; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg011806 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg011806
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRING-H2 finger protein ATL74-like
Genome locationscaffold1:646665..647443
RNA-Seq ExpressionSpg011806
SyntenySpg011806
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052444.1 RING-H2 finger protein ATL74-like [Cucumis melo var. makuwa]1.3e-5279.7Show/hide
Query:  MEPASSSSLNPSPSISFPGPHEQEQGGNMSRVVIVAAIVCAVVCALGLNTMLTCILQCANHSLRQTVQWVALRGLNSGMKKKDMVALPTSTYRNSGSPTS
        MEP+SS SLNPSPS+S   P E E GGN + +VIV AIVCAVVC LGLNTML CILQCANHS RQTVQWVALRGLNSGMKK+D+VALPTSTY NSGSPTS
Subjt:  MEPASSSSLNPSPSISFPGPHEQEQGGNMSRVVIVAAIVCAVVCALGLNTMLTCILQCANHSLRQTVQWVALRGLNSGMKKKDMVALPTSTYRNSGSPTS

Query:  PSSTSACAICLVDFSNGDKIRELPNCTHKYHIT
        PSSTSACAICL+DFSNGD IR LPNC H+YH++
Subjt:  PSSTSACAICLVDFSNGDKIRELPNCTHKYHIT

KAE8647779.1 hypothetical protein Csa_003277 [Cucumis sativus]4.5e-5367.7Show/hide
Query:  MEPASSSSLNPSPSISFPGPHEQEQGGNMSRVVIVAAIVCAVVCALGLNTMLTCILQCANHSLRQTVQWVALRGLNSGMKKKDMVALPTSTYRNSGSPTS
        MEP+ S SLNPSPS+S   PHE   GGN + +V+V AIVCAVVC LGLNTML CILQCANHSLRQTVQWVALRGLNSGMKK+DMVALPTSTY NSGSP S
Subjt:  MEPASSSSLNPSPSISFPGPHEQEQGGNMSRVVIVAAIVCAVVCALGLNTMLTCILQCANHSLRQTVQWVALRGLNSGMKKKDMVALPTSTYRNSGSPTS

Query:  PSSTSACAICLVDFSNGDKIRELPNCTHKYHIT------LCNVKCNGMNQEAVLSESVDEM
        PSSTSACAICL+DFSNGDK+R LPNC H+YH++      L +  C     +    +S+D +
Subjt:  PSSTSACAICLVDFSNGDKIRELPNCTHKYHIT------LCNVKCNGMNQEAVLSESVDEM

XP_008439485.1 PREDICTED: RING-H2 finger protein ATL74-like [Cucumis melo]1.5e-5179.26Show/hide
Query:  MEPASSSSLNPSPSISFPGPHEQEQGGNMSRVVIVAAIVCAVVCALGLNTMLTCILQCANHSLRQTVQWVALRGLNSGMKKKDMVALPTSTYRNSGSPT-
        MEP+SS SLNPSPS+S   P E E GGN + +VIV AIVCAVVC LGLNTML CILQCANHSLRQTVQWVALRGLNSGMKK+D+VALPTSTY NSGSPT 
Subjt:  MEPASSSSLNPSPSISFPGPHEQEQGGNMSRVVIVAAIVCAVVCALGLNTMLTCILQCANHSLRQTVQWVALRGLNSGMKKKDMVALPTSTYRNSGSPT-

Query:  -SPSSTSACAICLVDFSNGDKIRELPNCTHKYHIT
         SPSSTSACAICL+DFSNGD IR LPNC H+YH++
Subjt:  -SPSSTSACAICLVDFSNGDKIRELPNCTHKYHIT

