CuGenDBv2

Gene ID	Spg011781
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	VID27-like protein
Genome location	scaffold1:3443671..3444396
RNA-Seq Expression	Spg011781
Synteny	Spg011781
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6594629.1 hypothetical protein SDJN03_11182, partial [Cucurbita argyrosperma subsp. sororia]

5.1e-93

79.35

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Query:  SPTISIS--SHPLFSTLLTFSAVILLYFPRLLWRILLSPVFLLTGFLLLSLLRLGATQRSFLRQ-SQTVSEIECRQSSENDAVVRSEEDCGRNDAVSEGS
        +PT+SIS  S PLFSTLL+F A+ LLYFPRLLWRIL SP+FLLTGFLLLSLLRLGATQRSFLRQ +   ++IEC +S+ENDA V+SE     ++AVS GS
Subjt:  SPTISIS--SHPLFSTLLTFSAVILLYFPRLLWRILLSPVFLLTGFLLLSLLRLGATQRSFLRQ-SQTVSEIECRQSSENDAVVRSEEDCGRNDAVSEGS

Query:  EGA--VSCACFEESFVQWNVRAPLEVIYEEYEGEDHDKDASNESDPEPRQVRIGLERYPSLSLYYPETDSDSSSEDNEFPATGAWDSLDDKVCFMWDEDE
        + A  VSCACFEESFVQWNVRAPLEVIYEEYEGEDHDK+ASNESDPEPRQVRIGLERYPSLSLYYPETDSDSSSEDN FP TG WDSLDD +C MWDEDE
Subjt:  EGA--VSCACFEESFVQWNVRAPLEVIYEEYEGEDHDKDASNESDPEPRQVRIGLERYPSLSLYYPETDSDSSSEDNEFPATGAWDSLDDKVCFMWDEDE

Query:  DRDELIEIALDKTSKKASEFQLEEDNL--IEIDISPTRINHEFPDVK
        DRDELIEIALDKT+KKASEF LEEDNL  IEIDISPTR + EFP  K
Subjt:  DRDELIEIALDKTSKKASEFQLEEDNL--IEIDISPTRINHEFPDVK

KAG7026597.1 hypothetical protein SDJN02_10599, partial [Cucurbita argyrosperma subsp. argyrosperma]

8.7e-93

79.92

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Query:  SPTISIS--SHPLFSTLLTFSAVILLYFPRLLWRILLSPVFLLTGFLLLSLLRLGATQRSFLRQ-SQTVSEIECRQSSENDAVVRSEEDCGRNDAVSEGS
        +PT+SIS  S PLFSTLL+F A+ LLYFPRLLWRIL SP+FLLTGFLLLSLLRLGATQRSFLRQ +   ++IEC +S+ENDA V+SE     ++AVS GS
Subjt:  SPTISIS--SHPLFSTLLTFSAVILLYFPRLLWRILLSPVFLLTGFLLLSLLRLGATQRSFLRQ-SQTVSEIECRQSSENDAVVRSEEDCGRNDAVSEGS

Query:  EGA--VSCACFEESFVQWNVRAPLEVIYEEYEGEDHDKDASNESDPEPRQVRIGLERYPSLSLYYPETDSDSSSEDNEFPATGAWDSLDDKVCFMWDEDE
        + A  VSCACFEESFVQWNVRAPLEVIYEEYEGEDHDK+ASNESDPEPRQVRIGLERYPSLSLYYPETDSDSSSEDN FP TG WDSLDD +C MWDEDE
Subjt:  EGA--VSCACFEESFVQWNVRAPLEVIYEEYEGEDHDKDASNESDPEPRQVRIGLERYPSLSLYYPETDSDSSSEDNEFPATGAWDSLDDKVCFMWDEDE

Query:  DRDELIEIALDKTSKKASEFQLEEDNL--IEIDISPTRINHEFP
        DRDELIEIALDKT+KKASEF LEEDNL  IEIDISPTR + EFP
Subjt:  DRDELIEIALDKTSKKASEFQLEEDNL--IEIDISPTRINHEFP

