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Spg011978 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg011978
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionVacuolar ATPase assembly integral membrane protein VMA21 homolog
Genome locationscaffold1:664828..666315
RNA-Seq ExpressionSpg011978
SyntenySpg011978
Gene Ontology termsGO:0070072 - vacuolar proton-transporting V-type ATPase complex assembly (biological process)
GO:0005783 - endoplasmic reticulum (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0031410 - cytoplasmic vesicle (cellular component)
GO:0098588 - bounding membrane of organelle (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052446.1 hypothetical protein E6C27_scaffold120G00430 [Cucumis melo var. makuwa]7.7e-0765.38Show/hide
Query:  VPMASVIMKFFIASLFMWITPIALLYGFNHNLIPGKIYLHKYLHLLLMSLLS
        VPMA+VI KFFIASLFMWITPI LL+GFNHN IPG   L+ +   LL   L+
Subjt:  VPMASVIMKFFIASLFMWITPIALLYGFNHNLIPGKIYLHKYLHLLLMSLLS
XP_022146488.1 uncharacterized protein LOC111015696 [Momordica charantia]5.3e-0872Show/hide
Query:  MASVIMKFFIASLFMWITPIALLYGFNHNLIPGKIYLHKYLHLLLMSLLS
        MASVIMKFF ASLFMWITPIALLYGFNHNLIPG   L+ +   LL   L+
Subjt:  MASVIMKFFIASLFMWITPIALLYGFNHNLIPGKIYLHKYLHLLLMSLLS
XP_022926009.1 uncharacterized protein LOC111433255 [Cucurbita moschata]7.7e-0768Show/hide
Query:  MASVIMKFFIASLFMWITPIALLYGFNHNLIPGKIYLHKYLHLLLMSLLS
        MA VI KFFIASLFMWITPI LLYGFNHNLIPG   L+ +   LL   L+
Subjt:  MASVIMKFFIASLFMWITPIALLYGFNHNLIPGKIYLHKYLHLLLMSLLS
XP_022977993.1 uncharacterized protein LOC111478118 [Cucurbita maxima]3.4e-0768Show/hide
Query:  MASVIMKFFIASLFMWITPIALLYGFNHNLIPGKIYLHKYLHLLLMSLLS
        MA VI KFFIASLFMWITPI LLYGFNHNLIPG  +L+ +   LL   L+
Subjt:  MASVIMKFFIASLFMWITPIALLYGFNHNLIPGKIYLHKYLHLLLMSLLS
XP_038882777.1 protein SUPPRESSOR OF FRI 4-like isoform X1 [Benincasa hispida]6.3e-0971.15Show/hide
Query:  VPMASVIMKFFIASLFMWITPIALLYGFNHNLIPGKIYLHKYLHLLLMSLLS
        +PMASVI KFFIASLFMWITPIALLYGFNHNLIPG   L+ +   LL   L+
Subjt:  VPMASVIMKFFIASLFMWITPIALLYGFNHNLIPGKIYLHKYLHLLLMSLLS
TrEMBL top hitse value%identityAlignment
A0A0A0KPB7 Vacuolar ATPase assembly integral membrane protein VMA21 homolog5.7e-0867.31Show/hide
Query:  VPMASVIMKFFIASLFMWITPIALLYGFNHNLIPGKIYLHKYLHLLLMSLLS
        VPMA+VIMKFFIASLFMWITPI LL+GFNHN IPG   L+ +   LL   L+
Subjt:  VPMASVIMKFFIASLFMWITPIALLYGFNHNLIPGKIYLHKYLHLLLMSLLS
A0A5A7UE48 Vacuolar ATPase assembly integral membrane protein VMA21 homolog3.7e-0765.38Show/hide
Query:  VPMASVIMKFFIASLFMWITPIALLYGFNHNLIPGKIYLHKYLHLLLMSLLS