XP_022146710.1 RING-H2 finger protein ATL74-like [Momordica charantia]3.6e-5067.08Show/hide
Query:  MEPASSSSLNPSPSISFPGPHEQEQGGNMSRVVIVAAIVCAVVCALGLNTMLTCILQCANHSLRQTVQWVALRGLNSGMKKKDMVALPTSTYRNSGSPTS
        ME ASS S+NPSPSI FP PHE+E G N S +VIVAAI CAVVC +GLNTMLTCILQCA H+LRQTVQWVALRGLNSGMKK+DMVALPTSTYRNS SP  
Subjt:  MEPASSSSLNPSPSISFPGPHEQEQGGNMSRVVIVAAIVCAVVCALGLNTMLTCILQCANHSLRQTVQWVALRGLNSGMKKKDMVALPTSTYRNSGSPTS

Query:  PSSTSACAICLVDFSNGDKIRELPNCTHKYHIT------LCNVKCNGMNQEAVLSESVDEM
           TS CAICLVDF NGD+IR LPNCTH+YH+T      LC+  C     +    +S+  +
Subjt:  PSSTSACAICLVDFSNGDKIRELPNCTHKYHIT------LCNVKCNGMNQEAVLSESVDEM

XP_022977991.1 RING-H2 finger protein ATL74-like [Cucurbita maxima]4.4e-4876.87Show/hide
Query:  MEPASS--SSLNPSPSISFPGPHEQEQGGNMSRVVIVAAIVCAVVCALGLNTMLTCILQCANHSLRQTVQWVALRGLNSGMKKKDMVALPTSTYRNSGSP
        MEP+SS   S NP PS+SF  PH+QEQG N + VVIVAAIVCAVVC LGLNTMLTCILQCANH+LRQTVQWVALRGLN GMKK+DM+ALPTSTY NS SP
Subjt:  MEPASS--SSLNPSPSISFPGPHEQEQGGNMSRVVIVAAIVCAVVCALGLNTMLTCILQCANHSLRQTVQWVALRGLNSGMKKKDMVALPTSTYRNSGSP

Query:  TSPSSTSACAICLVDFSNGDKIRELPNCTHKYHI
             TSACAICLVDFSNGDK+R LPNC H+YH+
Subjt:  TSPSSTSACAICLVDFSNGDKIRELPNCTHKYHI

TrEMBL top hitse value%identityAlignment
A0A0A0KJ24 RING-type domain-containing protein2.2e-5367.7Show/hide
Query:  MEPASSSSLNPSPSISFPGPHEQEQGGNMSRVVIVAAIVCAVVCALGLNTMLTCILQCANHSLRQTVQWVALRGLNSGMKKKDMVALPTSTYRNSGSPTS
        MEP+ S SLNPSPS+S   PHE   GGN + +V+V AIVCAVVC LGLNTML CILQCANHSLRQTVQWVALRGLNSGMKK+DMVALPTSTY NSGSP S
Subjt:  MEPASSSSLNPSPSISFPGPHEQEQGGNMSRVVIVAAIVCAVVCALGLNTMLTCILQCANHSLRQTVQWVALRGLNSGMKKKDMVALPTSTYRNSGSPTS

Query:  PSSTSACAICLVDFSNGDKIRELPNCTHKYHIT------LCNVKCNGMNQEAVLSESVDEM
        PSSTSACAICL+DFSNGDK+R LPNC H+YH++      L +  C     +    +S+D +
Subjt:  PSSTSACAICLVDFSNGDKIRELPNCTHKYHIT------LCNVKCNGMNQEAVLSESVDEM

A0A1S3AYW1 RING-H2 finger protein ATL74-like7.1e-5279.26Show/hide
Query:  MEPASSSSLNPSPSISFPGPHEQEQGGNMSRVVIVAAIVCAVVCALGLNTMLTCILQCANHSLRQTVQWVALRGLNSGMKKKDMVALPTSTYRNSGSPT-
        MEP+SS SLNPSPS+S   P E E GGN + +VIV AIVCAVVC LGLNTML CILQCANHSLRQTVQWVALRGLNSGMKK+D+VALPTSTY NSGSPT 
Subjt:  MEPASSSSLNPSPSISFPGPHEQEQGGNMSRVVIVAAIVCAVVCALGLNTMLTCILQCANHSLRQTVQWVALRGLNSGMKKKDMVALPTSTYRNSGSPT-

