; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg011918 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg011918
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionF-box protein SKIP19-like
Genome locationscaffold1:1319503..1328816
RNA-Seq ExpressionSpg011918
SyntenySpg011918
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001611 - Leucine-rich repeat
IPR001810 - F-box domain
IPR006553 - Leucine-rich repeat, cysteine-containing subtype
IPR032675 - Leucine-rich repeat domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581459.1 F-box protein SKIP19, partial [Cucurbita argyrosperma subsp. sororia]8.5e-10468.06Show/hide
Query:  MESNSVIQS-EAEVRNWLELPAEVMSMIFLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGDLHDMDHDLEIMCRHAVDRSCGQLVDINIEYFG
        MESNS   S   E RNWLELPA+V SMI LKLG ++ILT+AQ+VCSSWRKIC+DPLMWR +DM   GD  DMD+DLE MCR AVDRSCGQL+ INIE+FG
Subjt:  MESNSVIQS-EAEVRNWLELPAEVMSMIFLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGDLHDMDHDLEIMCRHAVDRSCGQLVDINIEYFG

Query:  TDELLQYITQSSNQLKSLRIAVCYDISDEGLIEAVTKLPLLECLEIFICSFEVETLKTVGQRCPLLKSLKLNQQFCRGREMVSDEEAIAIAETMPKLQHL
        TD+LLQYITQSSN+L+ LR+  C  ISDEGLI+AV+KLPLLE LEI   SF+VETL+T+GQ  PLLKSLKLN+QF R  E   D+ A+AIAE MP L+HL
Subjt:  TDELLQYITQSSNQLKSLRIAVCYDISDEGLIEAVTKLPLLECLEIFICSFEVETLKTVGQRCPLLKSLKLNQQFCRGREMVSDEEAIAIAETMPKLQHL

Query:  QIFGNGLTNKGLLAILDGCPDLESLDLRQCLNLNLAGQLGQKCAEKIKILHLPHDPTDGYEFTTEII---NDYDSEDY----ASSDYNTGYVHDHYYGFS
        QIFGN LTN+GL AILDGCPDLESLDLRQC NLNLAGQLG KC+EKIK L LPHDPTD YE++TEI+   +DY+ EDY      SD +     D YY FS
Subjt:  QIFGNGLTNKGLLAILDGCPDLESLDLRQCLNLNLAGQLGQKCAEKIKILHLPHDPTDGYEFTTEII---NDYDSEDY----ASSDYNTGYVHDHYYGFS

Query:  EDSDFFDYDD
          SDF DY D
Subjt:  EDSDFFDYDD

KAG7034751.1 Protein BREAST CANCER SUSCEPTIBILITY 1-like protein [Cucurbita argyrosperma subsp. argyrosperma]2.6e-10568.25Show/hide
Query:  MESNSVIQS-EAEVRNWLELPAEVMSMIFLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGDLHDMDHDLEIMCRHAVDRSCGQLVDINIEYFG
        MESNS   S   E RNWLELPA+V SMI LKLG ++ILT+AQ+VCSSWRKIC+DPLMWR +DM   GD  DMD+DLE MCR AVDRSCGQL+ INIE+FG
Subjt:  MESNSVIQS-EAEVRNWLELPAEVMSMIFLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGDLHDMDHDLEIMCRHAVDRSCGQLVDINIEYFG

Query:  TDELLQYITQSSNQLKSLRIAVCYDISDEGLIEAVTKLPLLECLEIFICSFEVETLKTVGQRCPLLKSLKLNQQFCRGREMVSDEEAIAIAETMPKLQHL
        TD+LLQYITQSSNQL+ LR+  C  ISDEGLI+AV+KLPLLE LEI   SF+VETL+T+GQ  PLLKSLKLN+QF R  E   D+ A+AIAE MP L+HL
Subjt:  TDELLQYITQSSNQLKSLRIAVCYDISDEGLIEAVTKLPLLECLEIFICSFEVETLKTVGQRCPLLKSLKLNQQFCRGREMVSDEEAIAIAETMPKLQHL

Query:  QIFGNGLTNKGLLAILDGCPDLESLDLRQCLNLNLAGQLGQKCAEKIKILHLPHDPTDGYEFTTEII---NDYDSEDY----ASSDYNTGYVHDHYYGFS
        QIFGN LTN+GL AILDGCPDLESLDLRQC NLNLAGQLG KC+EKIK L LPHDPTD YEF+TEI+   +DY+ EDY      SD +     D YY FS
Subjt:  QIFGNGLTNKGLLAILDGCPDLESLDLRQCLNLNLAGQLGQKCAEKIKILHLPHDPTDGYEFTTEII---NDYDSEDY----ASSDYNTGYVHDHYYGFS

Query:  EDSDFFDYDDFTVEE
          SDF DY DF   E
Subjt:  EDSDFFDYDDFTVEE

XP_023543623.1 F-box protein SKIP19-like [Cucurbita pepo subsp. pepo]6.5e-10468.39Show/hide
Query:  MESNSVIQS-EAEVRNWLELPAEVMSMIFLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGDLHDMDHDLEIMCRHAVDRSCGQLVDINIEYFG
        MESNS   S   E RNWLELPA+V SMI LKLG ++ILT+AQ+VCSSWRKIC+DPLMWR +DM   GD  DMD+DLE MCR AVDRSCGQL+ INIE+FG
Subjt:  MESNSVIQS-EAEVRNWLELPAEVMSMIFLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGDLHDMDHDLEIMCRHAVDRSCGQLVDINIEYFG