        VPMA+VI KFFIASLFMWITPI LL+GFNHN IPG   L+ +   LL   L+
Subjt:  VPMASVIMKFFIASLFMWITPIALLYGFNHNLIPGKIYLHKYLHLLLMSLLS
A0A6J1CYA2 Vacuolar ATPase assembly integral membrane protein VMA21 homolog2.6e-0872Show/hide
Query:  MASVIMKFFIASLFMWITPIALLYGFNHNLIPGKIYLHKYLHLLLMSLLS
        MASVIMKFF ASLFMWITPIALLYGFNHNLIPG   L+ +   LL   L+
Subjt:  MASVIMKFFIASLFMWITPIALLYGFNHNLIPGKIYLHKYLHLLLMSLLS
A0A6J1EJT7 Vacuolar ATPase assembly integral membrane protein VMA21 homolog3.7e-0768Show/hide
Query:  MASVIMKFFIASLFMWITPIALLYGFNHNLIPGKIYLHKYLHLLLMSLLS
        MA VI KFFIASLFMWITPI LLYGFNHNLIPG   L+ +   LL   L+
Subjt:  MASVIMKFFIASLFMWITPIALLYGFNHNLIPGKIYLHKYLHLLLMSLLS
A0A6J1ISV9 Vacuolar ATPase assembly integral membrane protein VMA21 homolog1.7e-0768Show/hide
Query:  MASVIMKFFIASLFMWITPIALLYGFNHNLIPGKIYLHKYLHLLLMSLLS
        MA VI KFFIASLFMWITPI LLYGFNHNLIPG  +L+ +   LL   L+
Subjt:  MASVIMKFFIASLFMWITPIALLYGFNHNLIPGKIYLHKYLHLLLMSLLS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G05780.1 Vacuolar ATPase assembly integral membrane protein VMA21-like domain8.7e-0956Show/hide
Query:  MASVIMKFFIASLFMWITPIALLYGFNHNLIPGKIYLHKYLHLLLMSLLS
        MA V+ KF IAS+FMWI P+A+LYGFNHNL+PG   L  +  +LL   L+
Subjt:  MASVIMKFFIASLFMWITPIALLYGFNHNLIPGKIYLHKYLHLLLMSLLS
AT2G31710.1 Vacuolar ATPase assembly integral membrane protein VMA21-like domain2.1e-0754Show/hide
Query:  MASVIMKFFIASLFMWITPIALLYGFNHNLIPGKIYLHKYLHLLLMSLLS
        MA V+ KF IAS+FMWI PIA+LYGFN++L+PG   L  +   LL   L+
Subjt:  MASVIMKFFIASLFMWITPIALLYGFNHNLIPGKIYLHKYLHLLLMSLLS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGTCTCGTCGCCGGCGACCTGTCGCCAGAAGCACTAGCCATCCGCACGCGCTAGAGGACCTGCGGCCGCGTCGTCTGTCAGCCACCGCGTGCCGCTACGAAGAAGAACG
CCGAACAGGACCCACGCTGTCACCGTCTAGCCCAAATCCAGCCTTGATTCCGACTCCTGTACCAATGGCAAGCGTCATTATGAAGTTCTTCATTGCATCACTGTTTATGT
GGATAACTCCCATCGCATTGTTATATGGTTTTAACCATAATTTGATTCCTGGTAAGATTTATTTGCACAAGTACTTACATCTGTTGCTAATGTCGTTGCTTTCCCCCCTG
AAAGATTTTTGA
mRNA sequenceShow/hide mRNA sequence
GAGTCTCGTCGCCGGCGACCTGTCGCCAGAAGCACTAGCCATCCGCACGCGCTAGAGGACCTGCGGCCGCGTCGTCTGTCAGCCACCGCGTGCCGCTACGAAGAAGAACG
CCGAACAGGACCCACGCTGTCACCGTCTAGCCCAAATCCAGCCTTGATTCCGACTCCTGTACCAATGGCAAGCGTCATTATGAAGTTCTTCATTGCATCACTGTTTATGT
GGATAACTCCCATCGCATTGTTATATGGTTTTAACCATAATTTGATTCCTGGTAAGATTTATTTGCACAAGTACTTACATCTGTTGCTAATGTCGTTGCTTTCCCCCCTG
AAAGATTTTTGA
Protein sequenceShow/hide protein sequence
ESRRRRPVARSTSHPHALEDLRPRRLSATACRYEEERRTGPTLSPSSPNPALIPTPVPMASVIMKFFIASLFMWITPIALLYGFNHNLIPGKIYLHKYLHLLLMSLLSPL
KDF