Query:  -SPSSTSACAICLVDFSNGDKIRELPNCTHKYHIT
         SPSSTSACAICL+DFSNGD IR LPNC H+YH++
Subjt:  -SPSSTSACAICLVDFSNGDKIRELPNCTHKYHIT

A0A5A7UAN6 RING-H2 finger protein ATL74-like6.4e-5379.7Show/hide
Query:  MEPASSSSLNPSPSISFPGPHEQEQGGNMSRVVIVAAIVCAVVCALGLNTMLTCILQCANHSLRQTVQWVALRGLNSGMKKKDMVALPTSTYRNSGSPTS
        MEP+SS SLNPSPS+S   P E E GGN + +VIV AIVCAVVC LGLNTML CILQCANHS RQTVQWVALRGLNSGMKK+D+VALPTSTY NSGSPTS
Subjt:  MEPASSSSLNPSPSISFPGPHEQEQGGNMSRVVIVAAIVCAVVCALGLNTMLTCILQCANHSLRQTVQWVALRGLNSGMKKKDMVALPTSTYRNSGSPTS

Query:  PSSTSACAICLVDFSNGDKIRELPNCTHKYHIT
        PSSTSACAICL+DFSNGD IR LPNC H+YH++
Subjt:  PSSTSACAICLVDFSNGDKIRELPNCTHKYHIT

A0A6J1CY10 RING-H2 finger protein ATL74-like1.7e-5067.08Show/hide
Query:  MEPASSSSLNPSPSISFPGPHEQEQGGNMSRVVIVAAIVCAVVCALGLNTMLTCILQCANHSLRQTVQWVALRGLNSGMKKKDMVALPTSTYRNSGSPTS
        ME ASS S+NPSPSI FP PHE+E G N S +VIVAAI CAVVC +GLNTMLTCILQCA H+LRQTVQWVALRGLNSGMKK+DMVALPTSTYRNS SP  
Subjt:  MEPASSSSLNPSPSISFPGPHEQEQGGNMSRVVIVAAIVCAVVCALGLNTMLTCILQCANHSLRQTVQWVALRGLNSGMKKKDMVALPTSTYRNSGSPTS

Query:  PSSTSACAICLVDFSNGDKIRELPNCTHKYHIT------LCNVKCNGMNQEAVLSESVDEM
           TS CAICLVDF NGD+IR LPNCTH+YH+T      LC+  C     +    +S+  +
Subjt:  PSSTSACAICLVDFSNGDKIRELPNCTHKYHIT------LCNVKCNGMNQEAVLSESVDEM

A0A6J1ILJ0 RING-H2 finger protein ATL74-like2.1e-4876.87Show/hide
Query:  MEPASS--SSLNPSPSISFPGPHEQEQGGNMSRVVIVAAIVCAVVCALGLNTMLTCILQCANHSLRQTVQWVALRGLNSGMKKKDMVALPTSTYRNSGSP
        MEP+SS   S NP PS+SF  PH+QEQG N + VVIVAAIVCAVVC LGLNTMLTCILQCANH+LRQTVQWVALRGLN GMKK+DM+ALPTSTY NS SP
Subjt:  MEPASS--SSLNPSPSISFPGPHEQEQGGNMSRVVIVAAIVCAVVCALGLNTMLTCILQCANHSLRQTVQWVALRGLNSGMKKKDMVALPTSTYRNSGSP

Query:  TSPSSTSACAICLVDFSNGDKIRELPNCTHKYHI
             TSACAICLVDFSNGDK+R LPNC H+YH+
Subjt:  TSPSSTSACAICLVDFSNGDKIRELPNCTHKYHI