Query:  TDELLQYITQSSNQLKSLRIAVCYDISDEGLIEAVTKLPLLECLEIFICSFEVETLKTVGQRCPLLKSLKLNQQFCRGREMVSDEEAIAIAETMPKLQHL
        TD+LL YITQSSNQL+ LR+  C  ISDEGLI+AV+KLPLLE LEI   SF+VETL+T+GQ  PLLKSLKLN+QF R  E   D+ A+AIAE MP L+HL
Subjt:  TDELLQYITQSSNQLKSLRIAVCYDISDEGLIEAVTKLPLLECLEIFICSFEVETLKTVGQRCPLLKSLKLNQQFCRGREMVSDEEAIAIAETMPKLQHL

Query:  QIFGNGLTNKGLLAILDGCPDLESLDLRQCLNLNLAGQLGQKCAEKIKILHLPHDPTDGYEFTTEII---NDYDSEDY----ASSDYNTGYVHDHYYGFS
        QIFGN LTN+GL AILDGCPDLESLDLRQC NLNLAGQLG KC+EKIK L LPHDPTD YEF+TEI+   +DY+ EDY      SD +     D YY FS
Subjt:  QIFGNGLTNKGLLAILDGCPDLESLDLRQCLNLNLAGQLGQKCAEKIKILHLPHDPTDGYEFTTEII---NDYDSEDY----ASSDYNTGYVHDHYYGFS

Query:  EDSDFFDYDD
          SDF DY D
Subjt:  EDSDFFDYDD

XP_038883506.1 F-box protein SKIP19-like [Benincasa hispida]1.3e-12374.14Show/hide
Query:  MESNSVIQSEAEVRNWLELPAEVMSMIFLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGDLHDMDHDLEIMCRHAVDRSCGQLVDINIEYFGT
        MESNSVIQSEAE RNWL+LPAEVMSMI LKLGAIEILTSAQNVCSSWRKICKDPLMWR IDM N G+L+DMDHDLEIMCRHAVDRSCGQL+DINIEYFGT
Subjt:  MESNSVIQSEAEVRNWLELPAEVMSMIFLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGDLHDMDHDLEIMCRHAVDRSCGQLVDINIEYFGT

Query:  DELLQYITQSSNQLKSLRIAVCYDISDEGLIEAVTKLPLLECLEIFICSFEVETLKTVGQRCPLLKSLKLNQQFCRGREMVSDEEAIAIAETMPKLQHLQ
        DELLQYITQSSNQL+ LR+A CYDISDEGL EA+++LPLLE LEIFI SF+VETLKTVG+ CPLLK LKL ++     +MV+++EA+AIAETMPKL+HLQ
Subjt:  DELLQYITQSSNQLKSLRIAVCYDISDEGLIEAVTKLPLLECLEIFICSFEVETLKTVGQRCPLLKSLKLNQQFCRGREMVSDEEAIAIAETMPKLQHLQ

Query:  IFGNGLTNKGLLAILDGCPDLESLDLRQCLNLNLAGQLGQKCAEKIKILHLPHDP-TDGYEFTTEIIN--DYDSEDYASSDYNTGYVHDHYYGFSEDSDF
        I GNGLTN GL AILDGCPDLESLDLRQC +LNL GQLG++CAE+ K+LHLPHD  T+G+E T + I+  D+DSED  S D+ +G  HD YY F  DSDF
Subjt:  IFGNGLTNKGLLAILDGCPDLESLDLRQCLNLNLAGQLGQKCAEKIKILHLPHDP-TDGYEFTTEIIN--DYDSEDYASSDYNTGYVHDHYYGFSEDSDF

Query:  FDYDDFTVEESDFFDYDDFTR
         DYDD T    ++ DY+DFT+
Subjt:  FDYDDFTVEESDFFDYDDFTR

XP_038883784.1 F-box protein SKIP19-like [Benincasa hispida]1.7e-10468.28Show/hide
Query:  MESNSVIQS-EAEVRNWLELPAEVMSMIFLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGDLHDMDHDLEIMCRHAVDRSCGQLVDINIEYFG
        MESNS   S E E RNWLELPA+VMSMI  KLG ++ILT+AQ+VCSSWRKIC+DPLMWR IDM   GD  DMD+DLE +CR AV RSCGQLVDINIE+FG
Subjt:  MESNSVIQS-EAEVRNWLELPAEVMSMIFLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGDLHDMDHDLEIMCRHAVDRSCGQLVDINIEYFG

Query:  TDELLQYITQSSNQLKSLRIAVCYDISDEGLIEAVTKLPLLECLEIFICSFEVETLKTVGQRCPLLKSLKLNQQFCRGREMVSDEEAIAIAETMPKLQHL
        TD+LL YITQSSNQL  LR+  C  ISDEGLIEAV++LPLLE LE+  CSF+VETL T+GQ CP LKSLKLN+QF R  E   D+ A+AIAE MP L+HL
Subjt:  TDELLQYITQSSNQLKSLRIAVCYDISDEGLIEAVTKLPLLECLEIFICSFEVETLKTVGQRCPLLKSLKLNQQFCRGREMVSDEEAIAIAETMPKLQHL

Query:  QIFGNGLTNKGLLAILDGCPDLESLDLRQCLNLNLAGQLGQKCAEKIKILHLPHDPTDGYEFTTEII---NDYDSE---DYASSDYNTGYVHDHYYGFSE
        QIFGN LTN GL AILDGCP LESLDLRQC NLNLAGQLG KC+ KIK L +PHDPTD YEF+TEII   +DYD +    +  SD N     D YY FS 
Subjt:  QIFGNGLTNKGLLAILDGCPDLESLDLRQCLNLNLAGQLGQKCAEKIKILHLPHDPTDGYEFTTEII---NDYDSE---DYASSDYNTGYVHDHYYGFSE

