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Spg011838 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg011838
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold1:4279509..4280563
RNA-Seq ExpressionSpg011838
SyntenySpg011838
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594694.1 hypothetical protein SDJN03_11247, partial [Cucurbita argyrosperma subsp. sororia]8.2e-2136.03Show/hide
Query:  MAFSSLPNFIHFPTSISISNSSLPPPSLPPSS--------PLSAKRRGSLCVKCHGGGPD--PEKKDNGHEKDPLETIAELYKGIKNKDVAHLADVIDDQ
        MAFSS  N IH P SIS SNSS    +   ++        P +AK +  LCVKC+G      P K DN ++K  L+ + +LY+ IKNK++  + +VI D+
Subjt:  MAFSSLPNFIHFPTSISISNSSLPPPSLPPSS--------PLSAKRRGSLCVKCHGGGPD--PEKKDNGHEKDPLETIAELYKGIKNKDVAHLADVIDDQ

Query:  YPNVAR--------------------------------------------------WNKPLMESGKGVRIYSHHTYVGKLLIG-----------------
         P+                                                     W + LM  GKG+ I SHH YVGKLLIG                 
Subjt:  YPNVAR--------------------------------------------------WNKPLMESGKGVRIYSHHTYVGKLLIG-----------------

Query:  ITNVFGAEELELGAKKTEKSSIAVSGFLPPRSLALLFPVFCSLKAGV
        ++ VFGAE  E GA K E SS  VSG L   SLALL PVFCSL AGV
Subjt:  ITNVFGAEELELGAKKTEKSSIAVSGFLPPRSLALLFPVFCSLKAGV

KAG7026664.1 hypothetical protein SDJN02_10667, partial [Cucurbita argyrosperma subsp. argyrosperma]8.0e-1643.04Show/hide
Query:  MAFSSLPNFIHFPTSISISNSSLPPPSLP------PSSPLSAKRRGSLCVKCHGGGPDPEKKDNGHEKDPLETIAELYKGIKNKDVAHLADVIDDQYPNV
        +AFSS P+F+HFP SIS SN  L  PSLP      PS   SAKRR SL VKCHGG  +P+K      KDP ETI +LYK IKN+ +A L      + PN 
Subjt:  MAFSSLPNFIHFPTSISISNSSLPPPSLP------PSSPLSAKRRGSLCVKCHGGGPDPEKKDNGHEKDPLETIAELYKGIKNKDVAHLADVIDDQYPNV

Query:  AR------------------------------WNKPLMESGKGVRIYSHHTYVGKLLI
                                        W+KPLM    GV I+ H +YVGKLLI
Subjt:  AR------------------------------WNKPLMESGKGVRIYSHHTYVGKLLI

XP_008440070.1 PREDICTED: uncharacterized protein LOC103484658 [Cucumis melo]5.9e-1939.25Show/hide
Query:  AFSSLPNFIHFPTSISISNSS------------LPPPSLPPSSPLSAK--RRGSLCVKCHGGGPDPEKK---DNGHEKDPLETIAELYKGIKNKDVAHLA
        A SSL NFIHFPTS SIS++S            +   S  P  PLS K  RR SLCV+CHGGG    K    ++ +++DPLETI ++YK IK KDV  LA
Subjt:  AFSSLPNFIHFPTSISISNSS------------LPPPSLPPSSPLSAK--RRGSLCVKCHGGGPDPEKK---DNGHEKDPLETIAELYKGIKNKDVAHLA

Query:  DVIDDQYPNV-----------------------------------------------ARWNKPLMESGKGVRIYSHHTYVGKLLIG
        +VI DQ P++                                                 W KPL++S KG+ I+SHH+YVGKLLIG
Subjt:  DVIDDQYPNV-----------------------------------------------ARWNKPLMESGKGVRIYSHHTYVGKLLIG

XP_038883269.1 uncharacterized protein LOC120074268 isoform X1 [Benincasa hispida]1.9e-2543.94Show/hide
Query:  MAFSSLPNFIHFPTSISISNS---------SLPPPSLPPSSPLSAKRRGSLCVKCHGGGPDPEKKDNGHEKDPLETIAELYKGIKNKDVAHLADVIDDQY
        MA SSLPNFIHFP S SISNS         S     LPP  PLSAKRR SLCVKCH G P+ E KD+  + DPLETI +LYKGIK KD+A L++VI ++ 
Subjt:  MAFSSLPNFIHFPTSISISNS---------SLPPPSLPPSSPLSAKRRGSLCVKCHGGGPDPEKKDNGHEKDPLETIAELYKGIKNKDVAHLADVIDDQY