SwissProt top hitse value%identityAlignment
Q6NQG7 RING-H2 finger protein ATL788.4e-1026.62Show/hide
Query:  NPSPSISFPGPHEQEQGGNMSRVVIVAAIVCAVVCALGLNTMLTCILQCANHSLRQT-VQWVALRGLNSGMKKKDMVALPTSTYRNSGSPTSPSSTSACA
        +P+P+   P P+  +   + + V++++ ++CA+VC+LGLN+++ C L+C+N    +       +R  N+G+K+K + +  T +Y  S     P   + CA
Subjt:  NPSPSISFPGPHEQEQGGNMSRVVIVAAIVCAVVCALGLNTMLTCILQCANHSLRQT-VQWVALRGLNSGMKKKDMVALPTSTYRNSGSPTSPSSTSACA

Query:  ICLVDFSNGDKIRELPNCTHKYHITLCNVKCNGMNQ----EAVLSESVDEMADC
        ICL +F   ++++ LP C H +H+   +   +  +        L ++ +++ADC
Subjt:  ICLVDFSNGDKIRELPNCTHKYHITLCNVKCNGMNQ----EAVLSESVDEMADC

Q9FLC6 RING-H2 finger protein ATL735.3e-1234.65Show/hide
Query:  VVIVAAIVCAVVCALGLNTMLTCILQCANHSLRQTVQWVALRGLNSGMKKKDMVALPTSTYRNSGSPTSPSSTSACAICLVDFSNGDKIRELPNCTHKYH
        V+I+AA++CA++CALG+N++L C+L+C                +  G+KK+ +  +P  +Y    SP      + C ICL DF  G+ +R LP C H +H
Subjt:  VVIVAAIVCAVVCALGLNTMLTCILQCANHSLRQTVQWVALRGLNSGMKKKDMVALPTSTYRNSGSPTSPSSTSACAICLVDFSNGDKIRELPNCTHKYH

Query:  I
        +
Subjt:  I

Q9LM69 RING-H2 finger protein ATL805.8e-1137.78Show/hide
Query:  SLNPSPSISFPGPHEQEQGGNMSRVVIVAAIVCAVVCALGLNTMLTCI----LQCANH----SLRQTVQWVALRGLNSGMKKKDMVALPTSTYRNSGSPT
        S  PSP+I            N   VVI+AA++CA++C LGL  +  C+    L   N     S  Q+ Q   +   N G+KKK + +LP  T+    SP 
Subjt:  SLNPSPSISFPGPHEQEQGGNMSRVVIVAAIVCAVVCALGLNTMLTCI----LQCANH----SLRQTVQWVALRGLNSGMKKKDMVALPTSTYRNSGSPT

Query:  SPSST--SACAICLVDFSNGDKIRELPNCTHKYHI
        SP S   + CAICL +FS GD++R LP C H +H+
Subjt:  SPSST--SACAICLVDFSNGDKIRELPNCTHKYHI

Q9LZV8 RING-H2 finger protein ATL743.4e-1133.33Show/hide
Query:  HEQEQGGNMSRVVIVAAIVCAVVCALGLNTMLTCILQCA-NHSLRQTVQWVALRGLNSGMKKKDMVALPTSTYRNSGSPTSPSSTSACAICLVDFSNGDK
        + ++   + + V+I+AA++CA++ ALGLN++L C ++C    S       VA R   +G+KK+++   P + Y   GS     + + CAICL +F++G++
Subjt:  HEQEQGGNMSRVVIVAAIVCAVVCALGLNTMLTCILQCA-NHSLRQTVQWVALRGLNSGMKKKDMVALPTSTYRNSGSPTSPSSTSACAICLVDFSNGDK

Query:  IRELPNCTHKYHIT
        +R LP C H +H++
Subjt:  IRELPNCTHKYHIT

Q9ZT49 Probable E3 ubiquitin-protein ligase ATL451.7e-1034.62Show/hide
Query:  PGPHEQEQGGNMSRVVIVAAIVCAVVCALGLNTMLTCILQCANHSLRQTVQWVALRGL---NSGMKKKDMVALPTSTYRNSGSPTSPS------------
        P P E+        VVI++A++CA+VC  G    L  + +CA       V   A+      N G+KKK + ALP STY  S S  + +            
Subjt:  PGPHEQEQGGNMSRVVIVAAIVCAVVCALGLNTMLTCILQCANHSLRQTVQWVALRGL---NSGMKKKDMVALPTSTYRNSGSPTSPS------------