Query:  DSDFFDYDD
         SDF DY D
Subjt:  DSDFFDYDD

TrEMBL top hitse value%identityAlignment
A0A5A7UDI0 F-box protein SKIP19-like isoform X12.3e-9966.02Show/hide
Query:  MESNSVIQS-EAEVRNWLELPAEVMSMIFLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGDLHDMDHDLEIMCRHAVDRSCGQLVDINIEYFG
        MESNS   S E E RNWLELP +V SMI  KLG +EILT AQ VCSSWRKIC+DPLMWR IDM    D  DMD+DLE MCR AV RSCG+L+ INIE+FG
Subjt:  MESNSVIQS-EAEVRNWLELPAEVMSMIFLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGDLHDMDHDLEIMCRHAVDRSCGQLVDINIEYFG

Query:  TDELLQYITQSSNQLKSLRIAVCYDISDEGLIEAVTKLPLLECLEIFICSFEVETLKTVGQRCPLLKSLKLNQQFCRGREMVSDEEAIAIAETMPKLQHL
        TD+LL+YITQS NQL  LR+  C  ISDEGLIEAV+KLPLLE LE+  CSF VETL T+GQ CP LKSLKLN+QF R  E   D+ A+AIA+ MP L+HL
Subjt:  TDELLQYITQSSNQLKSLRIAVCYDISDEGLIEAVTKLPLLECLEIFICSFEVETLKTVGQRCPLLKSLKLNQQFCRGREMVSDEEAIAIAETMPKLQHL

Query:  QIFGNGLTNKGLLAILDGCPDLESLDLRQCLNLNLAGQLGQKCAEKIKILHLPHDPTDGYEFTTEIINDYDSED------YASSDYNTGYVHDHYYGFSE
         IFGN LTN+GL AIL GC  LESLDLRQC NLNLAGQLG KC+EKIK L LPHDPTD  EFTTEII+D D+ D      +  SD +     D YY FS 
Subjt:  QIFGNGLTNKGLLAILDGCPDLESLDLRQCLNLNLAGQLGQKCAEKIKILHLPHDPTDGYEFTTEIINDYDSED------YASSDYNTGYVHDHYYGFSE

Query:  DSDFFDYDD
         SDF DY D
Subjt:  DSDFFDYDD

A0A6J1CXS5 F-box protein SKIP19-like7.3e-10164.19Show/hide
Query:  MESNSVIQSEAEVRNWLELPAEVMSMIFLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGDLHDMDHDLEIMCRHAVDRSCGQLVDINIEYFGT
        MESN +  S  E RNWLELPA++ SMI LKLGAIEIL+SAQ+VCS WRKICKDPLMWR +DMHN+G+  DMD+DLE MC  AVDRSCG+L+DINI+YFGT
Subjt:  MESNSVIQSEAEVRNWLELPAEVMSMIFLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGDLHDMDHDLEIMCRHAVDRSCGQLVDINIEYFGT

Query:  DELLQYITQSSNQLKSLRIAVCYDISDEGLIEAVTKLPLLECLEIFICSFEVETLKTVGQRCPLLKSLKLNQQFCRGREMVSDEEAIAIAETMPKLQHLQ
        +ELLQYITQSSNQL+ LRI  C+ I+D GL EAV+KLPLLE LEI +CSF  +TL+TVG+ C LLKSLKL+ Q CR   +  D +AIAIAE MP L++LQ
Subjt:  DELLQYITQSSNQLKSLRIAVCYDISDEGLIEAVTKLPLLECLEIFICSFEVETLKTVGQRCPLLKSLKLNQQFCRGREMVSDEEAIAIAETMPKLQHLQ

Query:  IFGNGLTNKGLLAILDGCPDLESLDLRQCLNLNLAGQLGQKCAEKIKILHLPHDPTDGYEFTTEIINDYDSEDYASSDYNTGY-------VHDHYYGFSE
        IFG+ LT++GL AILDGCPDLESLDLRQC NL+L GQLG +CAE+IK L LPHDPTD YEF  E  + +  +D    DY +G+         D YY +S 
Subjt:  IFGNGLTNKGLLAILDGCPDLESLDLRQCLNLNLAGQLGQKCAEKIKILHLPHDPTDGYEFTTEIINDYDSEDYASSDYNTGY-------VHDHYYGFSE

Query:  DSDFFDYDDF
         S+F DY DF
Subjt:  DSDFFDYDDF

A0A6J1ECV6 F-box protein SKIP19-like isoform X14.1e-10468.39Show/hide
Query:  MESNSVIQS-EAEVRNWLELPAEVMSMIFLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGDLHDMDHDLEIMCRHAVDRSCGQLVDINIEYFG
        MESNS   S   E RNWLELPA+V SMI LKLG ++ILT+AQ+VCSSWRKIC+DPLMWR +DM   GD  DMD+DLE MCR AVDRSCGQL+ I IE+FG
Subjt:  MESNSVIQS-EAEVRNWLELPAEVMSMIFLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGDLHDMDHDLEIMCRHAVDRSCGQLVDINIEYFG

Query:  TDELLQYITQSSNQLKSLRIAVCYDISDEGLIEAVTKLPLLECLEIFICSFEVETLKTVGQRCPLLKSLKLNQQFCRGREMVSDEEAIAIAETMPKLQHL
        TD+LLQYITQSSNQL+ LR+  C  ISDEGLI+AV+KLPLLE LEI   SF+VETL+T+GQ  PLLKSLKLN+QF R  E   D+ A+AIAE MP L+HL
Subjt:  TDELLQYITQSSNQLKSLRIAVCYDISDEGLIEAVTKLPLLECLEIFICSFEVETLKTVGQRCPLLKSLKLNQQFCRGREMVSDEEAIAIAETMPKLQHL

