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Spg011955 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg011955
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprefoldin subunit 6
Genome locationscaffold1:1731459..1733949
RNA-Seq ExpressionSpg011955
SyntenySpg011955
Gene Ontology termsGO:0006457 - protein folding (biological process)
GO:0016043 - cellular component organization (biological process)
GO:0016272 - prefoldin complex (cellular component)
GO:0051082 - unfolded protein binding (molecular function)
InterPro domainsIPR002777 - Prefoldin beta-like
IPR009053 - Prefoldin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_006305775.1 prefoldin subunit 6 [Capsella rubella]7.9e-2449.23Show/hide
Query:  MSSFTIIKELQRDLKMKGRDLRNLQKGKHRNFDLPLSFFALTVRLSLLNPELDMLKEDAIVYRLVGPILVKQDLGEPNANVQKRIGHLAAELDRVDAIIG
        MSS T +++LQRDL+ K  DL  +QK   +N  L   +        L+  ELD+L+EDA VY+L+GP+LVKQDL E NANV+KRI +++AEL R+DAI+ 
Subjt:  MSSFTIIKELQRDLKMKGRDLRNLQKGKHRNFDLPLSFFALTVRLSLLNPELDMLKEDAIVYRLVGPILVKQDLGEPNANVQKRIGHLAAELDRVDAIIG

Query:  DFEEKQISKREKISKVERRIRSLKLGMTNA
        D EEKQ +KRE I K+++R++S++ G   A
Subjt:  DFEEKQISKREKISKVERRIRSLKLGMTNA

XP_010110983.2 prefoldin subunit 6 [Morus notabilis]1.4e-2352.38Show/hide
Query:  MSSFTIIKELQRDLKMKGRDLRNLQKGKHRNFDLPLSFFALTVRLSLLNPELDMLKEDAIVYRLVGPILVKQDLGEPNANVQKRIGHLAAELDRVDAIIG
        M+S + +KELQRDL+ K  DL  LQK   +N  +   +        L+  ELD+LKEDA VY+L+GP+LVKQDL E NANV+KRI +++AEL R+DA + 
Subjt:  MSSFTIIKELQRDLKMKGRDLRNLQKGKHRNFDLPLSFFALTVRLSLLNPELDMLKEDAIVYRLVGPILVKQDLGEPNANVQKRIGHLAAELDRVDAIIG

Query:  DFEEKQISKREKISKVERRIRSLKLG
        D EEKQ SK+E I KV+ RI+SL+ G
Subjt:  DFEEKQISKREKISKVERRIRSLKLG

XP_010460778.1 PREDICTED: prefoldin subunit 6-like [Camelina sativa]7.9e-2449.23Show/hide
Query:  MSSFTIIKELQRDLKMKGRDLRNLQKGKHRNFDLPLSFFALTVRLSLLNPELDMLKEDAIVYRLVGPILVKQDLGEPNANVQKRIGHLAAELDRVDAIIG
        MSS T +++LQRDL+ K  DL  +QK   +N  L   +        L+  ELD+L+EDA VY+L+GP+LVKQDL E NANV+KRI +++AEL R+DAI+ 
Subjt:  MSSFTIIKELQRDLKMKGRDLRNLQKGKHRNFDLPLSFFALTVRLSLLNPELDMLKEDAIVYRLVGPILVKQDLGEPNANVQKRIGHLAAELDRVDAIIG

Query:  DFEEKQISKREKISKVERRIRSLKLGMTNA
        D EEKQ +KRE I K+++R++S++ G   A
Subjt:  DFEEKQISKREKISKVERRIRSLKLGMTNA

XP_010499519.1 PREDICTED: prefoldin subunit 6 [Camelina sativa]1.0e-2348.46Show/hide
Query:  MSSFTIIKELQRDLKMKGRDLRNLQKGKHRNFDLPLSFFALTVRLSLLNPELDMLKEDAIVYRLVGPILVKQDLGEPNANVQKRIGHLAAELDRVDAIIG
        MSS T +++LQRDL+ K  DL  +QK   +N  L   +        L+  ELD+L+EDA VY+L+GP+LVKQDL E NAN++KRI +++AEL R+DAI+ 
Subjt:  MSSFTIIKELQRDLKMKGRDLRNLQKGKHRNFDLPLSFFALTVRLSLLNPELDMLKEDAIVYRLVGPILVKQDLGEPNANVQKRIGHLAAELDRVDAIIG