Query:  STSACAICLVDFSNGDKIRELPNCTHKYHI
        S++ CAIC+ +FS G++IR LP C+H +H+
Subjt:  STSACAICLVDFSNGDKIRELPNCTHKYHI

Arabidopsis top hitse value%identityAlignment
AT1G20823.1 RING/U-box superfamily protein4.2e-1237.78Show/hide
Query:  SLNPSPSISFPGPHEQEQGGNMSRVVIVAAIVCAVVCALGLNTMLTCI----LQCANH----SLRQTVQWVALRGLNSGMKKKDMVALPTSTYRNSGSPT
        S  PSP+I            N   VVI+AA++CA++C LGL  +  C+    L   N     S  Q+ Q   +   N G+KKK + +LP  T+    SP 
Subjt:  SLNPSPSISFPGPHEQEQGGNMSRVVIVAAIVCAVVCALGLNTMLTCI----LQCANH----SLRQTVQWVALRGLNSGMKKKDMVALPTSTYRNSGSPT

Query:  SPSST--SACAICLVDFSNGDKIRELPNCTHKYHI
        SP S   + CAICL +FS GD++R LP C H +H+
Subjt:  SPSST--SACAICLVDFSNGDKIRELPNCTHKYHI

AT1G49230.1 RING/U-box superfamily protein6.0e-1126.62Show/hide
Query:  NPSPSISFPGPHEQEQGGNMSRVVIVAAIVCAVVCALGLNTMLTCILQCANHSLRQT-VQWVALRGLNSGMKKKDMVALPTSTYRNSGSPTSPSSTSACA
        +P+P+   P P+  +   + + V++++ ++CA+VC+LGLN+++ C L+C+N    +       +R  N+G+K+K + +  T +Y  S     P   + CA
Subjt:  NPSPSISFPGPHEQEQGGNMSRVVIVAAIVCAVVCALGLNTMLTCILQCANHSLRQT-VQWVALRGLNSGMKKKDMVALPTSTYRNSGSPTSPSSTSACA

Query:  ICLVDFSNGDKIRELPNCTHKYHITLCNVKCNGMNQ----EAVLSESVDEMADC
        ICL +F   ++++ LP C H +H+   +   +  +        L ++ +++ADC
Subjt:  ICLVDFSNGDKIRELPNCTHKYHITLCNVKCNGMNQ----EAVLSESVDEMADC

AT4G35480.1 RING-H2 finger A3B1.2e-1134.62Show/hide
Query:  PGPHEQEQGGNMSRVVIVAAIVCAVVCALGLNTMLTCILQCANHSLRQTVQWVALRGL---NSGMKKKDMVALPTSTYRNSGSPTSPS------------
        P P E+        VVI++A++CA+VC  G    L  + +CA       V   A+      N G+KKK + ALP STY  S S  + +            
Subjt:  PGPHEQEQGGNMSRVVIVAAIVCAVVCALGLNTMLTCILQCANHSLRQTVQWVALRGL---NSGMKKKDMVALPTSTYRNSGSPTSPS------------

Query:  STSACAICLVDFSNGDKIRELPNCTHKYHI
        S++ CAIC+ +FS G++IR LP C+H +H+
Subjt:  STSACAICLVDFSNGDKIRELPNCTHKYHI

AT5G01880.1 RING/U-box superfamily protein2.4e-1233.33Show/hide
Query:  HEQEQGGNMSRVVIVAAIVCAVVCALGLNTMLTCILQCA-NHSLRQTVQWVALRGLNSGMKKKDMVALPTSTYRNSGSPTSPSSTSACAICLVDFSNGDK
        + ++   + + V+I+AA++CA++ ALGLN++L C ++C    S       VA R   +G+KK+++   P + Y   GS     + + CAICL +F++G++
Subjt:  HEQEQGGNMSRVVIVAAIVCAVVCALGLNTMLTCILQCA-NHSLRQTVQWVALRGLNSGMKKKDMVALPTSTYRNSGSPTSPSSTSACAICLVDFSNGDK