Query:  QIFGNGLTNKGLLAILDGCPDLESLDLRQCLNLNLAGQLGQKCAEKIKILHLPHDPTDGYEFTTEII---NDYDSEDY----ASSDYNTGYVHDHYYGFS
        QIFGN LTN+GL AILDGCPDLESLDLRQC NLNLAGQLG KC+EKIK L LPHDPTD YEF+TEI+   +DY+ EDY      SD +     D YY FS
Subjt:  QIFGNGLTNKGLLAILDGCPDLESLDLRQCLNLNLAGQLGQKCAEKIKILHLPHDPTDGYEFTTEII---NDYDSEDY----ASSDYNTGYVHDHYYGFS

Query:  EDSDFFDYDD
          SDF DY D
Subjt:  EDSDFFDYDD

A0A6J1EGI8 F-box protein SKIP19-like isoform X27.0e-10468.51Show/hide
Query:  MESNSVIQS-EAEVRNWLELPAEVMSMIFLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGDLHDMDHDLEIMCRHAVDRSCGQLVDINIEYFG
        MESNS   S   E RNWLELPA+V SMI LKLG ++ILT+AQ+VCSSWRKIC+DPLMWR +DM   GD  DMD+DLE MCR AVDRSCGQL+ I IE+FG
Subjt:  MESNSVIQS-EAEVRNWLELPAEVMSMIFLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGDLHDMDHDLEIMCRHAVDRSCGQLVDINIEYFG

Query:  TDELLQYITQSSNQLKSLRIAVCYDISDEGLIEAVTKLPLLECLEIFICSFEVETLKTVGQRCPLLKSLKLNQQFCRGREMVSDEEAIAIAETMPKLQHL
        TD+LLQYITQSSNQL+ LR+  C  ISDEGLI+AV+KLPLLE LEI   SF+VETL+T+GQ  PLLKSLKLN+QF R  E   D+ A+AIAE MP L+HL
Subjt:  TDELLQYITQSSNQLKSLRIAVCYDISDEGLIEAVTKLPLLECLEIFICSFEVETLKTVGQRCPLLKSLKLNQQFCRGREMVSDEEAIAIAETMPKLQHL

Query:  QIFGNGLTNKGLLAILDGCPDLESLDLRQCLNLNLAGQLGQKCAEKIKILHLPHDPTDGYEFTTEII---NDYDSEDY----ASSDYNTGYVHDHYYGFS
        QIFGN LTN+GL AILDGCPDLESLDLRQC NLNLAGQLG KC+EKIK L LPHDPTD YEF+TEI+   +DY+ EDY      SD +     D YY FS
Subjt:  QIFGNGLTNKGLLAILDGCPDLESLDLRQCLNLNLAGQLGQKCAEKIKILHLPHDPTDGYEFTTEII---NDYDSEDY----ASSDYNTGYVHDHYYGFS

Query:  EDSDFFDY
          SDF DY
Subjt:  EDSDFFDY

A0A6J1ILH5 F-box protein SKIP19-like1.6e-10368.18Show/hide
Query:  MESNSVIQS-EAEVRNWLELPAEVMSMIFLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGDLHDMDHDLEIMCRHAVDRSCGQLVDINIEYFG
        MESNS   S   E RNWLELPA+V SMI LKLG ++ILT+AQ+VCSSWRKIC+DPLMWR +DM   GD  DMD+DLE MCR AVDRSCGQL+ INIE+FG
Subjt:  MESNSVIQS-EAEVRNWLELPAEVMSMIFLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGDLHDMDHDLEIMCRHAVDRSCGQLVDINIEYFG

Query:  TDELLQYITQSSNQLKSLRIAVCYDISDEGLIEAVTKLPLLECLEIFICSFEVETLKTVGQRCPLLKSLKLNQQFCRGREMVSDEEAIAIAETMPKLQHL
        TD+LLQYITQSSNQL+ LR+  C  ISDEG I+AV+KLPLLE LEI   SF+VETL+T+G   PLLKSLKLN+QF R  E   D+ A+AIAE MP L+HL
Subjt:  TDELLQYITQSSNQLKSLRIAVCYDISDEGLIEAVTKLPLLECLEIFICSFEVETLKTVGQRCPLLKSLKLNQQFCRGREMVSDEEAIAIAETMPKLQHL

Query:  QIFGNGLTNKGLLAILDGCPDLESLDLRQCLNLNLAGQLGQKCAEKIKILHLPHDPTDGYEFTTEII---NDYDSEDY----ASSDYNTGYVHDHYYGFS
        QIFGN LTN+GL AILDGCPDLESLDLRQC NLNLAGQLG KC+EKIK L LPHDPTD YEF+TEI+   +DY+ EDY      SD +     D YY FS
Subjt:  QIFGNGLTNKGLLAILDGCPDLESLDLRQCLNLNLAGQLGQKCAEKIKILHLPHDPTDGYEFTTEII---NDYDSEDY----ASSDYNTGYVHDHYYGFS

Query:  EDSDFFDY
          SDF DY
Subjt:  EDSDFFDY

SwissProt top hitse value%identityAlignment
Q9M0U6 Putative F-box/LRR-repeat protein 227.6e-6346.1Show/hide
Query:  VIQSEAEVRNWLELPAEVMSMIFLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGDLHDMDHDLEIMCRHAVDRSCGQLVDINIEY--FGTDEL
        V++ E +  NW ELP +++S I L+L  +EIL +A+ VC SWR++ KDPL+WR IDM NL  L+ + + +E  CRH VD S G L++ NI+   F T  L
Subjt:  VIQSEAEVRNWLELPAEVMSMIFLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGDLHDMDHDLEIMCRHAVDRSCGQLVDINIEY--FGTDEL

