CuGenDBv2

Gene ID	Spg011710
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Nuclear transport factor 2 (NTF2) family protein
Genome location	scaffold1:4276191..4277632
RNA-Seq Expression	Spg011710
Synteny	Spg011710
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_023003403.1 uncharacterized protein LOC111497026 isoform X1 [Cucurbita maxima]

1.6e-76

64.94

Show/hide

Query:  SILLLCHFTFPMAFSSSTKFLHFPASTSIS-PNSNSNNYN-FTPLYTTSRYSLPSTAERRGYLCVKCNGGPEMPQQRKDDDDNDNDETLKRVRKLYEVVK
        S L+ CHFTFPMAFSSST  +HFP S S S  +SNSNNYN    LYT  R   P  A+ + YLCVKCNG  +     KDD+DNDND+TLKRV KLYEV+K
Subjt:  SILLLCHFTFPMAFSSSTKFLHFPASTSIS-PNSNSNNYN-FTPLYTTSRYSLPSTAERRGYLCVKCNGGPEMPQQRKDDDDNDNDETLKRVRKLYEVVK

Query:  DKNLTKLSDVVADECPDVYNSIPLLRIFRAKLKVMEFFSHLTKTFGNNLKFTAKPMTKHGSMVGIKWKLGWDKTLMTLGR-VNIHSYHSYVGKLLIGNLE
        +KN+ ++ +V+ADE PD YNSIP +R+FRA L V+EFFSH++KTF N+LKFTAKP TK+GSM G+KWKLGW +TLMTLG+ ++I S+H YVGKLLIGN+E
Subjt:  DKNLTKLSDVVADECPDVYNSIPLLRIFRAKLKVMEFFSHLTKTFGNNLKFTAKPMTKHGSMVGIKWKLGWDKTLMTLGR-VNIHSYHSYVGKLLIGNLE

Query:  SIMDPFVQPKPM--RLMDLNLE-PKQRRLASLYLGFFLFVLSLFFFQFSVR
         IMD  VQ KP+     DLNLE PK+RR A LYLGFF FVLSLFFFQFSVR
Subjt:  SIMDPFVQPKPM--RLMDLNLE-PKQRRLASLYLGFFLFVLSLFFFQFSVR

XP_023003404.1 uncharacterized protein LOC111497026 isoform X2 [Cucurbita maxima]

6.5e-78

65.46

Show/hide

Query:  SILLLCHFTFPMAFSSSTKFLHFPASTSIS-PNSNSNNYN-FTPLYTTSRYSLPSTAERRGYLCVKCNGGPEMPQQRKDDDDNDNDETLKRVRKLYEVVK
        S L+ CHFTFPMAFSSST  +HFP S S S  +SNSNNYN    LYT  R   P  A+ + YLCVKCNG  +     KDD+DNDND+TLKRV KLYEV+K
Subjt:  SILLLCHFTFPMAFSSSTKFLHFPASTSIS-PNSNSNNYN-FTPLYTTSRYSLPSTAERRGYLCVKCNGGPEMPQQRKDDDDNDNDETLKRVRKLYEVVK

Query:  DKNLTKLSDVVADECPDVYNSIPLLRIFRAKLKVMEFFSHLTKTFGNNLKFTAKPMTKHGSMVGIKWKLGWDKTLMTLGR-VNIHSYHSYVGKLLIGNLE
        +KN+ ++ +V+ADE PD YNSIP +R+FRA L V+EFFSH++KTF N+LKFTAKP TK+GSM G+KWKLGW +TLMTLG+ ++I S+H YVGKLLIGN+E
Subjt:  DKNLTKLSDVVADECPDVYNSIPLLRIFRAKLKVMEFFSHLTKTFGNNLKFTAKPMTKHGSMVGIKWKLGWDKTLMTLGR-VNIHSYHSYVGKLLIGNLE

Query:  SIMDPFVQPKPMRLMDLNLE-PKQRRLASLYLGFFLFVLSLFFFQFSVR
         IMD  VQ KP+   DLNLE PK+RR A LYLGFF FVLSLFFFQFSVR
Subjt:  SIMDPFVQPKPMRLMDLNLE-PKQRRLASLYLGFFLFVLSLFFFQFSVR

XP_023003405.1 uncharacterized protein LOC111497026 isoform X3 [Cucurbita maxima]

