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Spg011897 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg011897
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase zinc-binding domain
Genome locationscaffold1:484634..487489
RNA-Seq ExpressionSpg011897
SyntenySpg011897
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016020 - membrane (cellular component)
GO:0005488 - binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053637.1 protein RST1 isoform X2 [Cucumis melo var. makuwa]2.3e-1049.28Show/hide
Query:  FASFGLQFARPRGLRETIEEFLPHPPFREQGKFLWQAGICAIIWGLWGERNNRTFRGLERDSHENVMAL
        F S   +F   RG+R TIEEFL H PFRE+G  LW  G+C I+W ++G+RN++ F G ERD H  ++A+
Subjt:  FASFGLQFARPRGLRETIEEFLPHPPFREQGKFLWQAGICAIIWGLWGERNNRTFRGLERDSHENVMAL

KAA0066908.1 mitochondrial phosphate carrier protein 3 [Cucumis melo var. makuwa]6.2e-1657.58Show/hide
Query:  FARTVWDEFFASFGLQFARPRGLRETIEEFLPHPPFREQGKFLWQAGICAIIWGLWGERNNRTFRG
        FAR VW  FF  FG  FA  R +R  IEEFL H PFR++G FLW AG+CA++W +WG+RN+R  RG
Subjt:  FARTVWDEFFASFGLQFARPRGLRETIEEFLPHPPFREQGKFLWQAGICAIIWGLWGERNNRTFRG

TYK19563.1 uncharacterized protein E5676_scaffold416G00660 [Cucumis melo var. makuwa]3.2e-1248.1Show/hide
Query:  MLWSCAFARTVWDEFFASFGLQFARPRGLRETIEEFLPHPPFREQGKFLWQAGICAIIWGLWGERNNRTFRGLERDSHE
        +L  C+F     DEF  S     A  R +R   E F+ HPPF+E+G+FLW A +CAI+W +WGERN+R FRG +RD  E
Subjt:  MLWSCAFARTVWDEFFASFGLQFARPRGLRETIEEFLPHPPFREQGKFLWQAGICAIIWGLWGERNNRTFRGLERDSHE

TYK26833.1 nardilysin-like [Cucumis melo var. makuwa]8.7e-1050Show/hide
Query:  FGLQFARPRGLRETIEEFLPHPPFREQGKFLWQAGICAIIWGLWGERNNRTFRGLERDSHENVMAL
        FG+     R +  TIEEFL HP  RE  +F+W AG+CAI+W +WGERN+R FR  E D  E    L
Subjt:  FGLQFARPRGLRETIEEFLPHPPFREQGKFLWQAGICAIIWGLWGERNNRTFRGLERDSHENVMAL

XP_016900613.1 PREDICTED: uncharacterized protein LOC107990976 [Cucumis melo]3.8e-1349.37Show/hide
Query:  MLWSCAFARTVWDEFFASFGLQFARPRGLRETIEEFLPHPPFREQGKFLWQAGICAIIWGLWGERNNRTFRGLERDSHE
        +L   A A  +WD F  +FGL +AR R +R  IEEFL + P  E+G+FLW+A +CAI+W LW E N R F G+ER + E
Subjt:  MLWSCAFARTVWDEFFASFGLQFARPRGLRETIEEFLPHPPFREQGKFLWQAGICAIIWGLWGERNNRTFRGLERDSHE

TrEMBL top hitse value%identityAlignment
A0A1S4DXB1 uncharacterized protein LOC1079909761.8e-1349.37Show/hide
Query:  MLWSCAFARTVWDEFFASFGLQFARPRGLRETIEEFLPHPPFREQGKFLWQAGICAIIWGLWGERNNRTFRGLERDSHE
        +L   A A  +WD F  +FGL +AR R +R  IEEFL + P  E+G+FLW+A +CAI+W LW E N R F G+ER + E
Subjt:  MLWSCAFARTVWDEFFASFGLQFARPRGLRETIEEFLPHPPFREQGKFLWQAGICAIIWGLWGERNNRTFRGLERDSHE

A0A5A7VGR5 Mitochondrial phosphate carrier protein 33.0e-1657.58Show/hide
Query:  FARTVWDEFFASFGLQFARPRGLRETIEEFLPHPPFREQGKFLWQAGICAIIWGLWGERNNRTFRG
        FAR VW  FF  FG  FA  R +R  IEEFL H PFR++G FLW AG+CA++W +WG+RN+R  RG
Subjt:  FARTVWDEFFASFGLQFARPRGLRETIEEFLPHPPFREQGKFLWQAGICAIIWGLWGERNNRTFRG

A0A5D3BRC0 Protein RST1 isoform X21.1e-1049.28Show/hide
Query:  FASFGLQFARPRGLRETIEEFLPHPPFREQGKFLWQAGICAIIWGLWGERNNRTFRGLERDSHENVMAL
        F S   +F   RG+R TIEEFL H PFRE+G  LW  G+C I+W ++G+RN++ F G ERD H  ++A+
Subjt:  FASFGLQFARPRGLRETIEEFLPHPPFREQGKFLWQAGICAIIWGLWGERNNRTFRGLERDSHENVMAL