Query:  LQYITQSSNQLKSLRIAVCYDISDEGLIEAVTKLPLLECLEIFICSFEVETLKTVGQRCPLLKSLKLNQQFCRGREMVSDEEAIAIAETMPKLQHLQIFG
        L Y+ + S+ L+ LR+     I+  G+ EA+ KLPLLE LE+  CS E E  KT+GQ CP LK+LKL   +    E  SD +A+AIA+TMP L HLQ+  
Subjt:  LQYITQSSNQLKSLRIAVCYDISDEGLIEAVTKLPLLECLEIFICSFEVETLKTVGQRCPLLKSLKLNQQFCRGREMVSDEEAIAIAETMPKLQHLQIFG

Query:  NGLTNKGLLAILDGCPDLESLDLRQCLNLNLAGQLGQKCAEKIKILHLPHDPTDGYEFTTEIINDYDSEDYASSDYNTGY-VHDHYYGFSEDSDF
        NGLTN GL AILDGCP LE LDLRQC N+NL G L ++C E+IK    P+D  D Y +     N    ++    + N  Y   D  YG+   +DF
Subjt:  NGLTNKGLLAILDGCPDLESLDLRQCLNLNLAGQLGQKCAEKIKILHLPHDPTDGYEFTTEIINDYDSEDYASSDYNTGY-VHDHYYGFSEDSDF

Q9M0U7 Putative F-box protein At4g054751.9e-6146.47Show/hide
Query:  QSEAEVRNWLELPAEVMSMIFLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGDLHDMDHDLEIMCRHAVDRSCGQLVDINIEYFGTDELLQYI
        + + E  NW++LP E+ + I L+L   +IL +A+ +C +WR+ICKDP MWR I   NL D    + D E MCRH VD S G L++INIE+F +D LL YI
Subjt:  QSEAEVRNWLELPAEVMSMIFLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGDLHDMDHDLEIMCRHAVDRSCGQLVDINIEYFGTDELLQYI

Query:  TQSSNQLKSLRIAVCYDISDEGLIEAVTKLPLLECLEIFICSFEVETLKTVGQRCPLLKSLKLNQQFCRGREMVS----------DEEAIAIAETMPKLQ
           S  LKSL I++   ++++G++  + KLPLLE L IF  S +++ LK +G  CP LK+LKLN         +S          D++A+AIAE+MPKL+
Subjt:  TQSSNQLKSLRIAVCYDISDEGLIEAVTKLPLLECLEIFICSFEVETLKTVGQRCPLLKSLKLNQQFCRGREMVS----------DEEAIAIAETMPKLQ

Query:  HLQIFGNGLTNKGLLAILDGCPDLES-LDLRQCLNLNLAGQLGQKCAEKIKILHLPHDPTDGYEFTTEI
        HLQ+ GNGLTN GL AILDGCP LE  LD+R+C N+NL G L ++C ++IK L  PHD T  Y ++  +
Subjt:  HLQIFGNGLTNKGLLAILDGCPDLES-LDLRQCLNLNLAGQLGQKCAEKIKILHLPHDPTDGYEFTTEI

Q9M0U9 F-box protein SKIP196.8e-8054.61Show/hide
Query:  EVRNWLELPAEVMSMIFLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGDLHDMDHDLEIMCRHAVDRSCGQLVDINIEYFGTDELLQYITQSS
        E  NW ELP E+ S I  +LGAIEIL +AQ VC SWR++CKDP MWR IDMHNLGDL DMD++LEIMCRHAVDRS G LVDI I YFGT +LL YI   S
Subjt:  EVRNWLELPAEVMSMIFLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGDLHDMDHDLEIMCRHAVDRSCGQLVDINIEYFGTDELLQYITQSS

Query:  NQLKSLRIAVCYDISDEGLIEAVTKLPLLECLEIFICSFEVETLKTVGQRCPLLKSLKLNQQFCRGREMVSDEEAIAIAETMPKLQHLQIFGNGLTNKGL
        + L+SLR+  C  I+D+G +EAV KLPL E LE+  CSF VE+L+ VGQ C  +K+LKLN+      +  +D++A+AIAETMPKL+HLQ+ GNGL++ GL
Subjt:  NQLKSLRIAVCYDISDEGLIEAVTKLPLLECLEIFICSFEVETLKTVGQRCPLLKSLKLNQQFCRGREMVSDEEAIAIAETMPKLQHLQIFGNGLTNKGL

Query:  LAILDGCPDLESLDLRQCLNLNLAGQLGQKCAEKIKILHLPHDPTDGYEFTTEIINDYDSEDYASSDYNTG-YVHDHYYGFSEDSDFFDYDDF
         AILD C +LE LDLR+C N+NL G L ++C E +K++  P+D     +  +    D D  D++  D  +G    + YY FS  SDF DYD F
Subjt:  LAILDGCPDLESLDLRQCLNLNLAGQLGQKCAEKIKILHLPHDPTDGYEFTTEIINDYDSEDYASSDYNTG-YVHDHYYGFSEDSDFFDYDDF