XP_022926379.1 uncharacterized protein LOC111433544 [Cucurbita moschata]

1.6e-91

79.51

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Query:  SPTISIS--SHPLFSTLLTFSAVILLYFPRLLWRILLSPVFLLTGFLLLSLLRLGATQRSFLRQ-SQTVSEIECRQSSENDAVVRSEEDCGRNDAVSEGS
        +PT+SIS  S PLFSTLL+F A+ LLYFPRLLWRIL SP+FLLTGFLLLSLLRLGATQRSFLRQ S   ++IEC +S+E+ A V+SE     ++AVS GS
Subjt:  SPTISIS--SHPLFSTLLTFSAVILLYFPRLLWRILLSPVFLLTGFLLLSLLRLGATQRSFLRQ-SQTVSEIECRQSSENDAVVRSEEDCGRNDAVSEGS

Query:  EGA--VSCACFEESFVQWNVRAPLEVIYEEYEGEDHDKDASNESDPEPRQVRIGLERYPSLSLYYPETDSDSSSEDNEFPATGAWDSLDDKVCFMWDEDE
        + A  VSCACFEESFVQWNVRAPLEVIYEEYEGEDHDK+ASNESDPEPRQVRIGLERYPSLSLYYPETDSDSSSEDN FP TG WDSLDD +C MWDEDE
Subjt:  EGA--VSCACFEESFVQWNVRAPLEVIYEEYEGEDHDKDASNESDPEPRQVRIGLERYPSLSLYYPETDSDSSSEDNEFPATGAWDSLDDKVCFMWDEDE

Query:  DRDELIEIALDKTSKKASEFQLEEDNL--IEIDISPTRINHEFP
        DRDELIEIALDKT+KKASEF LEEDNL  IEIDISPTR + EFP
Subjt:  DRDELIEIALDKTSKKASEFQLEEDNL--IEIDISPTRINHEFP

XP_023003982.1 uncharacterized protein LOC111497433 [Cucurbita maxima]

1.1e-90

77.73

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Query:  SPTISIS--SHPLFSTLLTFSAVILLYFPRLLWRILLSPVFLLTGFLLLSLLRLGATQRSFLRQ-SQTVSEIECRQSSENDAVVRSEEDCGRNDAVSEGS
        +PT+SIS  S PL STLL+F A+ LLYFPRLLWRIL SP+FLLTGFLLLSLLRLGATQRSFLRQ +   ++IEC +S+ENDA V+SE     +++VS GS
Subjt:  SPTISIS--SHPLFSTLLTFSAVILLYFPRLLWRILLSPVFLLTGFLLLSLLRLGATQRSFLRQ-SQTVSEIECRQSSENDAVVRSEEDCGRNDAVSEGS

Query:  EGA--VSCACFEESFVQWNVRAPLEVIYEEYEGEDHDKDASNESDPEPRQVRIGLERYPSLSLYYPETDSDSSSEDNEFPATGAWDSLDDKVCFMWDEDE
        + A  VSC CFEESFVQWNVRAPLEVIYEEYEGEDHDK+ASNESDPEPRQVRIGLERYPSLSLYYPETDSDSSSEDN FP TG WDSLDD +C MWDEDE
Subjt:  EGA--VSCACFEESFVQWNVRAPLEVIYEEYEGEDHDKDASNESDPEPRQVRIGLERYPSLSLYYPETDSDSSSEDNEFPATGAWDSLDDKVCFMWDEDE

Query:  DRDELIEIALDKTSKKASEFQLEEDNL--IEIDISPTRINHEFPDVK
        DRDELIEIALDKT+KKASEF LEEDNL  IEIDISP R + EFP  K
Subjt:  DRDELIEIALDKTSKKASEFQLEEDNL--IEIDISPTRINHEFPDVK

XP_023518306.1 uncharacterized protein LOC111781826 [Cucurbita pepo subsp. pepo]