Query:  IRELPNCTHKYHIT
        +R LP C H +H++
Subjt:  IRELPNCTHKYHIT

AT5G05280.1 RING/U-box superfamily protein3.8e-1334.65Show/hide
Query:  VVIVAAIVCAVVCALGLNTMLTCILQCANHSLRQTVQWVALRGLNSGMKKKDMVALPTSTYRNSGSPTSPSSTSACAICLVDFSNGDKIRELPNCTHKYH
        V+I+AA++CA++CALG+N++L C+L+C                +  G+KK+ +  +P  +Y    SP      + C ICL DF  G+ +R LP C H +H
Subjt:  VVIVAAIVCAVVCALGLNTMLTCILQCANHSLRQTVQWVALRGLNSGMKKKDMVALPTSTYRNSGSPTSPSSTSACAICLVDFSNGDKIRELPNCTHKYH

Query:  I
        +
Subjt:  I


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCCTGCATCCTCTTCTTCCCTTAATCCCTCACCAAGCATATCTTTCCCGGGTCCTCACGAGCAAGAGCAAGGTGGCAACATGAGCCGTGTTGTCATTGTGGCTGC
CATTGTTTGCGCTGTTGTATGCGCACTCGGTCTAAATACCATGCTGACATGTATACTTCAATGCGCCAATCATAGCCTCAGACAGACAGTCCAATGGGTGGCTTTAAGGG
GACTGAACTCAGGCATGAAGAAGAAAGACATGGTTGCCCTGCCAACTTCAACTTACAGGAATTCTGGCTCACCGACTTCGCCTTCATCAACTTCAGCCTGTGCTATCTGC
CTCGTTGATTTCTCGAACGGGGATAAAATACGGGAGTTGCCAAACTGTACTCATAAGTACCATATCACATTGTGTAATGTCAAGTGTAATGGCATGAATCAAGAAGCAGT
ACTTAGTGAATCAGTTGATGAAATGGCTGACTGCAAGCTTCAACAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCCTGCATCCTCTTCTTCCCTTAATCCCTCACCAAGCATATCTTTCCCGGGTCCTCACGAGCAAGAGCAAGGTGGCAACATGAGCCGTGTTGTCATTGTGGCTGC
CATTGTTTGCGCTGTTGTATGCGCACTCGGTCTAAATACCATGCTGACATGTATACTTCAATGCGCCAATCATAGCCTCAGACAGACAGTCCAATGGGTGGCTTTAAGGG
GACTGAACTCAGGCATGAAGAAGAAAGACATGGTTGCCCTGCCAACTTCAACTTACAGGAATTCTGGCTCACCGACTTCGCCTTCATCAACTTCAGCCTGTGCTATCTGC
CTCGTTGATTTCTCGAACGGGGATAAAATACGGGAGTTGCCAAACTGTACTCATAAGTACCATATCACATTGTGTAATGTCAAGTGTAATGGCATGAATCAAGAAGCAGT
ACTTAGTGAATCAGTTGATGAAATGGCTGACTGCAAGCTTCAACAGTGA
Protein sequenceShow/hide protein sequence
MEPASSSSLNPSPSISFPGPHEQEQGGNMSRVVIVAAIVCAVVCALGLNTMLTCILQCANHSLRQTVQWVALRGLNSGMKKKDMVALPTSTYRNSGSPTSPSSTSACAIC
LVDFSNGDKIRELPNCTHKYHITLCNVKCNGMNQEAVLSESVDEMADCKLQQ