Query:  DFEEKQISKREKISKVERRIRSLKLGMTNA
        D EEKQ +KRE I K+++R++S++ G   A
Subjt:  DFEEKQISKREKISKVERRIRSLKLGMTNA

XP_021626852.1 prefoldin subunit 6 [Manihot esculenta]1.0e-2350.77Show/hide
Query:  MSSFTIIKELQRDLKMKGRDLRNLQKGKHRNFDLPLSFFALTVRLSLLNPELDMLKEDAIVYRLVGPILVKQDLGEPNANVQKRIGHLAAELDRVDAIIG
        M+S T I+ELQRDL+ K  DL  LQK   +N  +   +        L+  ELD+L EDA VY+L+GP+LVKQDL E NANV+KRI +++AEL R+DA + 
Subjt:  MSSFTIIKELQRDLKMKGRDLRNLQKGKHRNFDLPLSFFALTVRLSLLNPELDMLKEDAIVYRLVGPILVKQDLGEPNANVQKRIGHLAAELDRVDAIIG

Query:  DFEEKQISKREKISKVERRIRSLKLGMTNA
        D EEKQ SK++ I KV++RI+SL+ G   A
Subjt:  DFEEKQISKREKISKVERRIRSLKLGMTNA

TrEMBL top hitse value%identityAlignment
A0A061GKX2 Prefoldin 6 isoform 11.1e-2351.16Show/hide
Query:  SSFTIIKELQRDLKMKGRDLRNLQKGKHRNFDLPLSFFALTVRLSLLNPELDMLKEDAIVYRLVGPILVKQDLGEPNANVQKRIGHLAAELDRVDAIIGD
        SS T ++ELQRDL+ K  DL  LQK   +N  +   +        L+  ELD+L EDA VY+L+GP+LVKQDL E NANV+KRI +++AEL R+DA + D
Subjt:  SSFTIIKELQRDLKMKGRDLRNLQKGKHRNFDLPLSFFALTVRLSLLNPELDMLKEDAIVYRLVGPILVKQDLGEPNANVQKRIGHLAAELDRVDAIIGD

Query:  FEEKQISKREKISKVERRIRSLKLGMTNA
         EEKQ SKRE I KV++RI+S + G   A
Subjt:  FEEKQISKREKISKVERRIRSLKLGMTNA

A0A2C9UYI5 Uncharacterized protein5.0e-2450.77Show/hide
Query:  MSSFTIIKELQRDLKMKGRDLRNLQKGKHRNFDLPLSFFALTVRLSLLNPELDMLKEDAIVYRLVGPILVKQDLGEPNANVQKRIGHLAAELDRVDAIIG
        M+S T I+ELQRDL+ K  DL  LQK   +N  +   +        L+  ELD+L EDA VY+L+GP+LVKQDL E NANV+KRI +++AEL R+DA + 
Subjt:  MSSFTIIKELQRDLKMKGRDLRNLQKGKHRNFDLPLSFFALTVRLSLLNPELDMLKEDAIVYRLVGPILVKQDLGEPNANVQKRIGHLAAELDRVDAIIG

Query:  DFEEKQISKREKISKVERRIRSLKLGMTNA
        D EEKQ SK++ I KV++RI+SL+ G   A
Subjt:  DFEEKQISKREKISKVERRIRSLKLGMTNA

A0A6J1B4T0 prefoldin subunit 61.1e-2351.16Show/hide
Query:  SSFTIIKELQRDLKMKGRDLRNLQKGKHRNFDLPLSFFALTVRLSLLNPELDMLKEDAIVYRLVGPILVKQDLGEPNANVQKRIGHLAAELDRVDAIIGD
        SS T ++ELQRDL+ K  DL  LQK   +N  +   +        L+  ELD+L EDA VY+L+GP+LVKQDL E NANV+KRI +++AEL R+DA + D
Subjt:  SSFTIIKELQRDLKMKGRDLRNLQKGKHRNFDLPLSFFALTVRLSLLNPELDMLKEDAIVYRLVGPILVKQDLGEPNANVQKRIGHLAAELDRVDAIIGD

Query:  FEEKQISKREKISKVERRIRSLKLGMTNA
         EEKQ SKRE I KV++RI+S + G   A
Subjt:  FEEKQISKREKISKVERRIRSLKLGMTNA

D7KEP4 Uncharacterized protein8.6e-2448.46Show/hide
Query:  MSSFTIIKELQRDLKMKGRDLRNLQKGKHRNFDLPLSFFALTVRLSLLNPELDMLKEDAIVYRLVGPILVKQDLGEPNANVQKRIGHLAAELDRVDAIIG
        MSS T +++LQ+DL+ K  DL  +QK   +N  L   +        L+  ELD+L+EDA VY+L+GP+LVKQDL E NANV+KRI +++AEL R+DAI+ 
Subjt:  MSSFTIIKELQRDLKMKGRDLRNLQKGKHRNFDLPLSFFALTVRLSLLNPELDMLKEDAIVYRLVGPILVKQDLGEPNANVQKRIGHLAAELDRVDAIIG