1.1e-90

78.14

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Query:  SPTISIS--SHPLFSTLLTFSAVILLYFPRLLWRILLSPVFLLTGFLLLSLLRLGATQRSFLRQSQTVS-EIECRQSSENDAVVRSEEDCGRNDAVSEGS
        +PT+SIS  S PLFSTLL+F A+ LLYFPRLLWRIL SP+FLLTGFLLLSLLRLGATQRSFLRQ+   + +IE  +S+E DA V+SE     +++VS GS
Subjt:  SPTISIS--SHPLFSTLLTFSAVILLYFPRLLWRILLSPVFLLTGFLLLSLLRLGATQRSFLRQSQTVS-EIECRQSSENDAVVRSEEDCGRNDAVSEGS

Query:  EGA--VSCACFEESFVQWNVRAPLEVIYEEYEGEDHDKDASNESDPEPRQVRIGLERYPSLSLYYPETDSDSSSEDNEFPATGAWDSLDDKVCFMWDEDE
        + A  VSCACFEESFVQWNVRAPLEVIYEEYEGEDHDK+ASNESDPEPRQVRIGLERYPSLSLYYPETDSDSSSEDN FP TG WDSLDD +C MWDEDE
Subjt:  EGA--VSCACFEESFVQWNVRAPLEVIYEEYEGEDHDKDASNESDPEPRQVRIGLERYPSLSLYYPETDSDSSSEDNEFPATGAWDSLDDKVCFMWDEDE

Query:  DRDELIEIALDKTSKKASEFQLEEDNL--IEIDISPTRINHEFPDVK
        DRDELIEIALDKT+KKASEF LEEDNL  IEIDISPTR + EFP  K
Subjt:  DRDELIEIALDKTSKKASEFQLEEDNL--IEIDISPTRINHEFPDVK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KLD5 Uncharacterized protein

3.6e-44

51.42

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Query:  SPTISISSHPLFSTLLTFSAVILLYFPRLLWRILLSPVFLLTGFLLLSLLRLGATQRSFLRQSQTVSEIECRQSSENDAVVRSEEDCGRNDAVSEGSEGA
        S ++SI SHPLFS LL+F  +ILL+FP  LW  LLSP  +L GFL LSLLRLGATQR   RQ Q ++      + +     +  E C     +S      
Subjt:  SPTISISSHPLFSTLLTFSAVILLYFPRLLWRILLSPVFLLTGFLLLSLLRLGATQRSFLRQSQTVSEIECRQSSENDAVVRSEEDCGRNDAVSEGSEGA

Query:  VSCACFEESFVQWNVRAPLEVIYEEYEGEDHDKDASNESDPEPRQVRI-----------------GLERYPSLSLYYPETDSDSSSEDNEFPATGAWDSL
           +CFEESFVQWNVRAPLEVIYE+YE ED +++   E + E  +V +                  +ERYPSLSLYYPETDSDS S        GA D +
Subjt:  VSCACFEESFVQWNVRAPLEVIYEEYEGEDHDKDASNESDPEPRQVRI-----------------GLERYPSLSLYYPETDSDSSSEDNEFPATGAWDSL

Query:  DDKVCFMWDEDEDRDELIEIALDKTSKKASEFQLEEDNLIEIDISPT
        ++ VCFMWD DEDRDELIEIALDK    +  FQLEE+NLIEIDISPT
Subjt:  DDKVCFMWDEDEDRDELIEIALDKTSKKASEFQLEEDNLIEIDISPT

A0A445BB74 Uncharacterized protein

6.8e-43

51.19

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Query:  SSHPLFSTLLTFSAVILLYFPRLLWRILLSPVFLLTGFLLLSLLRLGATQRS--FLRQSQTVSEIECRQS-SENDAVVRSEEDCGR---------NDAVS
        SS PLF  ++ F  +ILLY P   WRI+ SPV +LTG LLL +LRLG  QRS  F ++   V E+E ++S +E +     EE+ G+         ND + 
Subjt:  SSHPLFSTLLTFSAVILLYFPRLLWRILLSPVFLLTGFLLLSLLRLGATQRS--FLRQSQTVSEIECRQS-SENDAVVRSEEDCGR---------NDAVS