Query:  PNV-----------------------------------------------ARWNKPLMESGKGVRIYSHHTYVGKLLIGITNVFGAEELELGAKKTEK
        P++                                                 W+KPLMES +GV I+SHH+YVGKLLIG   +     L+LG  KT K
Subjt:  PNV-----------------------------------------------ARWNKPLMESGKGVRIYSHHTYVGKLLIGITNVFGAEELELGAKKTEK

XP_038883270.1 uncharacterized protein LOC120074268 isoform X2 [Benincasa hispida]5.3e-2849.43Show/hide
Query:  MAFSSLPNFIHFPTSISISNS---------SLPPPSLPPSSPLSAKRRGSLCVKCHGGGPDPEKKDNGHEKDPLETIAELYKGIKNKDVAHLADVIDDQY
        MA SSLPNFIHFP S SISNS         S     LPP  PLSAKRR SLCVKCH G P+ E KD+  + DPLETI +LYKGIK KD+A L++VI ++ 
Subjt:  MAFSSLPNFIHFPTSISISNS---------SLPPPSLPPSSPLSAKRRGSLCVKCHGGGPDPEKKDNGHEKDPLETIAELYKGIKNKDVAHLADVIDDQY

Query:  PNV-------------------------ARWNKPLMESGKGVRIYSHHTYVGKLLIGITNVFGAEELELGAKKTEK
        P++                           W+KPLMES +GV I+SHH+YVGKLLIG   +     L+LG  KT K
Subjt:  PNV-------------------------ARWNKPLMESGKGVRIYSHHTYVGKLLIGITNVFGAEELELGAKKTEK

TrEMBL top hitse value%identityAlignment
A0A1S3B083 uncharacterized protein LOC1034846582.9e-1939.25Show/hide
Query:  AFSSLPNFIHFPTSISISNSS------------LPPPSLPPSSPLSAK--RRGSLCVKCHGGGPDPEKK---DNGHEKDPLETIAELYKGIKNKDVAHLA
        A SSL NFIHFPTS SIS++S            +   S  P  PLS K  RR SLCV+CHGGG    K    ++ +++DPLETI ++YK IK KDV  LA
Subjt:  AFSSLPNFIHFPTSISISNSS------------LPPPSLPPSSPLSAK--RRGSLCVKCHGGGPDPEKK---DNGHEKDPLETIAELYKGIKNKDVAHLA

Query:  DVIDDQYPNV-----------------------------------------------ARWNKPLMESGKGVRIYSHHTYVGKLLIG
        +VI DQ P++                                                 W KPL++S KG+ I+SHH+YVGKLLIG
Subjt:  DVIDDQYPNV-----------------------------------------------ARWNKPLMESGKGVRIYSHHTYVGKLLIG

A0A6J1EFQ1 uncharacterized protein LOC111433705 isoform X16.6e-1642.31Show/hide
Query:  MAFSSLPNFIHFPTSISISNSSLPPPSLP------PSSPLSAKRRGSLCVKCHGGGPDPEKKDNGHEKDPLETIAELYKGIKNKDVA----------HLA
        +AFSS P+F+HFP SIS SN  L  PSLP      PS   SAKRR SL VKCHGG  +P+K      KDP ETI +LYK IKN+ +A           ++
Subjt:  MAFSSLPNFIHFPTSISISNSSLPPPSLP------PSSPLSAKRRGSLCVKCHGGGPDPEKKDNGHEKDPLETIAELYKGIKNKDVA----------HLA

Query:  DVIDDQYPNV------------------ARWNKPLMESGKGVRIYSHHTYVGKLLI
        + I+     +                    W+KPLM    GV I+ H +YVGKLLI
Subjt:  DVIDDQYPNV------------------ARWNKPLMESGKGVRIYSHHTYVGKLLI

A0A6J1ELN6 uncharacterized protein LOC111433705 isoform X26.6e-1642.31Show/hide
Query:  MAFSSLPNFIHFPTSISISNSSLPPPSLP------PSSPLSAKRRGSLCVKCHGGGPDPEKKDNGHEKDPLETIAELYKGIKNKDVA----------HLA
        +AFSS P+F+HFP SIS SN  L  PSLP      PS   SAKRR SL VKCHGG  +P+K      KDP ETI +LYK IKN+ +A           ++
Subjt:  MAFSSLPNFIHFPTSISISNSSLPPPSLP------PSSPLSAKRRGSLCVKCHGGGPDPEKKDNGHEKDPLETIAELYKGIKNKDVA----------HLA

Query:  DVIDDQYPNV------------------ARWNKPLMESGKGVRIYSHHTYVGKLLI
        + I+     +                    W+KPLM    GV I+ H +YVGKLLI
Subjt:  DVIDDQYPNV------------------ARWNKPLMESGKGVRIYSHHTYVGKLLI

