACTCCGGAAGGTCAAGTTAACTATGAAATTTCTTTTTCTTTGCTCATTGATGGC
ATTAATTTTAGTAACATGTCAAGAGTGATATTGATTTCTTCTACCACTCAGATTGCAATGATGATGTATGATGAATGTCGGATGGACTTACCTAAGATGGATGATTACTG
TCTGTTGAGATGCGGTGCATCGATCATAATTTCGAGAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCTCCGCCGCTGCCATGGCTGCTAGGTCAGCCCTCAGATCAACCCTAGCCCGAGCCACTGTCTCCGGCAGACTTACCAACGGTGCCAAAGTGAAATCCCCCCGTTC
TCCGTTCGGCATCCCCAAGCAGAACCCACTCTCCCAATCCCATCGCATTTTGAGGTCTCCTGTTGAAATGAGTTGCTGTGTGGAATCGTTGCTTCCTTACCACTCTGCTA
CTGCCTCTGCATTGCTTACGTCTATGCTTTCTGTTTCTCGTCGGAGCTACGGTTGGACTCCGGAAGGTCAAGTTAACTATGAAATTTCTTTTTCTTTGCTCATTGATGGC
ATTAATTTTAGTAACATGTCAAGAGTGATATTGATTTCTTCTACCACTCAGATTGCAATGATGATGTATGATGAATGTCGGATGGACTTACCTAAGATGGATGATTACTG
TCTGTTGAGATGCGGTGCATCGATCATAATTTCGAGAATTTGA
Protein sequenceShow/hide protein sequence
MSSAAAMAARSALRSTLARATVSGRLTNGAKVKSPRSPFGIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEGQVNYEISFSLLIDG
INFSNMSRVILISSTTQIAMMMYDECRMDLPKMDDYCLLRCGASIIISRI