CuGenDBv2

Gene ID	Spg011925
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	cyclic phosphodiesterase-like
Genome location	scaffold1:2185276..2187291
RNA-Seq Expression	Spg011925
Synteny	Spg011925
Gene Ontology terms	GO:0009187 - cyclic nucleotide metabolic process (biological process) GO:0004113 - 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity (molecular function)
InterPro domains	IPR009097 - Cyclic phosphodiesterase IPR012386 - 2',3'-cyclic-nucleotide 3'-phosphodiesterase

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6581386.1 Cyclic phosphodiesterase, partial [Cucurbita argyrosperma subsp. sororia]

5.1e-91

84.38

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Query:  MANPESAPLGPSEADKNVYSVWALPPEDVAARIKTFMNSLRSEFGGPQFEPHITVVGATRLTPEDALNKFRSACQGLKAYQATVDHVSIGTFFYQCVFFL
        MANPES P+ PSE +KNVYSVWALPPEDV ARI+T MNSLRSEFGGPQFEPHITVVGA RLT +DALNKFRSAC+GLKAYQATVD VS GTFFYQCVF L
Subjt:  MANPESAPLGPSEADKNVYSVWALPPEDVAARIKTFMNSLRSEFGGPQFEPHITVVGATRLTPEDALNKFRSACQGLKAYQATVDHVSIGTFFYQCVFFL

Query:  IHPTTEVMDTSSHCCGHFGFNDSTPYMPHLSLLYANISEEKKKKAKEIADTLDEAINGLKFPITRLALYKTDTGDETLESWEKIAEHNLPSS
        IHPTT+V++TSSHCCGHFG+N+STPYMPHLSLLYANIS+E+KK+AKE+A+ LDEAINGL FPITRLALYKTDTGDETL+SWEKIAE +LPSS
Subjt:  IHPTTEVMDTSSHCCGHFGFNDSTPYMPHLSLLYANISEEKKKKAKEIADTLDEAINGLKFPITRLALYKTDTGDETLESWEKIAEHNLPSS

KAG7034670.1 Cyclic phosphodiesterase, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.5e-90

84.38

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Query:  MANPESAPLGPSEADKNVYSVWALPPEDVAARIKTFMNSLRSEFGGPQFEPHITVVGATRLTPEDALNKFRSACQGLKAYQATVDHVSIGTFFYQCVFFL
        MANPES P+ PSE +KNVYSVWALPPEDV ARI+T MNSLRSEFGGPQFEPHITVVGA RLT +DALNKFRSAC+GLKAYQATVD VS GTFFYQCVF L
Subjt:  MANPESAPLGPSEADKNVYSVWALPPEDVAARIKTFMNSLRSEFGGPQFEPHITVVGATRLTPEDALNKFRSACQGLKAYQATVDHVSIGTFFYQCVFFL

Query:  IHPTTEVMDTSSHCCGHFGFNDSTPYMPHLSLLYANISEEKKKKAKEIADTLDEAINGLKFPITRLALYKTDTGDETLESWEKIAEHNLPSS
        IHPTT+V++TSSHCCGHFG N+STPYMPHLSLLYANIS+E+KK+AKE+A+ LDEAINGL FPITRLALYKTDTGDETL+SWEKIAE +LPSS
Subjt:  IHPTTEVMDTSSHCCGHFGFNDSTPYMPHLSLLYANISEEKKKKAKEIADTLDEAINGLKFPITRLALYKTDTGDETLESWEKIAEHNLPSS

XP_023522563.1 cyclic phosphodiesterase-like [Cucurbita pepo subsp. pepo]

4.3e-90

83.85

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Query:  MANPESAPLGPSEADKNVYSVWALPPEDVAARIKTFMNSLRSEFGGPQFEPHITVVGATRLTPEDALNKFRSACQGLKAYQATVDHVSIGTFFYQCVFFL
        MANPES P+ PSE +KNVYSVWALPPEDV ARI+T MNSLRSEFGGPQFEPHITVVGA RLT +DALNKFRSAC+GLKAYQATVD VS GTFFYQCVF L
Subjt:  MANPESAPLGPSEADKNVYSVWALPPEDVAARIKTFMNSLRSEFGGPQFEPHITVVGATRLTPEDALNKFRSACQGLKAYQATVDHVSIGTFFYQCVFFL