Q9S9V8 Putative F-box/LRR-repeat protein 91.5e-5549.35Show/hide
Query:  EVRNWLELPAEVMSMIFLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDM---HNLGDLHDMDHDLEIMCRHAVDRSCGQLVDINIEYFGTDELLQYIT
        E RNW ELP E+ S I L+LGAIEIL +AQ VC SWR++C+DP MWR ID+    NL +  ++ + +E +C  AVD S G L++INI+Y      L YI 
Subjt:  EVRNWLELPAEVMSMIFLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDM---HNLGDLHDMDHDLEIMCRHAVDRSCGQLVDINIEYFGTDELLQYIT

Query:  QSSNQLKSLRIAVCYDISDEGLIEAVTKLPLLECLEI-FICSFEVETLKTVGQRCPLLKSLKLNQQFCRGREMVSDEEAIAIAETMPKLQHLQIFGNGLT
          S+ L+ L +  C  +   G++EA  KLPLLE L+I +  S   + LK VGQ CP L++LKLN   C G     D+ A+AIAETMP L+HLQ+F NGL+
Subjt:  QSSNQLKSLRIAVCYDISDEGLIEAVTKLPLLECLEI-FICSFEVETLKTVGQRCPLLKSLKLNQQFCRGREMVSDEEAIAIAETMPKLQHLQIFGNGLT

Query:  NKGLLAILDGCPDLESLDLRQCLNLNLAGQL
          GL AIL+GCP L++L L QCLN+N+ G +
Subjt:  NKGLLAILDGCPDLESLDLRQCLNLNLAGQL

Q9S9V9 Putative F-box/LRR-repeat protein 234.3e-7453.52Show/hide
Query:  IQSEAEVRNWLELPAEVMSMIFLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGDLHDMDHDLEIMCRHAVDRSCGQLVDINIEYFGTDELLQY
        +  + ++RNW ELP+++ S I L+LGAIEIL +AQ VC  W ++CKDP MWR ID+ N  D     +DLE MCRHAVDRS G L++I I Y+GT++L+ Y
Subjt:  IQSEAEVRNWLELPAEVMSMIFLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGDLHDMDHDLEIMCRHAVDRSCGQLVDINIEYFGTDELLQY

Query:  ITQSSNQLKSLRIAVCYDISDEGLIEAVTKLPLLECLEIFICSFEVETLKTVGQRCPLLKSLKLNQQFCRGREMV-----SDEEAIAIAETMPKLQHLQI
        I   S+ LKSL +  C+ I+DEG+ +AV+K+PLLE LE+  C F  E+L+ +G+ CP LK+LKLN    R  E++      D+ A AIAE+MP+L+HLQ+
Subjt:  ITQSSNQLKSLRIAVCYDISDEGLIEAVTKLPLLECLEIFICSFEVETLKTVGQRCPLLKSLKLNQQFCRGREMV-----SDEEAIAIAETMPKLQHLQI

Query:  FGNGLTNKGLLAILDGCPDLESLDLRQCLNLNLAGQLGQKCAEKIKILHLPHDPTD
         GNGLTNKGL AILDGCP LE LDLRQC N+NL G L ++C E+IK L  P+D  D
Subjt:  FGNGLTNKGLLAILDGCPDLESLDLRQCLNLNLAGQLGQKCAEKIKILHLPHDPTD

Arabidopsis top hitse value%identityAlignment
AT4G05460.1 RNI-like superfamily protein4.8e-8154.61Show/hide
Query:  EVRNWLELPAEVMSMIFLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGDLHDMDHDLEIMCRHAVDRSCGQLVDINIEYFGTDELLQYITQSS
        E  NW ELP E+ S I  +LGAIEIL +AQ VC SWR++CKDP MWR IDMHNLGDL DMD++LEIMCRHAVDRS G LVDI I YFGT +LL YI   S
Subjt:  EVRNWLELPAEVMSMIFLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGDLHDMDHDLEIMCRHAVDRSCGQLVDINIEYFGTDELLQYITQSS

Query:  NQLKSLRIAVCYDISDEGLIEAVTKLPLLECLEIFICSFEVETLKTVGQRCPLLKSLKLNQQFCRGREMVSDEEAIAIAETMPKLQHLQIFGNGLTNKGL
        + L+SLR+  C  I+D+G +EAV KLPL E LE+  CSF VE+L+ VGQ C  +K+LKLN+      +  +D++A+AIAETMPKL+HLQ+ GNGL++ GL
Subjt:  NQLKSLRIAVCYDISDEGLIEAVTKLPLLECLEIFICSFEVETLKTVGQRCPLLKSLKLNQQFCRGREMVSDEEAIAIAETMPKLQHLQIFGNGLTNKGL

Query:  LAILDGCPDLESLDLRQCLNLNLAGQLGQKCAEKIKILHLPHDPTDGYEFTTEIINDYDSEDYASSDYNTG-YVHDHYYGFSEDSDFFDYDDF
         AILD C +LE LDLR+C N+NL G L ++C E +K++  P+D     +  +    D D  D++  D  +G    + YY FS  SDF DYD F
Subjt:  LAILDGCPDLESLDLRQCLNLNLAGQLGQKCAEKIKILHLPHDPTDGYEFTTEIINDYDSEDYASSDYNTG-YVHDHYYGFSEDSDFFDYDDF

AT4G05470.1 RNI-like superfamily protein7.8e-5544.24Show/hide
Query:  EVRNWLELPAEVMSMIFLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGDLHDMDHDLEIMCRHAVDRSCGQLVDINI-EYFGTDELLQYITQS
        E RNW++LP E+ + I L+L   +IL +AQ VC  WR+ICKDP MWR I   N  D    + D   MCRH VD S G L++IN+ E+F +D LL YIT  
Subjt:  EVRNWLELPAEVMSMIFLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGDLHDMDHDLEIMCRHAVDRSCGQLVDINI-EYFGTDELLQYITQS