Query:  DFEEKQISKREKISKVERRIRSLKLGMTNA
        D EEKQ +KRE I K+++R++S++ G   A
Subjt:  DFEEKQISKREKISKVERRIRSLKLGMTNA

R0INH2 Uncharacterized protein3.8e-2449.23Show/hide
Query:  MSSFTIIKELQRDLKMKGRDLRNLQKGKHRNFDLPLSFFALTVRLSLLNPELDMLKEDAIVYRLVGPILVKQDLGEPNANVQKRIGHLAAELDRVDAIIG
        MSS T +++LQRDL+ K  DL  +QK   +N  L   +        L+  ELD+L+EDA VY+L+GP+LVKQDL E NANV+KRI +++AEL R+DAI+ 
Subjt:  MSSFTIIKELQRDLKMKGRDLRNLQKGKHRNFDLPLSFFALTVRLSLLNPELDMLKEDAIVYRLVGPILVKQDLGEPNANVQKRIGHLAAELDRVDAIIG

Query:  DFEEKQISKREKISKVERRIRSLKLGMTNA
        D EEKQ +KRE I K+++R++S++ G   A
Subjt:  DFEEKQISKREKISKVERRIRSLKLGMTNA

SwissProt top hitse value%identityAlignment
A8Y197 Probable prefoldin subunit 63.0e-1031.07Show/hide
Query:  LRNLQKGKHRNFDLPLSFFALTVRLSLLNPELDMLKEDAIVYRLVGPILVKQDLGEPNANVQKRIGHLAAELDRVDAIIGDFEEKQISKREKISKVERRI
        L+ L+K + + F               +  ELD++  D+ VY+L+GP+LV+QDL E  + V+KR+  + +E+ RV+A I D  +K I +R+K+  +++  
Subjt:  LRNLQKGKHRNFDLPLSFFALTVRLSLLNPELDMLKEDAIVYRLVGPILVKQDLGEPNANVQKRIGHLAAELDRVDAIIGDFEEKQISKREKISKVERRI

Query:  RSL
        + +
Subjt:  RSL

O15212 Prefoldin subunit 62.8e-0826.45Show/hide
Query:  LQRDLKMKGRDLRNLQKGKHRNFDLPLSFFALTVRLSLLNPELDMLKEDAIVYRLVGPILVKQDLGEPNANVQKRIGHLAAELDRVDAIIGDFEEKQISK
        +Q+ L+ +    + LQK   ++        A     +++  EL +L    +V++L+GP+LVKQ+LGE  A V KR+ ++ AE+ R ++ + D E +   +
Subjt:  LQRDLKMKGRDLRNLQKGKHRNFDLPLSFFALTVRLSLLNPELDMLKEDAIVYRLVGPILVKQDLGEPNANVQKRIGHLAAELDRVDAIIGDFEEKQISK

Query:  REKISKVERRIRSLKLGMTNA
        RE ++++++  +  +     A
Subjt:  REKISKVERRIRSLKLGMTNA

P52554 Probable prefoldin subunit 65.7e-0930.1Show/hide
Query:  LRNLQKGKHRNFDLPLSFFALTVRLSLLNPELDMLKEDAIVYRLVGPILVKQDLGEPNANVQKRIGHLAAELDRVDAIIGDFEEKQISKREKISKVERRI
        LR L+K + + F               +  ELD+++ D+ VY+L+G +LV+QDL E  + V+KR+  + +E  RV+A I D  +K   +R+K+  +++  
Subjt:  LRNLQKGKHRNFDLPLSFFALTVRLSLLNPELDMLKEDAIVYRLVGPILVKQDLGEPNANVQKRIGHLAAELDRVDAIIGDFEEKQISKREKISKVERRI

Query:  RSL
        + +
Subjt:  RSL

Q17Q89 Prefoldin subunit 61.7e-0826.45Show/hide
Query:  LQRDLKMKGRDLRNLQKGKHRNFDLPLSFFALTVRLSLLNPELDMLKEDAIVYRLVGPILVKQDLGEPNANVQKRIGHLAAELDRVDAIIGDFEEKQISK
        +Q+ L+ +    + LQK   ++        A     +++  EL +L    +V++L+GP+LVKQ+LGE  A V KR+ ++ AE+ R ++ + D E++   +
Subjt:  LQRDLKMKGRDLRNLQKGKHRNFDLPLSFFALTVRLSLLNPELDMLKEDAIVYRLVGPILVKQDLGEPNANVQKRIGHLAAELDRVDAIIGDFEEKQISK