Query:  IHPTTEVMDTSSHCCGHFGFNDSTPYMPHLSLLYANISEEKKKKAKEIADTLDEAINGLKFPITRLALYKTDTGDETLESWEKIAEHNLPSS
        IHPT EV++TSSHCCGHFG+ +STPYMPHLSLLYANIS+E+KK+AKE+A+ LDEAINGL FPITRLALYKTDTGDETL+SWEKIAE +LPSS
Subjt:  IHPTTEVMDTSSHCCGHFGFNDSTPYMPHLSLLYANISEEKKKKAKEIADTLDEAINGLKFPITRLALYKTDTGDETLESWEKIAEHNLPSS

XP_023543945.1 cyclic phosphodiesterase-like isoform X2 [Cucurbita pepo subsp. pepo]

1.9e-90

83.85

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Query:  MANPESAPLGPSEADKNVYSVWALPPEDVAARIKTFMNSLRSEFGGPQFEPHITVVGATRLTPEDALNKFRSACQGLKAYQATVDHVSIGTFFYQCVFFL
        MANPES P+ PSE +KNVYSVWALPPEDV ARI+T MNSLRSEFGGPQFEPHITVVGA RLT +DALNKFRSAC+GLKAYQATVD VS GTFFYQCVF L
Subjt:  MANPESAPLGPSEADKNVYSVWALPPEDVAARIKTFMNSLRSEFGGPQFEPHITVVGATRLTPEDALNKFRSACQGLKAYQATVDHVSIGTFFYQCVFFL

Query:  IHPTTEVMDTSSHCCGHFGFNDSTPYMPHLSLLYANISEEKKKKAKEIADTLDEAINGLKFPITRLALYKTDTGDETLESWEKIAEHNLPSS
        IHPTT+V++TSSHCCGHFG+ +STPYMPHLSLLYANIS+E+KK+AKE+A+ LDEAINGL FPITRLALYKTDTGDETL+SWEKIAE +LPSS
Subjt:  IHPTTEVMDTSSHCCGHFGFNDSTPYMPHLSLLYANISEEKKKKAKEIADTLDEAINGLKFPITRLALYKTDTGDETLESWEKIAEHNLPSS

XP_038882567.1 cyclic phosphodiesterase-like [Benincasa hispida]

2.7e-92

85.94

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Query:  MANPESAPLGPSEADKNVYSVWALPPEDVAARIKTFMNSLRSEFGGPQFEPHITVVGATRLTPEDALNKFRSACQGLKAYQATVDHVSIGTFFYQCVFFL
        MANPESA + PSEA+ NVYSVWALPPEDV ARIK  MNSLRSEFGGPQFEPHITVVGA RLTP+DALNKFRSACQGLKAYQATVDHVS GTFFYQCVF L
Subjt:  MANPESAPLGPSEADKNVYSVWALPPEDVAARIKTFMNSLRSEFGGPQFEPHITVVGATRLTPEDALNKFRSACQGLKAYQATVDHVSIGTFFYQCVFFL

Query:  IHPTTEVMDTSSHCCGHFGFNDSTPYMPHLSLLYANISEEKKKKAKEIADTLDEAINGLKFPITRLALYKTDTGDETLESWEKIAEHNLPSS
        IH TTEV++TSSHCCGHFG+ +STPYMPH+SLLYANIS+EKKK+AK IAD LDEA+NGLKFPITRLALYKTDT DETL+SWEKIAEH LPSS
Subjt:  IHPTTEVMDTSSHCCGHFGFNDSTPYMPHLSLLYANISEEKKKKAKEIADTLDEAINGLKFPITRLALYKTDTGDETLESWEKIAEHNLPSS

TrEMBL top hits

e value

%identity

Alignment

A0A1S3AYZ1 cyclic phosphodiesterase-like

6.9e-86

80.73

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Query:  MANPESAPLGPSEADKNVYSVWALPPEDVAARIKTFMNSLRSEFGGPQFEPHITVVGATRLTPEDALNKFRSACQGLKAYQATVDHVSIGTFFYQCVFFL
        M NPESA +  SE + NVYSVWALPPEDV+ARI+  MNSLRSEFGGPQFEPHITVVGA RLT EDALNKF +ACQG+KAYQATVDHVS GTFFYQCVF L
Subjt:  MANPESAPLGPSEADKNVYSVWALPPEDVAARIKTFMNSLRSEFGGPQFEPHITVVGATRLTPEDALNKFRSACQGLKAYQATVDHVSIGTFFYQCVFFL