Query:  EGSE-------GAVSCACFEESFVQWNVRAPLEVIYEEYEGEDHDKDASNESDPEPRQVRIGLERYPSLSLYYPETDSDSSSEDNEFPATGAWDSLDDKV
          SE       G  S + FEESF++WNV+APLEVIYEEYEGE+       E  P  +Q    + RYPSLS YYPE+DSDSSSE N FPATG WDS  + +
Subjt:  EGSE-------GAVSCACFEESFVQWNVRAPLEVIYEEYEGEDHDKDASNESDPEPRQVRIGLERYPSLSLYYPETDSDSSSEDNEFPATGAWDSLDDKV

Query:  CFMWDEDEDRDELIEIALDKTSKKAS-EFQLEEDNLIEIDISPTRINHEFPD
         F WDE EDR+ LIEIALD + KK   EF  EE+NLIEIDISPTR   EF D
Subjt:  CFMWDEDEDRDELIEIALDKTSKKAS-EFQLEEDNLIEIDISPTRINHEFPD

A0A6J1CME6 uncharacterized protein LOC111012458

5.6e-69

69.2

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Query:  TISISSHPLFSTLLTFSAVILLYFPRLLWRILLSPVFLLTGFLLLSLLRLGATQRSFLRQSQTVSEIECRQSSENDAVV-RSEEDCGRNDAVSEGSEGA-
        TIS  S PLFSTLLTF A+ILL FPR+ W +L SPV LLTG LLLSLLRLGATQR F R  +  ++IE    S   AVV   EED GR+DAV     G  
Subjt:  TISISSHPLFSTLLTFSAVILLYFPRLLWRILLSPVFLLTGFLLLSLLRLGATQRSFLRQSQTVSEIECRQSSENDAVV-RSEEDCGRNDAVSEGSEGA-

Query:  -----VSCACFEESFVQWNVRAPLEVIYEEYEGEDHDKDASNESDP----EPRQVRIGLERYPSLSLYYPETDSDSSSEDNEFPATGAWDSLDDKVCFMW
             VSCACFEESFVQWNVRAPLEVIYEEYEGED DKD SNESDP    EPR V + +ERYPSLSLYYPETDSDSSS+D EFP  GAWDSL D +CFMW
Subjt:  -----VSCACFEESFVQWNVRAPLEVIYEEYEGEDHDKDASNESDP----EPRQVRIGLERYPSLSLYYPETDSDSSSEDNEFPATGAWDSLDDKVCFMW

Query:  DEDEDRDELIEIALDKTSKK---ASE-FQLEEDNLIEIDISPTRINHEFP
        D+ EDRDELIEIALDKT+ K   +SE FQLEE+NLIEIDISPTR + EFP
Subjt:  DEDEDRDELIEIALDKTSKK---ASE-FQLEEDNLIEIDISPTRINHEFP

A0A6J1EEY1 uncharacterized protein LOC111433544

8.0e-92

79.51

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Query:  SPTISIS--SHPLFSTLLTFSAVILLYFPRLLWRILLSPVFLLTGFLLLSLLRLGATQRSFLRQ-SQTVSEIECRQSSENDAVVRSEEDCGRNDAVSEGS
        +PT+SIS  S PLFSTLL+F A+ LLYFPRLLWRIL SP+FLLTGFLLLSLLRLGATQRSFLRQ S   ++IEC +S+E+ A V+SE     ++AVS GS
Subjt:  SPTISIS--SHPLFSTLLTFSAVILLYFPRLLWRILLSPVFLLTGFLLLSLLRLGATQRSFLRQ-SQTVSEIECRQSSENDAVVRSEEDCGRNDAVSEGS