Query:  SNQLKSLRIAVCYD-ISDEGLIEAVTKLPLLECLEIFICSFEVETLKTVGQRCPLLKSLKLNQQFCRGR-----------------EMVSDEEAIAIAET
           L+SL + +C+  ++  G++ A+ K+PLLE LE+     +++ LK +G  CP LK+LKLN     GR                  +  D++A+AIAE+
Subjt:  SNQLKSLRIAVCYD-ISDEGLIEAVTKLPLLECLEIFICSFEVETLKTVGQRCPLLKSLKLNQQFCRGR-----------------EMVSDEEAIAIAET

Query:  MPKLQHLQIFGNGLTNKGLLAILDGCPDLESLDLRQCLNLNLAGQLGQKCAEKIKILHLPHDPTDGYEF
        MPKL HLQ+  N LTN GL AILDGCP LE LD+R+C  ++L G L ++C E IK L  P D T  Y +
Subjt:  MPKLQHLQIFGNGLTNKGLLAILDGCPDLESLDLRQCLNLNLAGQLGQKCAEKIKILHLPHDPTDGYEF

AT4G05475.1 RNI-like superfamily protein1.3e-6246.47Show/hide
Query:  QSEAEVRNWLELPAEVMSMIFLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGDLHDMDHDLEIMCRHAVDRSCGQLVDINIEYFGTDELLQYI
        + + E  NW++LP E+ + I L+L   +IL +A+ +C +WR+ICKDP MWR I   NL D    + D E MCRH VD S G L++INIE+F +D LL YI
Subjt:  QSEAEVRNWLELPAEVMSMIFLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGDLHDMDHDLEIMCRHAVDRSCGQLVDINIEYFGTDELLQYI

Query:  TQSSNQLKSLRIAVCYDISDEGLIEAVTKLPLLECLEIFICSFEVETLKTVGQRCPLLKSLKLNQQFCRGREMVS----------DEEAIAIAETMPKLQ
           S  LKSL I++   ++++G++  + KLPLLE L IF  S +++ LK +G  CP LK+LKLN         +S          D++A+AIAE+MPKL+
Subjt:  TQSSNQLKSLRIAVCYDISDEGLIEAVTKLPLLECLEIFICSFEVETLKTVGQRCPLLKSLKLNQQFCRGREMVS----------DEEAIAIAETMPKLQ

Query:  HLQIFGNGLTNKGLLAILDGCPDLES-LDLRQCLNLNLAGQLGQKCAEKIKILHLPHDPTDGYEFTTEI
        HLQ+ GNGLTN GL AILDGCP LE  LD+R+C N+NL G L ++C ++IK L  PHD T  Y ++  +
Subjt:  HLQIFGNGLTNKGLLAILDGCPDLES-LDLRQCLNLNLAGQLGQKCAEKIKILHLPHDPTDGYEFTTEI

AT4G05490.1 RNI-like superfamily protein5.4e-6446.1Show/hide
Query:  VIQSEAEVRNWLELPAEVMSMIFLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGDLHDMDHDLEIMCRHAVDRSCGQLVDINIEY--FGTDEL
        V++ E +  NW ELP +++S I L+L  +EIL +A+ VC SWR++ KDPL+WR IDM NL  L+ + + +E  CRH VD S G L++ NI+   F T  L
Subjt:  VIQSEAEVRNWLELPAEVMSMIFLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGDLHDMDHDLEIMCRHAVDRSCGQLVDINIEY--FGTDEL

Query:  LQYITQSSNQLKSLRIAVCYDISDEGLIEAVTKLPLLECLEIFICSFEVETLKTVGQRCPLLKSLKLNQQFCRGREMVSDEEAIAIAETMPKLQHLQIFG
        L Y+ + S+ L+ LR+     I+  G+ EA+ KLPLLE LE+  CS E E  KT+GQ CP LK+LKL   +    E  SD +A+AIA+TMP L HLQ+  
Subjt:  LQYITQSSNQLKSLRIAVCYDISDEGLIEAVTKLPLLECLEIFICSFEVETLKTVGQRCPLLKSLKLNQQFCRGREMVSDEEAIAIAETMPKLQHLQIFG

Query:  NGLTNKGLLAILDGCPDLESLDLRQCLNLNLAGQLGQKCAEKIKILHLPHDPTDGYEFTTEIINDYDSEDYASSDYNTGY-VHDHYYGFSEDSDF
        NGLTN GL AILDGCP LE LDLRQC N+NL G L ++C E+IK    P+D  D Y +     N    ++    + N  Y   D  YG+   +DF
Subjt:  NGLTNKGLLAILDGCPDLESLDLRQCLNLNLAGQLGQKCAEKIKILHLPHDPTDGYEFTTEIINDYDSEDYASSDYNTGY-VHDHYYGFSEDSDF

AT4G05497.1 RNI-like superfamily protein1.1e-5649.35Show/hide
Query:  EVRNWLELPAEVMSMIFLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDM---HNLGDLHDMDHDLEIMCRHAVDRSCGQLVDINIEYFGTDELLQYIT
        E RNW ELP E+ S I L+LGAIEIL +AQ VC SWR++C+DP MWR ID+    NL +  ++ + +E +C  AVD S G L++INI+Y      L YI 
Subjt:  EVRNWLELPAEVMSMIFLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDM---HNLGDLHDMDHDLEIMCRHAVDRSCGQLVDINIEYFGTDELLQYIT