4.1e-64

63.21

Show/hide

Query:  SILLLCHFTFPMAFSSSTKFLHFPASTSIS-PNSNSNNYN-FTPLYTTSRYSLPSTAERRGYLCVKCNGGPEMPQQRKDDDDNDNDETLKRVRKLYEVVK
        S L+ CHFTFPMAFSSST  +HFP S S S  +SNSNNYN    LYT  R   P  A+ + YLCVKCNG  +     KDD+DNDND+TLKRV KLYEV+K
Subjt:  SILLLCHFTFPMAFSSSTKFLHFPASTSIS-PNSNSNNYN-FTPLYTTSRYSLPSTAERRGYLCVKCNGGPEMPQQRKDDDDNDNDETLKRVRKLYEVVK

Query:  DKNLTKLSDVVADECPDVYNSIPLLRIFRAKLKVMEFFSHLTKTFGNNLKFTAKPMTKHGSMVGIKWKLGWDKTLMTLGR-VNIHSYHSYVGKLLIGNLE
        +KN+ ++ +V+ADE PD YNSIP +R+FRA L V+EFFSH++KTF N+LKFTAKP TK+GSM G+KWKLGW +TLMTLG+ ++I S+H YVGKLLIGN+E
Subjt:  DKNLTKLSDVVADECPDVYNSIPLLRIFRAKLKVMEFFSHLTKTFGNNLKFTAKPMTKHGSMVGIKWKLGWDKTLMTLGR-VNIHSYHSYVGKLLIGNLE

Query:  SIMDPFVQPKPM
         IMD  VQ KP+
Subjt:  SIMDPFVQPKPM

XP_023518450.1 uncharacterized protein LOC111781941 isoform X1 [Cucurbita pepo subsp. pepo]

4.3e-74

64.14

Show/hide

Query:  SILLLCHFTFPMAFSSSTKFLHFPASTSIS-PNSNSNNYN-FTPLYTTSRYSLPSTAERRGYLCVKCNGGPEMPQQRKDDDDNDNDETLKRVRKLYEVVK
        S L+ CHFTFPMAFSSST  +H P S S S  +SNSNNYN    LYT  R   P  A+ + YLCVKCNG  +     K  DDNDND+TLKRV KLYEV+K
Subjt:  SILLLCHFTFPMAFSSSTKFLHFPASTSIS-PNSNSNNYN-FTPLYTTSRYSLPSTAERRGYLCVKCNGGPEMPQQRKDDDDNDNDETLKRVRKLYEVVK

Query:  DKNLTKLSDVVADECPDVYNSIPLLRIFRAKLKVMEFFSHLTKTFGNNLKFTAKPMTKHGSMVGIKWKLGWDKTLMTLGR-VNIHSYHSYVGKLLIGNLE
        +KN+ ++ +V+ADE PD YNSIP +R+FRA L V+EFFSH++KTF N+LKFTAKP TK+GSM G+KWKLGW +TLMTLG+ ++I S+H YVGKLLIGN+E
Subjt:  DKNLTKLSDVVADECPDVYNSIPLLRIFRAKLKVMEFFSHLTKTFGNNLKFTAKPMTKHGSMVGIKWKLGWDKTLMTLGR-VNIHSYHSYVGKLLIGNLE

Query:  SIMDPFVQPKPM--RLMDLNLE-PKQRRLASLYLGFFLFVLSLFFFQFSVR
         IMD  VQ KP+     DLNLE PK+RR A LYLGFF FVLSLFFFQFSVR
Subjt:  SIMDPFVQPKPM--RLMDLNLE-PKQRRLASLYLGFFLFVLSLFFFQFSVR

XP_023518451.1 uncharacterized protein LOC111781941 isoform X2 [Cucurbita pepo subsp. pepo]

1.8e-75

64.66

Show/hide

Query:  SILLLCHFTFPMAFSSSTKFLHFPASTSIS-PNSNSNNYN-FTPLYTTSRYSLPSTAERRGYLCVKCNGGPEMPQQRKDDDDNDNDETLKRVRKLYEVVK
        S L+ CHFTFPMAFSSST  +H P S S S  +SNSNNYN    LYT  R   P  A+ + YLCVKCNG  +     K  DDNDND+TLKRV KLYEV+K
Subjt:  SILLLCHFTFPMAFSSSTKFLHFPASTSIS-PNSNSNNYN-FTPLYTTSRYSLPSTAERRGYLCVKCNGGPEMPQQRKDDDDNDNDETLKRVRKLYEVVK