Query:  EGA--VSCACFEESFVQWNVRAPLEVIYEEYEGEDHDKDASNESDPEPRQVRIGLERYPSLSLYYPETDSDSSSEDNEFPATGAWDSLDDKVCFMWDEDE
        + A  VSCACFEESFVQWNVRAPLEVIYEEYEGEDHDK+ASNESDPEPRQVRIGLERYPSLSLYYPETDSDSSSEDN FP TG WDSLDD +C MWDEDE
Subjt:  EGA--VSCACFEESFVQWNVRAPLEVIYEEYEGEDHDKDASNESDPEPRQVRIGLERYPSLSLYYPETDSDSSSEDNEFPATGAWDSLDDKVCFMWDEDE

Query:  DRDELIEIALDKTSKKASEFQLEEDNL--IEIDISPTRINHEFP
        DRDELIEIALDKT+KKASEF LEEDNL  IEIDISPTR + EFP
Subjt:  DRDELIEIALDKTSKKASEFQLEEDNL--IEIDISPTRINHEFP

A0A6J1KY66 uncharacterized protein LOC111497433

5.2e-91

77.73

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Query:  SPTISIS--SHPLFSTLLTFSAVILLYFPRLLWRILLSPVFLLTGFLLLSLLRLGATQRSFLRQ-SQTVSEIECRQSSENDAVVRSEEDCGRNDAVSEGS
        +PT+SIS  S PL STLL+F A+ LLYFPRLLWRIL SP+FLLTGFLLLSLLRLGATQRSFLRQ +   ++IEC +S+ENDA V+SE     +++VS GS
Subjt:  SPTISIS--SHPLFSTLLTFSAVILLYFPRLLWRILLSPVFLLTGFLLLSLLRLGATQRSFLRQ-SQTVSEIECRQSSENDAVVRSEEDCGRNDAVSEGS

Query:  EGA--VSCACFEESFVQWNVRAPLEVIYEEYEGEDHDKDASNESDPEPRQVRIGLERYPSLSLYYPETDSDSSSEDNEFPATGAWDSLDDKVCFMWDEDE
        + A  VSC CFEESFVQWNVRAPLEVIYEEYEGEDHDK+ASNESDPEPRQVRIGLERYPSLSLYYPETDSDSSSEDN FP TG WDSLDD +C MWDEDE
Subjt:  EGA--VSCACFEESFVQWNVRAPLEVIYEEYEGEDHDKDASNESDPEPRQVRIGLERYPSLSLYYPETDSDSSSEDNEFPATGAWDSLDDKVCFMWDEDE

Query:  DRDELIEIALDKTSKKASEFQLEEDNL--IEIDISPTRINHEFPDVK
        DRDELIEIALDKT+KKASEF LEEDNL  IEIDISP R + EFP  K
Subjt:  DRDELIEIALDKTSKKASEFQLEEDNL--IEIDISPTRINHEFPDVK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G05018.1 unknown protein

1.1e-08

31.08

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Query:  SHPLFSTLLTFSAVILLYFPRLLWRILLSPVFLLTGFLLLSLLRLGATQRSFLRQSQTVSEIECRQSSENDAVVRSEEDCGRNDAVSEGSEGAVSCACFE
        SHPLFS  ++   + LLYFP+   RIL+S V LL G  L+S L LG+T++S  R            S+E+      +   G N                 
Subjt:  SHPLFSTLLTFSAVILLYFPRLLWRILLSPVFLLTGFLLLSLLRLGATQRSFLRQSQTVSEIECRQSSENDAVVRSEEDCGRNDAVSEGSEGAVSCACFE

Query:  ESFVQWNVR--APLEVIYEEYEGEDHDKDASNESDPEPRQVRIGLERYPSLSLYYPETDSDSSSEDNEFPATGAWDSLDDKVCFMWDEDEDRDELIEIAL
          F++WN +  APLEVI++E E    ++  +   DP  R V I  +R+PSLS++ PE+DS+    D +FP              M + D  R   +E ++
Subjt:  ESFVQWNVR--APLEVIYEEYEGEDHDKDASNESDPEPRQVRIGLERYPSLSLYYPETDSDSSSEDNEFPATGAWDSLDDKVCFMWDEDEDRDELIEIAL

