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Spg012002 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg012002
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionzf-RVT domain-containing protein
Genome locationscaffold1:1054436..1055749
RNA-Seq ExpressionSpg012002
SyntenySpg012002
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054311.1 golgin subfamily A member 6-like protein 22 isoform X2 [Cucumis melo var. makuwa]9.4e-1530.08Show/hide
Query:  KNHFVANVLNPSESSLSYSFGFSQSLSHRETIDILTLLSLIKEVSFKPDRRDIRLWSPNLSQGFIYRSFFHCLLDPSSTEESVCSLIWKVKVPKKVQSFT
        + H + ++++P    +S+S+GF  +L+++E  ++ +LL+L+   +FK +RRD+R+ +PN S GFI +S F  LLDPS   E V  ++ + KVPKKV+ F 
Subjt:  KNHFVANVLNPSESSLSYSFGFSQSLSHRETIDILTLLSLIKEVSFKPDRRDIRLWSPNLSQGFIYRSFFHCLLDPSSTEESVCSLIWKVKVPKKVQSFT

Query:  CQPKLNPRRRSSVPLKLRRAIEVWSQNQLRPTDAHPYCQVLHGRANTFNRLSRNMPYLIGPFCCILCRMAKEDLDHILWHYDFASSVWNNFFERLKFVRH
                               W              QVL GR    +RL R    LI PFCCILCR         +    + +    +    L  +  
Subjt:  CQPKLNPRRRSSVPLKLRRAIEVWSQNQLRPTDAHPYCQVLHGRANTFNRLSRNMPYLIGPFCCILCRMAKEDLDHILWHYDFASSVWNNFFERLKFVRH

Query:  RDFRKMIKEFFPHLLFENRGTFCGSLGFMLLFGRLG
         ++R  ++        E +G F G  GF+LLFG  G
Subjt:  RDFRKMIKEFFPHLLFENRGTFCGSLGFMLLFGRLG

TYK09969.1 calpain-type cysteine protease DEK1 [Cucumis melo var. makuwa]1.1e-2332Show/hide
Query:  MKNHFVANVLNPSESSLSYSFGFSQSLSHRETIDILTLLSLIKEVSFKPDRRDIRLWSPNLSQGFIYRSFFHCLLDPSSTEESVCSLIWKVKVPKKVQSF
        +KNHF+A+ L  + +S S+SFGF ++LS RET +++ L+SL++  SF+  RRD+ +WSP   +GF+ +SFF CL++ + T ESV SLIW++KVP+K   F
Subjt:  MKNHFVANVLNPSESSLSYSFGFSQSLSHRETIDILTLLSLIKEVSFKPDRRDIRLWSPNLSQGFIYRSFFHCLLDPSSTEESVCSLIWKVKVPKKVQSF

Query:  TCQPKLNPRRRSSVPLKLRRAIEVWSQNQLRPTDAHPYCQVLHGRANTFNRLSRNMPYLIGPFCCILCRMAKEDLDHILWHYDFASSVWNNFFER--LKF
        + Q                                                                    +EDLDH+LWH +  S VW++F +   L +
Subjt:  TCQPKLNPRRRSSVPLKLRRAIEVWSQNQLRPTDAHPYCQVLHGRANTFNRLSRNMPYLIGPFCCILCRMAKEDLDHILWHYDFASSVWNNFFER--LKF

Query:  VRHRDFRKMIKEFFPHLLFENRGTF
         RHRD R  ++EF  +     RG F
Subjt:  VRHRDFRKMIKEFFPHLLFENRGTF

TYK29954.1 reverse transcriptase [Cucumis melo var. makuwa]1.7e-1637.04Show/hide
Query:  RDIRLWSPNLSQGFIYRSFFHCLLDPSSTEESVCSLIWKVKVPKKVQSFTCQPKLNPRRRSSVPLKLRRAIEVWSQNQLRPTDAHPYCQVLHGRANTFNR
        R++ +WS N SQGF  +S F  LLDPS T E V   +W++KV KKV+ FT Q  L+  R + V   +RR    WS N                       
Subjt:  RDIRLWSPNLSQGFIYRSFFHCLLDPSSTEESVCSLIWKVKVPKKVQSFTCQPKLNPRRRSSVPLKLRRAIEVWSQNQLRPTDAHPYCQVLHGRANTFNR