Query:  IHPTTEVMDTSSHCCGHFGFNDSTPYMPHLSLLYANISEEKKKKAKEIADTLDEAINGLKFPITRLALYKTDTGDETLESWEKIAEHNLPSS
        IHPTTEV++TSSH C HFGF +STPYMPH+SLLYA+IS+EKKK+AKEIAD LDEA+NGLKFPITRLAL+KTDT DETL+SWEKI EH+L SS
Subjt:  IHPTTEVMDTSSHCCGHFGFNDSTPYMPHLSLLYANISEEKKKKAKEIADTLDEAINGLKFPITRLALYKTDTGDETLESWEKIAEHNLPSS

A0A6J1EEQ8 cyclic phosphodiesterase-like

5.3e-86

80.21

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Query:  MANPESAPLGPSEADKNVYSVWALPPEDVAARIKTFMNSLRSEFGGPQFEPHITVVGATRLTPEDALNKFRSACQGLKAYQATVDHVSIGTFFYQCVFFL
        MANP SAP+ P E +  +YSVWALPPEDVA +I + M+SLRSEFGGP+FEPHITVVGA RLTP+DALNKFRSAC+G+KAYQATVD VSIGT FYQCVF L
Subjt:  MANPESAPLGPSEADKNVYSVWALPPEDVAARIKTFMNSLRSEFGGPQFEPHITVVGATRLTPEDALNKFRSACQGLKAYQATVDHVSIGTFFYQCVFFL

Query:  IHPTTEVMDTSSHCCGHFGFNDSTPYMPHLSLLYANISEEKKKKAKEIADTLDEAINGLKFPITRLALYKTDTGDETLESWEKIAEHNLPSS
        IHPTTEV+  SSHCCGHFG+N+STPYMPHLSLLYANIS+E KK+AKEIAD L+EA+NGLK P+TRLALYKTDTGDETL+SWEKIAEH+LPSS
Subjt:  IHPTTEVMDTSSHCCGHFGFNDSTPYMPHLSLLYANISEEKKKKAKEIADTLDEAINGLKFPITRLALYKTDTGDETLESWEKIAEHNLPSS

A0A6J1EGC1 cyclic phosphodiesterase-like

8.7e-89

83.33

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Query:  MANPESAPLGPSEADKNVYSVWALPPEDVAARIKTFMNSLRSEFGGPQFEPHITVVGATRLTPEDALNKFRSACQGLKAYQATVDHVSIGTFFYQCVFFL
        MANPES P+ PSE +KNVYSVWALPPEDV ARI+T MNSLRSEFGGPQFEPHITVVGA RLT +DALNKFRSAC+GLKAYQATVD VS GTFFYQCVF L
Subjt:  MANPESAPLGPSEADKNVYSVWALPPEDVAARIKTFMNSLRSEFGGPQFEPHITVVGATRLTPEDALNKFRSACQGLKAYQATVDHVSIGTFFYQCVFFL

Query:  IHPTTEVMDTSSHCCGHFGFNDSTPYMPHLSLLYANISEEKKKKAKEIADTLDEAINGLKFPITRLALYKTDTGDETLESWEKIAEHNLPSS
        IHPTT+V++TSSHCCGHFG+  +TPYMPHLSLLYANIS+E+KK+AKE+A+ LDEAINGL FPITRLALYKTDTGDETL+SWEKIAE +LPSS
Subjt:  IHPTTEVMDTSSHCCGHFGFNDSTPYMPHLSLLYANISEEKKKKAKEIADTLDEAINGLKFPITRLALYKTDTGDETLESWEKIAEHNLPSS

A0A6J1INY2 cyclic phosphodiesterase-like

1.3e-89

82.81

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Query:  MANPESAPLGPSEADKNVYSVWALPPEDVAARIKTFMNSLRSEFGGPQFEPHITVVGATRLTPEDALNKFRSACQGLKAYQATVDHVSIGTFFYQCVFFL
        MANPES  + PSE +KNVYSVWALPPEDV ARI+T MNSLRSEFGGPQFEPHITVVGA RLT +DALNKFRSAC+GLKAYQATVD VS GTFFYQCVF L
Subjt:  MANPESAPLGPSEADKNVYSVWALPPEDVAARIKTFMNSLRSEFGGPQFEPHITVVGATRLTPEDALNKFRSACQGLKAYQATVDHVSIGTFFYQCVFFL