Query:  DKTSKKASEFQLEEDNLIEIDI
           S    ++  E DN + ID+
Subjt:  DKTSKKASEFQLEEDNLIEIDI

AT4G21500.1 unknown protein

5.6e-29

41.7

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Query:  SHPLFSTLLTFSAVILLYFPRLLWRILLSPVFLLTGFLLLSLLRLGATQRSFLRQSQTVSEIECRQSSENDAVVRSEEDCGRNDAVSEGSEGAVSCACFE
        SHPLFS  +T  ++IL+YFP  L RI LSPV L++G LLLSLLRLG+T     R+  T  +    +S E    +  E D                     
Subjt:  SHPLFSTLLTFSAVILLYFPRLLWRILLSPVFLLTGFLLLSLLRLGATQRSFLRQSQTVSEIECRQSSENDAVVRSEEDCGRNDAVSEGSEGAVSCACFE

Query:  ESFVQWNVRAPLEVIYEEYEGEDHDKDASNESDPEPRQVRIGLERYPSLSLYYPETDSDS---SSEDNEFPATGAWDSLDDKVCFMWDEDEDR---DELI
          FV+WN+RAPLEVI+E YE E+ +     E + +P + R  +ER+PSLSL YPE+DS+S   SS +  FP  G W+S  + + F W+EDE     + LI
Subjt:  ESFVQWNVRAPLEVIYEEYEGEDHDKDASNESDPEPRQVRIGLERYPSLSLYYPETDSDS---SSEDNEFPATGAWDSLDDKVCFMWDEDEDR---DELI

Query:  EIALD-------KTSKKASEFQLEEDNLIEIDISP
        EI LD         SK   +F  EED LIEID+ P
Subjt:  EIALD-------KTSKKASEFQLEEDNLIEIDISP

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCGCCTACCATTTCCATTTCCTCCCATCCTCTGTTTTCTACTCTCCTCACTTTCTCCGCTGTCATTCTCCTCTACTTCCCTCGCCTTCTATGGAGAATCCTCCTCTC
TCCGGTCTTCCTCCTCACCGGATTCCTCCTGCTCTCTCTCCTTCGTCTCGGTGCAACTCAGAGATCGTTCCTTCGCCAATCTCAAACCGTCTCTGAAATTGAATGCCGAC
AATCGTCCGAAAACGACGCAGTCGTACGATCGGAGGAAGACTGCGGCCGGAACGACGCCGTAAGCGAAGGATCAGAAGGTGCTGTTTCGTGTGCGTGCTTCGAGGAATCT
TTCGTACAGTGGAACGTGAGGGCGCCGTTGGAGGTTATTTACGAAGAGTACGAAGGCGAAGATCACGATAAGGACGCGTCGAACGAGAGCGATCCGGAGCCTCGACAGGT
ACGCATCGGACTGGAGAGGTATCCGTCGCTGTCGCTGTACTATCCGGAAACGGACTCCGATAGCTCGTCGGAGGACAATGAGTTTCCGGCGACCGGAGCGTGGGATTCAC
TCGATGATAAAGTGTGTTTCATGTGGGATGAGGATGAAGACAGGGACGAACTCATCGAGATTGCGTTGGATAAGACGAGCAAGAAGGCATCGGAATTTCAGTTGGAGGAG
GACAATTTGATAGAGATCGATATTTCTCCAACGAGGATCAACCATGAGTTCCCCGACGTAAAATAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MSPTISISSHPLFSTLLTFSAVILLYFPRLLWRILLSPVFLLTGFLLLSLLRLGATQRSFLRQSQTVSEIECRQSSENDAVVRSEEDCGRNDAVSEGSEGAVSCACFEES
FVQWNVRAPLEVIYEEYEGEDHDKDASNESDPEPRQVRIGLERYPSLSLYYPETDSDSSSEDNEFPATGAWDSLDDKVCFMWDEDEDRDELIEIALDKTSKKASEFQLEE
DNLIEIDISPTRINHEFPDVK

Spg011781 (gene) of Sponge gourd (cylindrica) v1 genome