A0A5D3D7T2 Uncharacterized protein1.5e-1248.1Show/hide
Query:  MLWSCAFARTVWDEFFASFGLQFARPRGLRETIEEFLPHPPFREQGKFLWQAGICAIIWGLWGERNNRTFRGLERDSHE
        +L  C+F     DEF  S     A  R +R   E F+ HPPF+E+G+FLW A +CAI+W +WGERN+R FRG +RD  E
Subjt:  MLWSCAFARTVWDEFFASFGLQFARPRGLRETIEEFLPHPPFREQGKFLWQAGICAIIWGLWGERNNRTFRGLERDSHE

A0A5D3DT90 Nardilysin-like4.2e-1050Show/hide
Query:  FGLQFARPRGLRETIEEFLPHPPFREQGKFLWQAGICAIIWGLWGERNNRTFRGLERDSHENVMAL
        FG+     R +  TIEEFL HP  RE  +F+W AG+CAI+W +WGERN+R FR  E D  E    L
Subjt:  FGLQFARPRGLRETIEEFLPHPPFREQGKFLWQAGICAIIWGLWGERNNRTFRGLERDSHENVMAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGTGGAGTTGCGCTTTTGCTAGGACGGTGTGGGATGAGTTCTTTGCCTCGTTTGGGTTGCAGTTTGCCAGACCCAGAGGCCTTAGAGAGACGATCGAGGAGTTCCT
CCCCCATCCTCCCTTTAGGGAGCAGGGGAAGTTTTTGTGGCAAGCTGGGATTTGTGCCATTATTTGGGGGCTTTGGGGTGAGAGAAACAATAGAACTTTTAGAGGGTTGG
AGAGGGATTCTCATGAGAACGTCATGGCACTACAAATTCTAGAGTCTGCCCCTGCATTGGGGGGATTTATTTCTCCTTCTTTCTCTTGGCTTTTTGTAACTTTGTTGTGG
AATTTAACAGGAGGCTCGATTGAGCCGTCTAACCTGGTCACACCAAATAGAAGGAGAGATAAGGGAAGGTCCTTTGCTGATATTGTGCGAAGTAAACCGAATGCGCCAAG
TGACCTTCAGAAGAAAAAATATTCCAGCGAATGGAGAGACACCCAAGAACGCAAAGGGTGTATAGAAGCCGTGAGGAAAATTGATTGGAACGAGGTTCTGGTGATTACCA
AACGAGACCTCCACGATGACTGGGGGAGCATTCTAGAGATTTTGCATCAGCAGCTGGAAGAACCTTTTGTTATAAACCTGATAAGGCCCTTCTTAAATGCCCCTCATAAA
AAATGGCTGACTTGCTTTCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGTGGAGTTGCGCTTTTGCTAGGACGGTGTGGGATGAGTTCTTTGCCTCGTTTGGGTTGCAGTTTGCCAGACCCAGAGGCCTTAGAGAGACGATCGAGGAGTTCCT
CCCCCATCCTCCCTTTAGGGAGCAGGGGAAGTTTTTGTGGCAAGCTGGGATTTGTGCCATTATTTGGGGGCTTTGGGGTGAGAGAAACAATAGAACTTTTAGAGGGTTGG
AGAGGGATTCTCATGAGAACGTCATGGCACTACAAATTCTAGAGTCTGCCCCTGCATTGGGGGGATTTATTTCTCCTTCTTTCTCTTGGCTTTTTGTAACTTTGTTGTGG
AATTTAACAGGAGGCTCGATTGAGCCGTCTAACCTGGTCACACCAAATAGAAGGAGAGATAAGGGAAGGTCCTTTGCTGATATTGTGCGAAGTAAACCGAATGCGCCAAG
TGACCTTCAGAAGAAAAAATATTCCAGCGAATGGAGAGACACCCAAGAACGCAAAGGGTGTATAGAAGCCGTGAGGAAAATTGATTGGAACGAGGTTCTGGTGATTACCA
AACGAGACCTCCACGATGACTGGGGGAGCATTCTAGAGATTTTGCATCAGCAGCTGGAAGAACCTTTTGTTATAAACCTGATAAGGCCCTTCTTAAATGCCCCTCATAAA
AAATGGCTGACTTGCTTTCAATGA
Protein sequenceShow/hide protein sequence
MLWSCAFARTVWDEFFASFGLQFARPRGLRETIEEFLPHPPFREQGKFLWQAGICAIIWGLWGERNNRTFRGLERDSHENVMALQILESAPALGGFISPSFSWLFVTLLW
NLTGGSIEPSNLVTPNRRRDKGRSFADIVRSKPNAPSDLQKKKYSSEWRDTQERKGCIEAVRKIDWNEVLVITKRDLHDDWGSILEILHQQLEEPFVINLIRPFLNAPHK
KWLTCFQ