Query:  REKISKVERRIRSLKLGMTNA
        RE ++++++  +  +     A
Subjt:  REKISKVERRIRSLKLGMTNA

Q5TJE6 Prefoldin subunit 62.8e-0826.45Show/hide
Query:  LQRDLKMKGRDLRNLQKGKHRNFDLPLSFFALTVRLSLLNPELDMLKEDAIVYRLVGPILVKQDLGEPNANVQKRIGHLAAELDRVDAIIGDFEEKQISK
        +Q+ L+ +    + LQK   ++        A     +++  EL +L    +V++L+GP+LVKQ+LGE  A V KR+ ++ AE+ R ++ + D E +   +
Subjt:  LQRDLKMKGRDLRNLQKGKHRNFDLPLSFFALTVRLSLLNPELDMLKEDAIVYRLVGPILVKQDLGEPNANVQKRIGHLAAELDRVDAIIGDFEEKQISK

Query:  REKISKVERRIRSLKLGMTNA
        RE ++++++  +  +     A
Subjt:  REKISKVERRIRSLKLGMTNA

Arabidopsis top hitse value%identityAlignment
AT1G29990.1 prefoldin 63.1e-2648.46Show/hide
Query:  MSSFTIIKELQRDLKMKGRDLRNLQKGKHRNFDLPLSFFALTVRLSLLNPELDMLKEDAIVYRLVGPILVKQDLGEPNANVQKRIGHLAAELDRVDAIIG
        MSS T +++LQRDL+ K  DL  +QK   +N  L   +        L+  ELD+L+EDA VY+L+GP+LVKQDL E NANV+KRI +++AEL R+DAI+ 
Subjt:  MSSFTIIKELQRDLKMKGRDLRNLQKGKHRNFDLPLSFFALTVRLSLLNPELDMLKEDAIVYRLVGPILVKQDLGEPNANVQKRIGHLAAELDRVDAIIG

Query:  DFEEKQISKREKISKVERRIRSLKLGMTNA
        D EEKQ +KRE I K+++R+++++ G   A
Subjt:  DFEEKQISKREKISKVERRIRSLKLGMTNA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTCCTTCACGATTATCAAGGAGCTTCAGCGCGATCTCAAGATGAAAGGCAGAGATCTCAGAAATTTACAGAAAGGCAAGCATCGTAACTTCGATCTTCCTCTCTC
TTTCTTCGCTCTCACCGTCCGACTTAGCCTTCTCAATCCTGAGTTGGATATGCTGAAAGAGGATGCAATTGTTTACAGATTAGTTGGTCCTATTCTTGTGAAGCAAGATC
TAGGAGAGCCAAATGCAAATGTTCAAAAGAGAATTGGTCATCTCGCTGCTGAATTAGACCGCGTTGATGCAATTATCGGAGATTTTGAAGAGAAGCAAATTAGCAAAAGA
GAGAAGATTTCCAAGGTAGAGCGAAGGATTCGATCTCTTAAGCTTGGGATGACAAATGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCTCCTTCACGATTATCAAGGAGCTTCAGCGCGATCTCAAGATGAAAGGCAGAGATCTCAGAAATTTACAGAAAGGCAAGCATCGTAACTTCGATCTTCCTCTCTC
TTTCTTCGCTCTCACCGTCCGACTTAGCCTTCTCAATCCTGAGTTGGATATGCTGAAAGAGGATGCAATTGTTTACAGATTAGTTGGTCCTATTCTTGTGAAGCAAGATC
TAGGAGAGCCAAATGCAAATGTTCAAAAGAGAATTGGTCATCTCGCTGCTGAATTAGACCGCGTTGATGCAATTATCGGAGATTTTGAAGAGAAGCAAATTAGCAAAAGA
GAGAAGATTTCCAAGGTAGAGCGAAGGATTCGATCTCTTAAGCTTGGGATGACAAATGCATAG
Protein sequenceShow/hide protein sequence
MSSFTIIKELQRDLKMKGRDLRNLQKGKHRNFDLPLSFFALTVRLSLLNPELDMLKEDAIVYRLVGPILVKQDLGEPNANVQKRIGHLAAELDRVDAIIGDFEEKQISKR
EKISKVERRIRSLKLGMTNA