Query:  LSRNMPYLIGPFCCILCRMAKEDLDHILWHYDFASSVWNNFFER--LKFVRHRDFRKMIKEF
                    CCILCR AKEDLDH+LW   +A +VW +F +   ++    R  RK I+EF
Subjt:  LSRNMPYLIGPFCCILCRMAKEDLDHILWHYDFASSVWNNFFER--LKFVRHRDFRKMIKEF

XP_008464727.1 PREDICTED: uncharacterized protein LOC103502543 [Cucumis melo]7.2e-1535.76Show/hide
Query:  SHRETIDILTLLSLIKEVSFKPDRRDIRLWSPNLSQGFIYRSFFHCLLDPSSTEESVCSLIWKVKVPKKVQSFTCQPKLNPRRRSSVPLKLRRAIEVWSQ
        S +E   + +LLS +K  SF+  RRDI +W+PN S GF   S F  LLDP+ T+E V  ++W   VPKKV  F                       +W  
Subjt:  SHRETIDILTLLSLIKEVSFKPDRRDIRLWSPNLSQGFIYRSFFHCLLDPSSTEESVCSLIWKVKVPKKVQSFTCQPKLNPRRRSSVPLKLRRAIEVWSQ

Query:  NQLRPTDAHPYCQVLHGRANTFNRLSRNMPYLIGPFCCILCRMAKEDLDHI
                    QVL  + N  +RL R    L+G FCC+LC+ A+ DLDH+
Subjt:  NQLRPTDAHPYCQVLHGRANTFNRLSRNMPYLIGPFCCILCRMAKEDLDHI

XP_023554066.1 epimerase family protein SDR39U1 homolog, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo]1.4e-1332.31Show/hide
Query:  SYSFGFSQSLSHRETIDILTLLSLIKEVSFKPDRRDIRLWSPNLSQGFIYRSFFHCLLDPSSTEESVCSLIWKVKVPKKVQSFTCQPKLNPRRRSSVPLK
        S  FGF   LS RE+ D+ +LLS +  V      R+I  WSPN S+G  Y SFF  L  P ++  S      KV + KKV+ FT                
Subjt:  SYSFGFSQSLSHRETIDILTLLSLIKEVSFKPDRRDIRLWSPNLSQGFIYRSFFHCLLDPSSTEESVCSLIWKVKVPKKVQSFTCQPKLNPRRRSSVPLK

Query:  LRRAIEVWSQNQLRPTDAHPYCQVLHGRANTFNRLSRNMPYLIGPFCCILCRMAKEDLDHILWHYDFASSVWNNFFER--LKFVRHRDFRKMIKE
               W              Q LHGR NT   + ++  +L+GP  C     A E+LDHI+    FA   W+ F E   ++  R+RD   M+ E
Subjt:  LRRAIEVWSQNQLRPTDAHPYCQVLHGRANTFNRLSRNMPYLIGPFCCILCRMAKEDLDHILWHYDFASSVWNNFFER--LKFVRHRDFRKMIKE

TrEMBL top hitse value%identityAlignment
A0A1S3CMM8 uncharacterized protein LOC1035025433.5e-1535.76Show/hide
Query:  SHRETIDILTLLSLIKEVSFKPDRRDIRLWSPNLSQGFIYRSFFHCLLDPSSTEESVCSLIWKVKVPKKVQSFTCQPKLNPRRRSSVPLKLRRAIEVWSQ
        S +E   + +LLS +K  SF+  RRDI +W+PN S GF   S F  LLDP+ T+E V  ++W   VPKKV  F                       +W  
Subjt:  SHRETIDILTLLSLIKEVSFKPDRRDIRLWSPNLSQGFIYRSFFHCLLDPSSTEESVCSLIWKVKVPKKVQSFTCQPKLNPRRRSSVPLKLRRAIEVWSQ

Query:  NQLRPTDAHPYCQVLHGRANTFNRLSRNMPYLIGPFCCILCRMAKEDLDHI
                    QVL  + N  +RL R    L+G FCC+LC+ A+ DLDH+
Subjt:  NQLRPTDAHPYCQVLHGRANTFNRLSRNMPYLIGPFCCILCRMAKEDLDHI