Query:  IHPTTEVMDTSSHCCGHFGFNDSTPYMPHLSLLYANISEEKKKKAKEIADTLDEAINGLKFPITRLALYKTDTGDETLESWEKIAEHNLPSS
        IHPTT+V++TSSHCCGHFG+ +STPYMPHLSLLYANIS+E+KK+AKE+A+ LDEAINGL FP+TRLALYKTDTGDETL+SWEKIAE +LPSS
Subjt:  IHPTTEVMDTSSHCCGHFGFNDSTPYMPHLSLLYANISEEKKKKAKEIADTLDEAINGLKFPITRLALYKTDTGDETLESWEKIAEHNLPSS

A0A6J1KNB2 cyclic phosphodiesterase-like

2.6e-85

80.21

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Query:  MANPESAPLGPSEADKNVYSVWALPPEDVAARIKTFMNSLRSEFGGPQFEPHITVVGATRLTPEDALNKFRSACQGLKAYQATVDHVSIGTFFYQCVFFL
        MANP SAP+ P E +  +YSVWALPPEDVA +I + M+SLRSEFGGP+FEPHITVVGA RLTP+DALNKFRSAC+G+KAYQATVD VSIGT FYQCVF L
Subjt:  MANPESAPLGPSEADKNVYSVWALPPEDVAARIKTFMNSLRSEFGGPQFEPHITVVGATRLTPEDALNKFRSACQGLKAYQATVDHVSIGTFFYQCVFFL

Query:  IHPTTEVMDTSSHCCGHFGFNDSTPYMPHLSLLYANISEEKKKKAKEIADTLDEAINGLKFPITRLALYKTDTGDETLESWEKIAEHNLPSS
        IHPTTEV+  SSHCCGHFG N+STPYMPHLSLLYANIS+E KK+AKEIAD L+EA+NGLK P+TRLALYKTDTGDETL+SWEKIAEH+LPSS
Subjt:  IHPTTEVMDTSSHCCGHFGFNDSTPYMPHLSLLYANISEEKKKKAKEIADTLDEAINGLKFPITRLALYKTDTGDETLESWEKIAEHNLPSS

SwissProt top hits

e value

%identity

Alignment

O04147 Cyclic phosphodiesterase

2.7e-55

58.19

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Query:  EADKNVYSVWALPPEDVAARIKTFMNSLRSEFGGPQFEPHITVVGATRLTPEDALNKFRSACQGLKAYQATVDHVSIGTFFYQCVFFLIHPTTEVMDTSS
        E  K+VYSVWALP E+   R K  M +LRSEF GP+F PH+TV  +  LT ++A   F SAC GLKAY ATVD VS GTFF+QCVF L+  T EVM+   
Subjt:  EADKNVYSVWALPPEDVAARIKTFMNSLRSEFGGPQFEPHITVVGATRLTPEDALNKFRSACQGLKAYQATVDHVSIGTFFYQCVFFLIHPTTEVMDTSS

Query:  HCCGHFGFNDSTPYMPHLSLLYANISEEKKKKAKEIADTLDEAINGLKFPITRLALYKTDTGDETLESWEKIAEHNL
        HC  HF  + +TPYMPHLSLLYA ++EE+KK A+E A TLD +++GL F + RLAL KTDT D+TLE+WE +A  NL
Subjt:  HCCGHFGFNDSTPYMPHLSLLYANISEEKKKKAKEIADTLDEAINGLKFPITRLALYKTDTGDETLESWEKIAEHNL

Arabidopsis top hits

e value

%identity

Alignment

AT4G18930.1 RNA ligase/cyclic nucleotide phosphodiesterase family protein

1.9e-56

58.19

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Query:  EADKNVYSVWALPPEDVAARIKTFMNSLRSEFGGPQFEPHITVVGATRLTPEDALNKFRSACQGLKAYQATVDHVSIGTFFYQCVFFLIHPTTEVMDTSS
        E  K+VYSVWALP E+   R K  M +LRSEF GP+F PH+TV  +  LT ++A   F SAC GLKAY ATVD VS GTFF+QCVF L+  T EVM+   
Subjt:  EADKNVYSVWALPPEDVAARIKTFMNSLRSEFGGPQFEPHITVVGATRLTPEDALNKFRSACQGLKAYQATVDHVSIGTFFYQCVFFLIHPTTEVMDTSS