Query:  DKNLTKLSDVVADECPDVYNSIPLLRIFRAKLKVMEFFSHLTKTFGNNLKFTAKPMTKHGSMVGIKWKLGWDKTLMTLGR-VNIHSYHSYVGKLLIGNLE
        +KN+ ++ +V+ADE PD YNSIP +R+FRA L V+EFFSH++KTF N+LKFTAKP TK+GSM G+KWKLGW +TLMTLG+ ++I S+H YVGKLLIGN+E
Subjt:  DKNLTKLSDVVADECPDVYNSIPLLRIFRAKLKVMEFFSHLTKTFGNNLKFTAKPMTKHGSMVGIKWKLGWDKTLMTLGR-VNIHSYHSYVGKLLIGNLE

Query:  SIMDPFVQPKPMRLMDLNLE-PKQRRLASLYLGFFLFVLSLFFFQFSVR
         IMD  VQ KP+   DLNLE PK+RR A LYLGFF FVLSLFFFQFSVR
Subjt:  SIMDPFVQPKPMRLMDLNLE-PKQRRLASLYLGFFLFVLSLFFFQFSVR

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B083 uncharacterized protein LOC103484658

4.4e-40

42.04

Show/hide

Query:  AFSSSTKFLHFPASTSISPNSNSNNYNFTPLYTTS--------RYSLPSTAERRGYLCVKCNGGPEMPQQRKDDDDNDNDETLKRVRKLYEVVKDKNLTK
        A SS   F+HFP S SIS  SNS N N    + T+           L +   RR  LCV+C+GG     + +DD+D+++++ L+ + K+Y+ +K K++ +
Subjt:  AFSSSTKFLHFPASTSISPNSNSNNYNFTPLYTTS--------RYSLPSTAERRGYLCVKCNGGPEMPQQRKDDDDNDNDETLKRVRKLYEVVKDKNLTK

Query:  LSDVVADECPDVYNSIPLLRIFRAKLKVMEFFSHLTKTFGNNLKFTAKPMTKHGSMVGIKWKLGWDKTLMTLGR-VNIHSYHSYVGKLLIGNLESIMDPF
        L++V+AD+ PD+ +SIP L      LK+ +  S++ K    +L F   P  K GSMVGIKWK+GW+K L+   + + IHS+HSYVGKLLIGN E++++P 
Subjt:  LSDVVADECPDVYNSIPLLRIFRAKLKVMEFFSHLTKTFGNNLKFTAKPMTKHGSMVGIKWKLGWDKTLMTLGR-VNIHSYHSYVGKLLIGNLESIMDPF

Query:  VQPKPMRLM---DLNLEPKQRRLASLYLGFFLFVLSLFFFQFSVR
        +Q  PM++M   D   + K RR+ASL LG FL ++SLF  QFS+R
Subjt:  VQPKPMRLM---DLNLEPKQRRLASLYLGFFLFVLSLFFFQFSVR

A0A6J1EFG0 uncharacterized protein LOC111433706

4.1e-46

66.89

Show/hide

Query:  LTKLSDVVADECPDVYNSIPLLRIFRAKLKVMEFFSHLTKTFGNNLKFTAKPMTKHGSMVGIKWKLGWDKTLMTLGR-VNIHSYHSYVGKLLIGNLESIM
        + ++ +V+ADE PD YNSIP +R+FRA L ++EFFSH++KTF N+LKFTAKP TK+GSM G+KWKLGW +TLMTLG+ ++I S+H YVGKLLIGN+E IM
Subjt:  LTKLSDVVADECPDVYNSIPLLRIFRAKLKVMEFFSHLTKTFGNNLKFTAKPMTKHGSMVGIKWKLGWDKTLMTLGR-VNIHSYHSYVGKLLIGNLESIM

Query:  DPFVQPKPM--RLMDLNLEP-KQRRLASLYLGFFLFVLSLFFFQFSVR
        D  VQ KP+     DLNLEP K+RR A LYLGFF FVLSLFFFQFSVR
Subjt:  DPFVQPKPM--RLMDLNLEP-KQRRLASLYLGFFLFVLSLFFFQFSVR

A0A6J1KRN9 uncharacterized protein LOC111497026 isoform X3

2.0e-64

63.21

Show/hide

Query:  SILLLCHFTFPMAFSSSTKFLHFPASTSIS-PNSNSNNYN-FTPLYTTSRYSLPSTAERRGYLCVKCNGGPEMPQQRKDDDDNDNDETLKRVRKLYEVVK
        S L+ CHFTFPMAFSSST  +HFP S S S  +SNSNNYN    LYT  R   P  A+ + YLCVKCNG  +     KDD+DNDND+TLKRV KLYEV+K
Subjt:  SILLLCHFTFPMAFSSSTKFLHFPASTSIS-PNSNSNNYN-FTPLYTTSRYSLPSTAERRGYLCVKCNGGPEMPQQRKDDDDNDNDETLKRVRKLYEVVK