A0A5A7TIU4 Zinc finger protein ZPR1-like4.7e-1246.07Show/hide
Query:  ESSLSYSFGFSQSLSHRETIDILTLLSLIKEVSFKPDRRDIRLWSPNLSQGFIYRSFFHCLLDPSSTEESVCSLIWKVKVPKKVQSFTC
        E+  S+S GF  +L++RE   + +LLSL++   F+  RRD+R+WSPN S     +S F  LLDPS   ESV  ++W+ KVPKKV+ F C
Subjt:  ESSLSYSFGFSQSLSHRETIDILTLLSLIKEVSFKPDRRDIRLWSPNLSQGFIYRSFFHCLLDPSSTEESVCSLIWKVKVPKKVQSFTC

A0A5A7UL95 Golgin subfamily A member 6-like protein 22 isoform X24.5e-1530.08Show/hide
Query:  KNHFVANVLNPSESSLSYSFGFSQSLSHRETIDILTLLSLIKEVSFKPDRRDIRLWSPNLSQGFIYRSFFHCLLDPSSTEESVCSLIWKVKVPKKVQSFT
        + H + ++++P    +S+S+GF  +L+++E  ++ +LL+L+   +FK +RRD+R+ +PN S GFI +S F  LLDPS   E V  ++ + KVPKKV+ F 
Subjt:  KNHFVANVLNPSESSLSYSFGFSQSLSHRETIDILTLLSLIKEVSFKPDRRDIRLWSPNLSQGFIYRSFFHCLLDPSSTEESVCSLIWKVKVPKKVQSFT

Query:  CQPKLNPRRRSSVPLKLRRAIEVWSQNQLRPTDAHPYCQVLHGRANTFNRLSRNMPYLIGPFCCILCRMAKEDLDHILWHYDFASSVWNNFFERLKFVRH
                               W              QVL GR    +RL R    LI PFCCILCR         +    + +    +    L  +  
Subjt:  CQPKLNPRRRSSVPLKLRRAIEVWSQNQLRPTDAHPYCQVLHGRANTFNRLSRNMPYLIGPFCCILCRMAKEDLDHILWHYDFASSVWNNFFERLKFVRH

Query:  RDFRKMIKEFFPHLLFENRGTFCGSLGFMLLFGRLG
         ++R  ++        E +G F G  GF+LLFG  G
Subjt:  RDFRKMIKEFFPHLLFENRGTFCGSLGFMLLFGRLG

A0A5D3CI74 Calpain-type cysteine protease DEK15.4e-2432Show/hide
Query:  MKNHFVANVLNPSESSLSYSFGFSQSLSHRETIDILTLLSLIKEVSFKPDRRDIRLWSPNLSQGFIYRSFFHCLLDPSSTEESVCSLIWKVKVPKKVQSF
        +KNHF+A+ L  + +S S+SFGF ++LS RET +++ L+SL++  SF+  RRD+ +WSP   +GF+ +SFF CL++ + T ESV SLIW++KVP+K   F
Subjt:  MKNHFVANVLNPSESSLSYSFGFSQSLSHRETIDILTLLSLIKEVSFKPDRRDIRLWSPNLSQGFIYRSFFHCLLDPSSTEESVCSLIWKVKVPKKVQSF

Query:  TCQPKLNPRRRSSVPLKLRRAIEVWSQNQLRPTDAHPYCQVLHGRANTFNRLSRNMPYLIGPFCCILCRMAKEDLDHILWHYDFASSVWNNFFER--LKF
        + Q                                                                    +EDLDH+LWH +  S VW++F +   L +
Subjt:  TCQPKLNPRRRSSVPLKLRRAIEVWSQNQLRPTDAHPYCQVLHGRANTFNRLSRNMPYLIGPFCCILCRMAKEDLDHILWHYDFASSVWNNFFER--LKF

Query:  VRHRDFRKMIKEFFPHLLFENRGTF
         RHRD R  ++EF  +     RG F
Subjt:  VRHRDFRKMIKEFFPHLLFENRGTF

A0A5D3E255 Reverse transcriptase8.3e-1737.04Show/hide
Query:  RDIRLWSPNLSQGFIYRSFFHCLLDPSSTEESVCSLIWKVKVPKKVQSFTCQPKLNPRRRSSVPLKLRRAIEVWSQNQLRPTDAHPYCQVLHGRANTFNR
        R++ +WS N SQGF  +S F  LLDPS T E V   +W++KV KKV+ FT Q  L+  R + V   +RR    WS N                       
Subjt:  RDIRLWSPNLSQGFIYRSFFHCLLDPSSTEESVCSLIWKVKVPKKVQSFTCQPKLNPRRRSSVPLKLRRAIEVWSQNQLRPTDAHPYCQVLHGRANTFNR