Query:  HCCGHFGFNDSTPYMPHLSLLYANISEEKKKKAKEIADTLDEAINGLKFPITRLALYKTDTGDETLESWEKIAEHNL
        HC  HF  + +TPYMPHLSLLYA ++EE+KK A+E A TLD +++GL F + RLAL KTDT D+TLE+WE +A  NL
Subjt:  HCCGHFGFNDSTPYMPHLSLLYANISEEKKKKAKEIADTLDEAINGLKFPITRLALYKTDTGDETLESWEKIAEHNL

AT4G18940.1 RNA ligase/cyclic nucleotide phosphodiesterase family protein

4.2e-43

43.72

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Query:  MANPESAPLGP------SEADKNVYSVWALPPEDVAARIKTFMNSLRSEFGGPQFEPHITVVG--ATRLTPEDALNKFRSACQGLKAYQATVDHVSIGTF
        M    + PL P       E +K +Y++WA+P +DV  R++  M  LRSEFGGP F+PH+T+VG    +LT  +A   F+SAC+G K Y ATVD VS GT 
Subjt:  MANPESAPLGP------SEADKNVYSVWALPPEDVAARIKTFMNSLRSEFGGPQFEPHITVVG--ATRLTPEDALNKFRSACQGLKAYQATVDHVSIGTF

Query:  FYQCVFFLIHPTTEVMDTSSHCCGHFGFNDSTPYMPHLSLLYANISEEKKKKAKEIADTLDEAINGLKFPITRLALYKTDTGDETLESWEKIAEHNLPS
        ++QC++  +  T EVM+ + H   HF       Y+PH+S+LY +++E +KKKA E A TLD +++GL F I R+AL+ TD     + SW K+ EH L S
Subjt:  FYQCVFFLIHPTTEVMDTSSHCCGHFGFNDSTPYMPHLSLLYANISEEKKKKAKEIADTLDEAINGLKFPITRLALYKTDTGDETLESWEKIAEHNLPS

Sequences

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CDS sequence

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ATGTCGACAACAAACTACCTTCCTTCCTTTCTCAATTTCACTGCAACAACTGTAACTGTAACTGTAACTGCATCCCTCCGCTCAATTCAATCGTCCTCCTCAAATCTCTC
GAGACGGTTCAGTCAACTCCAGCCCTTTAACACCAATCCCTCACATTCCCGTCTTCTCTTCTCTTTCTCTGCTCCAATGGCGAACCCAGAATCCGCCCCTCTTGGACCCT
CTGAAGCCGACAAGAACGTGTATTCGGTGTGGGCTCTTCCTCCAGAAGATGTGGCGGCCAGAATCAAGACTTTCATGAACAGCCTCAGATCCGAGTTCGGTGGCCCCCAA
TTCGAGCCTCACATCACCGTCGTTGGGGCCACCCGTCTCACCCCTGAGGATGCCCTCAACAAATTCCGCTCCGCTTGCCAGGGGCTTAAGGCTTATCAAGCCACCGTCGA
TCATGTATCTATCGGAACCTTCTTCTACCAGTGTGTCTTTTTCCTTATTCATCCTACCACCGAGGTCATGGATACTAGTTCACATTGCTGCGGACATTTTGGATTCAACG
ACTCTACCCCTTACATGCCGCATTTGAGCCTACTGTATGCCAACATATCAGAGGAGAAAAAGAAGAAGGCAAAAGAAATAGCGGACACACTGGATGAAGCCATTAATGGC
TTGAAGTTCCCAATCACTCGACTTGCATTGTACAAAACAGACACTGGGGATGAAACTCTAGAGTCCTGGGAGAAAATTGCAGAACACAATCTTCCTTCAAGTTAG

mRNA sequence

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Protein sequence

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MSTTNYLPSFLNFTATTVTVTVTASLRSIQSSSSNLSRRFSQLQPFNTNPSHSRLLFSFSAPMANPESAPLGPSEADKNVYSVWALPPEDVAARIKTFMNSLRSEFGGPQ
FEPHITVVGATRLTPEDALNKFRSACQGLKAYQATVDHVSIGTFFYQCVFFLIHPTTEVMDTSSHCCGHFGFNDSTPYMPHLSLLYANISEEKKKKAKEIADTLDEAING
LKFPITRLALYKTDTGDETLESWEKIAEHNLPSS

Spg011925 (gene) of Sponge gourd (cylindrica) v1 genome