Query:  DKNLTKLSDVVADECPDVYNSIPLLRIFRAKLKVMEFFSHLTKTFGNNLKFTAKPMTKHGSMVGIKWKLGWDKTLMTLGR-VNIHSYHSYVGKLLIGNLE
        +KN+ ++ +V+ADE PD YNSIP +R+FRA L V+EFFSH++KTF N+LKFTAKP TK+GSM G+KWKLGW +TLMTLG+ ++I S+H YVGKLLIGN+E
Subjt:  DKNLTKLSDVVADECPDVYNSIPLLRIFRAKLKVMEFFSHLTKTFGNNLKFTAKPMTKHGSMVGIKWKLGWDKTLMTLGR-VNIHSYHSYVGKLLIGNLE

Query:  SIMDPFVQPKPM
         IMD  VQ KP+
Subjt:  SIMDPFVQPKPM

A0A6J1KT91 uncharacterized protein LOC111497026 isoform X2

3.1e-78

65.46

Show/hide

Query:  SILLLCHFTFPMAFSSSTKFLHFPASTSIS-PNSNSNNYN-FTPLYTTSRYSLPSTAERRGYLCVKCNGGPEMPQQRKDDDDNDNDETLKRVRKLYEVVK
        S L+ CHFTFPMAFSSST  +HFP S S S  +SNSNNYN    LYT  R   P  A+ + YLCVKCNG  +     KDD+DNDND+TLKRV KLYEV+K
Subjt:  SILLLCHFTFPMAFSSSTKFLHFPASTSIS-PNSNSNNYN-FTPLYTTSRYSLPSTAERRGYLCVKCNGGPEMPQQRKDDDDNDNDETLKRVRKLYEVVK

Query:  DKNLTKLSDVVADECPDVYNSIPLLRIFRAKLKVMEFFSHLTKTFGNNLKFTAKPMTKHGSMVGIKWKLGWDKTLMTLGR-VNIHSYHSYVGKLLIGNLE
        +KN+ ++ +V+ADE PD YNSIP +R+FRA L V+EFFSH++KTF N+LKFTAKP TK+GSM G+KWKLGW +TLMTLG+ ++I S+H YVGKLLIGN+E
Subjt:  DKNLTKLSDVVADECPDVYNSIPLLRIFRAKLKVMEFFSHLTKTFGNNLKFTAKPMTKHGSMVGIKWKLGWDKTLMTLGR-VNIHSYHSYVGKLLIGNLE

Query:  SIMDPFVQPKPMRLMDLNLE-PKQRRLASLYLGFFLFVLSLFFFQFSVR
         IMD  VQ KP+   DLNLE PK+RR A LYLGFF FVLSLFFFQFSVR
Subjt:  SIMDPFVQPKPMRLMDLNLE-PKQRRLASLYLGFFLFVLSLFFFQFSVR

A0A6J1KWE5 uncharacterized protein LOC111497026 isoform X1

7.7e-77

64.94

Show/hide

Query:  SILLLCHFTFPMAFSSSTKFLHFPASTSIS-PNSNSNNYN-FTPLYTTSRYSLPSTAERRGYLCVKCNGGPEMPQQRKDDDDNDNDETLKRVRKLYEVVK
        S L+ CHFTFPMAFSSST  +HFP S S S  +SNSNNYN    LYT  R   P  A+ + YLCVKCNG  +     KDD+DNDND+TLKRV KLYEV+K
Subjt:  SILLLCHFTFPMAFSSSTKFLHFPASTSIS-PNSNSNNYN-FTPLYTTSRYSLPSTAERRGYLCVKCNGGPEMPQQRKDDDDNDNDETLKRVRKLYEVVK

Query:  DKNLTKLSDVVADECPDVYNSIPLLRIFRAKLKVMEFFSHLTKTFGNNLKFTAKPMTKHGSMVGIKWKLGWDKTLMTLGR-VNIHSYHSYVGKLLIGNLE
        +KN+ ++ +V+ADE PD YNSIP +R+FRA L V+EFFSH++KTF N+LKFTAKP TK+GSM G+KWKLGW +TLMTLG+ ++I S+H YVGKLLIGN+E
Subjt:  DKNLTKLSDVVADECPDVYNSIPLLRIFRAKLKVMEFFSHLTKTFGNNLKFTAKPMTKHGSMVGIKWKLGWDKTLMTLGR-VNIHSYHSYVGKLLIGNLE