Query:  LSRNMPYLIGPFCCILCRMAKEDLDHILWHYDFASSVWNNFFER--LKFVRHRDFRKMIKEF
                    CCILCR AKEDLDH+LW   +A +VW +F +   ++    R  RK I+EF
Subjt:  LSRNMPYLIGPFCCILCRMAKEDLDHILWHYDFASSVWNNFFER--LKFVRHRDFRKMIKEF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAACCATTTTGTGGCTAACGTGTTGAACCCTTCTGAGAGCTCTCTTTCATATTCTTTTGGATTTTCTCAATCATTATCCCATAGGGAAACTATAGATATTTTGAC
TCTTCTATCTTTGATAAAGGAGGTCTCCTTTAAGCCGGATAGGAGGGATATTCGTTTGTGGAGCCCTAACCTGTCTCAAGGCTTTATCTATCGATCGTTCTTCCATTGCC
TCTTGGACCCTTCTTCTACTGAGGAGTCAGTCTGTTCTTTGATATGGAAGGTGAAAGTTCCAAAAAAGGTGCAGTCTTTTACCTGTCAGCCGAAACTCAACCCACGTCGC
CGCTCCTCCGTGCCGTTGAAGCTCCGTCGTGCCATTGAAGTTTGGAGCCAAAACCAACTTCGACCGACCGATGCTCACCCCTACTGTCAGGTTCTCCATGGAAGAGCCAA
TACCTTTAATCGACTTTCTAGAAATATGCCTTATTTGATAGGCCCATTCTGTTGTATTCTTTGTCGGATGGCGAAGGAAGACCTCGACCATATTTTGTGGCACTATGATT
TTGCTAGTTCAGTATGGAACAACTTCTTTGAGAGGCTTAAGTTTGTTAGACACAGGGATTTCAGGAAGATGATCAAGGAGTTCTTTCCCCATCTGCTTTTCGAGAACAGG
GGAACTTTTTGTGGTAGTCTAGGATTTATGCTATTATTTGGGCGTTTGGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAACCATTTTGTGGCTAACGTGTTGAACCCTTCTGAGAGCTCTCTTTCATATTCTTTTGGATTTTCTCAATCATTATCCCATAGGGAAACTATAGATATTTTGAC
TCTTCTATCTTTGATAAAGGAGGTCTCCTTTAAGCCGGATAGGAGGGATATTCGTTTGTGGAGCCCTAACCTGTCTCAAGGCTTTATCTATCGATCGTTCTTCCATTGCC
TCTTGGACCCTTCTTCTACTGAGGAGTCAGTCTGTTCTTTGATATGGAAGGTGAAAGTTCCAAAAAAGGTGCAGTCTTTTACCTGTCAGCCGAAACTCAACCCACGTCGC
CGCTCCTCCGTGCCGTTGAAGCTCCGTCGTGCCATTGAAGTTTGGAGCCAAAACCAACTTCGACCGACCGATGCTCACCCCTACTGTCAGGTTCTCCATGGAAGAGCCAA
TACCTTTAATCGACTTTCTAGAAATATGCCTTATTTGATAGGCCCATTCTGTTGTATTCTTTGTCGGATGGCGAAGGAAGACCTCGACCATATTTTGTGGCACTATGATT
TTGCTAGTTCAGTATGGAACAACTTCTTTGAGAGGCTTAAGTTTGTTAGACACAGGGATTTCAGGAAGATGATCAAGGAGTTCTTTCCCCATCTGCTTTTCGAGAACAGG
GGAACTTTTTGTGGTAGTCTAGGATTTATGCTATTATTTGGGCGTTTGGGGTGA
Protein sequenceShow/hide protein sequence
MKNHFVANVLNPSESSLSYSFGFSQSLSHRETIDILTLLSLIKEVSFKPDRRDIRLWSPNLSQGFIYRSFFHCLLDPSSTEESVCSLIWKVKVPKKVQSFTCQPKLNPRR
RSSVPLKLRRAIEVWSQNQLRPTDAHPYCQVLHGRANTFNRLSRNMPYLIGPFCCILCRMAKEDLDHILWHYDFASSVWNNFFERLKFVRHRDFRKMIKEFFPHLLFENR
GTFCGSLGFMLLFGRLG