A0A6J1KMF7 uncharacterized protein LOC111497027 isoform X11.1e-1541.46Show/hide
Query:  MAFSSLPNFIHFPTSISISNSSLPPPSLP------PSSPLSAKRRGSLCVKCHGGGPDPEKKDNGHEKDPLETIAELYKGIKNKDVA----------HLA
        +AFSS P+FIHFP SIS SN  L  PSLP      PS   SAKRR SL VKCHGG  +P+K      +DP ETI +LYK IKN+  A           ++
Subjt:  MAFSSLPNFIHFPTSISISNSSLPPPSLP------PSSPLSAKRRGSLCVKCHGGGPDPEKKDNGHEKDPLETIAELYKGIKNKDVA----------HLA

Query:  DVIDDQYPNV------------------ARWNKPLMESGKGVRIYSHHTYVGKLLI-GITNVFG
        + I+     +                    W+KPLM    GV I+ H +YVGKLLI  + N+ G
Subjt:  DVIDDQYPNV------------------ARWNKPLMESGKGVRIYSHHTYVGKLLI-GITNVFG

A0A6J1KWF0 uncharacterized protein LOC111497027 isoform X21.1e-1541.46Show/hide
Query:  MAFSSLPNFIHFPTSISISNSSLPPPSLP------PSSPLSAKRRGSLCVKCHGGGPDPEKKDNGHEKDPLETIAELYKGIKNKDVA----------HLA
        +AFSS P+FIHFP SIS SN  L  PSLP      PS   SAKRR SL VKCHGG  +P+K      +DP ETI +LYK IKN+  A           ++
Subjt:  MAFSSLPNFIHFPTSISISNSSLPPPSLP------PSSPLSAKRRGSLCVKCHGGGPDPEKKDNGHEKDPLETIAELYKGIKNKDVA----------HLA

Query:  DVIDDQYPNV------------------ARWNKPLMESGKGVRIYSHHTYVGKLLI-GITNVFG
        + I+     +                    W+KPLM    GV I+ H +YVGKLLI  + N+ G
Subjt:  DVIDDQYPNV------------------ARWNKPLMESGKGVRIYSHHTYVGKLLI-GITNVFG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTTTCTTCTCTACCAAATTTCATCCATTTCCCCACCTCAATCTCAATCTCAAATAGTTCCCTTCCGCCCCCGTCACTGCCACCGTCTTCGCCGCTGTCGGCCAA
GCGTCGAGGTTCTCTGTGCGTAAAATGCCATGGCGGAGGCCCCGACCCGGAAAAGAAAGATAATGGCCATGAAAAAGACCCTCTCGAAACAATTGCCGAACTTTACAAGG
GCATCAAGAACAAAGACGTTGCACACTTGGCTGATGTTATAGATGATCAATATCCCAATGTCGCTCGGTGGAATAAACCCCTGATGGAGTCGGGAAAGGGAGTCCGTATC
TATTCTCACCATACCTATGTTGGAAAGTTGCTTATTGGAATTACAAATGTTTTTGGAGCAGAAGAATTGGAATTGGGTGCCAAGAAAACAGAGAAAAGTTCCATCGCTGT
GTCTGGGTTTCTTCCTCCTCGTTCTCTCGCTCTTCTTTTTCCAGTTTTCTGTTCGTTAAAGGCCGGCGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTTTTCTTCTCTACCAAATTTCATCCATTTCCCCACCTCAATCTCAATCTCAAATAGTTCCCTTCCGCCCCCGTCACTGCCACCGTCTTCGCCGCTGTCGGCCAA
GCGTCGAGGTTCTCTGTGCGTAAAATGCCATGGCGGAGGCCCCGACCCGGAAAAGAAAGATAATGGCCATGAAAAAGACCCTCTCGAAACAATTGCCGAACTTTACAAGG
GCATCAAGAACAAAGACGTTGCACACTTGGCTGATGTTATAGATGATCAATATCCCAATGTCGCTCGGTGGAATAAACCCCTGATGGAGTCGGGAAAGGGAGTCCGTATC
TATTCTCACCATACCTATGTTGGAAAGTTGCTTATTGGAATTACAAATGTTTTTGGAGCAGAAGAATTGGAATTGGGTGCCAAGAAAACAGAGAAAAGTTCCATCGCTGT
GTCTGGGTTTCTTCCTCCTCGTTCTCTCGCTCTTCTTTTTCCAGTTTTCTGTTCGTTAAAGGCCGGCGTTTGA
Protein sequenceShow/hide protein sequence
MAFSSLPNFIHFPTSISISNSSLPPPSLPPSSPLSAKRRGSLCVKCHGGGPDPEKKDNGHEKDPLETIAELYKGIKNKDVAHLADVIDDQYPNVARWNKPLMESGKGVRI
YSHHTYVGKLLIGITNVFGAEELELGAKKTEKSSIAVSGFLPPRSLALLFPVFCSLKAGV