Query:  QSSNQLKSLRIAVCYDISDEGLIEAVTKLPLLECLEI-FICSFEVETLKTVGQRCPLLKSLKLNQQFCRGREMVSDEEAIAIAETMPKLQHLQIFGNGLT
          S+ L+ L +  C  +   G++EA  KLPLLE L+I +  S   + LK VGQ CP L++LKLN   C G     D+ A+AIAETMP L+HLQ+F NGL+
Subjt:  QSSNQLKSLRIAVCYDISDEGLIEAVTKLPLLECLEI-FICSFEVETLKTVGQRCPLLKSLKLNQQFCRGREMVSDEEAIAIAETMPKLQHLQIFGNGLT

Query:  NKGLLAILDGCPDLESLDLRQCLNLNLAGQL
          GL AIL+GCP L++L L QCLN+N+ G +
Subjt:  NKGLLAILDGCPDLESLDLRQCLNLNLAGQL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCTAACTCTGTGATTCAGTCGGAAGCGGAAGTGAGGAACTGGCTTGAACTGCCTGCAGAAGTAATGTCTATGATTTTCCTGAAGCTAGGCGCCATTGAAATCCT
TACCAGCGCTCAAAATGTCTGCTCTTCGTGGCGTAAGATCTGCAAGGACCCTCTCATGTGGCGTGCCATCGATATGCACAATCTGGGCGATTTGCATGATATGGATCACG
ATTTGGAGATCATGTGCAGGCACGCTGTTGATCGTAGTTGTGGCCAACTGGTCGACATCAATATCGAGTACTTTGGCACCGACGAGTTGCTCCAATACATCACTCAGAGT
TCAAATCAACTCAAAAGTCTGCGGATTGCAGTTTGCTATGACATCTCAGATGAGGGATTGATCGAAGCAGTTACGAAACTTCCATTGTTGGAGTGCCTTGAAATATTTAT
ATGTTCATTCGAAGTGGAAACTTTGAAAACCGTTGGACAACGTTGCCCTCTTCTGAAATCGCTGAAACTGAACCAACAGTTTTGCAGAGGACGTGAGATGGTAAGCGACG
AGGAAGCCATTGCCATTGCTGAAACTATGCCTAAGTTACAACACCTTCAGATATTTGGCAATGGCCTAACTAACAAGGGCTTGCTGGCCATTCTCGATGGCTGTCCTGAT
TTAGAATCTCTCGACTTACGCCAGTGTTTGAACTTGAATTTGGCTGGACAGTTGGGACAAAAATGTGCTGAAAAGATCAAAATCTTGCATCTGCCTCATGATCCCACTGA
TGGCTATGAATTTACCACTGAAATTATCAATGATTATGATTCTGAAGATTACGCTTCTTCTGATTACAACACCGGTTACGTCCACGACCACTACTATGGTTTCTCAGAGG
ACAGTGATTTCTTTGACTATGATGACTTCACAGTAGAGGAGAGTGATTTCTTTGACTATGATGACTTCACAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTCTAACTCTGTGATTCAGTCGGAAGCGGAAGTGAGGAACTGGCTTGAACTGCCTGCAGAAGTAATGTCTATGATTTTCCTGAAGCTAGGCGCCATTGAAATCCT
TACCAGCGCTCAAAATGTCTGCTCTTCGTGGCGTAAGATCTGCAAGGACCCTCTCATGTGGCGTGCCATCGATATGCACAATCTGGGCGATTTGCATGATATGGATCACG
ATTTGGAGATCATGTGCAGGCACGCTGTTGATCGTAGTTGTGGCCAACTGGTCGACATCAATATCGAGTACTTTGGCACCGACGAGTTGCTCCAATACATCACTCAGAGT
TCAAATCAACTCAAAAGTCTGCGGATTGCAGTTTGCTATGACATCTCAGATGAGGGATTGATCGAAGCAGTTACGAAACTTCCATTGTTGGAGTGCCTTGAAATATTTAT
ATGTTCATTCGAAGTGGAAACTTTGAAAACCGTTGGACAACGTTGCCCTCTTCTGAAATCGCTGAAACTGAACCAACAGTTTTGCAGAGGACGTGAGATGGTAAGCGACG
AGGAAGCCATTGCCATTGCTGAAACTATGCCTAAGTTACAACACCTTCAGATATTTGGCAATGGCCTAACTAACAAGGGCTTGCTGGCCATTCTCGATGGCTGTCCTGAT
TTAGAATCTCTCGACTTACGCCAGTGTTTGAACTTGAATTTGGCTGGACAGTTGGGACAAAAATGTGCTGAAAAGATCAAAATCTTGCATCTGCCTCATGATCCCACTGA
TGGCTATGAATTTACCACTGAAATTATCAATGATTATGATTCTGAAGATTACGCTTCTTCTGATTACAACACCGGTTACGTCCACGACCACTACTATGGTTTCTCAGAGG
ACAGTGATTTCTTTGACTATGATGACTTCACAGTAGAGGAGAGTGATTTCTTTGACTATGATGACTTCACAAGATGA
Protein sequenceShow/hide protein sequence
MESNSVIQSEAEVRNWLELPAEVMSMIFLKLGAIEILTSAQNVCSSWRKICKDPLMWRAIDMHNLGDLHDMDHDLEIMCRHAVDRSCGQLVDINIEYFGTDELLQYITQS
SNQLKSLRIAVCYDISDEGLIEAVTKLPLLECLEIFICSFEVETLKTVGQRCPLLKSLKLNQQFCRGREMVSDEEAIAIAETMPKLQHLQIFGNGLTNKGLLAILDGCPD
LESLDLRQCLNLNLAGQLGQKCAEKIKILHLPHDPTDGYEFTTEIINDYDSEDYASSDYNTGYVHDHYYGFSEDSDFFDYDDFTVEESDFFDYDDFTR