Query:  SIMDPFVQPKPM--RLMDLNLE-PKQRRLASLYLGFFLFVLSLFFFQFSVR
         IMD  VQ KP+     DLNLE PK+RR A LYLGFF FVLSLFFFQFSVR
Subjt:  SIMDPFVQPKPM--RLMDLNLE-PKQRRLASLYLGFFLFVLSLFFFQFSVR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G22370.1 unknown protein

1.8e-09

Show/hide

Query:  MEFFSHLTKTFGNNLKFTAKPMTKHGSMVGIKWKLGWDKTLMTLGR-VNIHSYHSYVGKLLIGNLESIMDPFVQPKPMRL
        M FF  L    G ++K   KP  K G  VG++W+L  DK+ + LG+  + H  H Y GKLLI N+E  M+P    + +RL
Subjt:  MEFFSHLTKTFGNNLKFTAKPMTKHGSMVGIKWKLGWDKTLMTLGR-VNIHSYHSYVGKLLIGNLESIMDPFVQPKPMRL

AT5G41470.1 Nuclear transport factor 2 (NTF2) family protein

2.2e-07

26.05

Show/hide

Query:  VRKLYEVVKDKNLTKLSDVVADECPDVYNSIPLLRIFRAKLKVMEFFSHLTKTFGNNLKFTAKPMTK-HGSMVGIKWKLGWDKTLMTLGR-VNIHSYHSY
        V K Y  + +KN  +LS  ++ +C    +     + FR K + MEFF  L K+ G N+KF  + + +  G    + W L W    +   R  + + +   
Subjt:  VRKLYEVVKDKNLTKLSDVVADECPDVYNSIPLLRIFRAKLKVMEFFSHLTKTFGNNLKFTAKPMTK-HGSMVGIKWKLGWDKTLMTLGR-VNIHSYHSY

Query:  VGKLLIGNLESIMDPFVQP
         G+L+I N   +++  ++P
Subjt:  VGKLLIGNLESIMDPFVQP

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCAAACTTTATGTCTATTCCAGAAGCCATATCAATCCTCTTGCTCTGCCATTTCACCTTTCCAATGGCCTTTTCTTCCTCAACAAAGTTCCTCCATTTCCCTGCCTC
AACCTCAATCTCCCCAAACTCTAACTCTAACAACTACAACTTCACCCCTCTTTACACCACAAGTCGTTACTCGCTGCCATCGACAGCCGAGCGTCGAGGCTATTTGTGCG
TAAAATGCAATGGTGGCCCTGAGATGCCACAACAGAGAAAAGACGACGACGACAACGATAACGATGAGACTCTCAAAAGAGTCCGCAAACTTTACGAGGTGGTAAAGGAC
AAAAACCTCACCAAATTGTCTGATGTAGTAGCAGATGAATGTCCGGATGTCTATAATTCCATCCCTTTGTTACGAATCTTCCGAGCCAAATTGAAAGTGATGGAATTCTT
CTCTCATCTCACCAAAACCTTCGGGAACAACCTAAAATTCACAGCGAAGCCAATGACAAAACATGGATCTATGGTGGGTATTAAATGGAAATTAGGGTGGGACAAAACCC
TGATGACGTTGGGAAGAGTGAATATCCATTCTTACCATAGCTACGTAGGAAAGTTGCTTATTGGAAACTTGGAGAGTATAATGGATCCTTTTGTTCAGCCCAAGCCCATG
AGACTGATGGATTTGAATTTGGAGCCAAAACAGAGGAGATTAGCATCGTTGTATCTGGGTTTCTTCCTCTTTGTTCTCTCGCTCTTCTTTTTCCAGTTTTCTGTTCGTTG
A

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MANFMSIPEAISILLLCHFTFPMAFSSSTKFLHFPASTSISPNSNSNNYNFTPLYTTSRYSLPSTAERRGYLCVKCNGGPEMPQQRKDDDDNDNDETLKRVRKLYEVVKD
KNLTKLSDVVADECPDVYNSIPLLRIFRAKLKVMEFFSHLTKTFGNNLKFTAKPMTKHGSMVGIKWKLGWDKTLMTLGRVNIHSYHSYVGKLLIGNLESIMDPFVQPKPM
RLMDLNLEPKQRRLASLYLGFFLFVLSLFFFQFSVR

Spg011710 (gene) of Sponge gourd (cylindrica) v1 genome