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Spg012008 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg012008
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein of unknown function (DUF1218)
Genome locationscaffold1:3631408..3635539
RNA-Seq ExpressionSpg012008
SyntenySpg012008
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009606 - Modifying wall lignin-1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647674.1 hypothetical protein Csa_003691 [Cucumis sativus]1.5e-8286.93Show/hide
Query:  KTYGFVVCLLVIIMDVTAGILGLQAEIAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCICVRSAEEYKRLTSNKQLDVGSLVFAW
        KTYG VVC+L+II+DVTAGILG+QAEIAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILL LAHAIANLVGGCI VRSA++YK L++NKQL VGSL+FAW
Subjt:  KTYGFVVCLLVIIMDVTAGILGLQAEIAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCICVRSAEEYKRLTSNKQLDVGSLVFAW

Query:  ILLVVGFSFLISGAMYNTRSRKSCGLAHNHLLSIGGIVCFIHGLFVVAYYVSATAGLRDETKPPPQGNPAGATGHV
        I LVVGFS LISGAMYNTRSRKSCGLAHN LLSIGGIVCF+HGLF VAYYVS TAG R++TKPPPQGNPAGATGHV
Subjt:  ILLVVGFSFLISGAMYNTRSRKSCGLAHNHLLSIGGIVCFIHGLFVVAYYVSATAGLRDETKPPPQGNPAGATGHV

XP_004134744.2 uncharacterized protein LOC101214369 [Cucumis sativus]1.5e-8286.93Show/hide
Query:  KTYGFVVCLLVIIMDVTAGILGLQAEIAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCICVRSAEEYKRLTSNKQLDVGSLVFAW
        KTYG VVC+L+II+DVTAGILG+QAEIAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILL LAHAIANLVGGCI VRSA++YK L++NKQL VGSL+FAW
Subjt:  KTYGFVVCLLVIIMDVTAGILGLQAEIAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCICVRSAEEYKRLTSNKQLDVGSLVFAW

Query:  ILLVVGFSFLISGAMYNTRSRKSCGLAHNHLLSIGGIVCFIHGLFVVAYYVSATAGLRDETKPPPQGNPAGATGHV
        I LVVGFS LISGAMYNTRSRKSCGLAHN LLSIGGIVCF+HGLF VAYYVS TAG R++TKPPPQGNPAGATGHV
Subjt:  ILLVVGFSFLISGAMYNTRSRKSCGLAHNHLLSIGGIVCFIHGLFVVAYYVSATAGLRDETKPPPQGNPAGATGHV

XP_022142361.1 uncharacterized protein LOC111012499 [Momordica charantia]6.8e-8387.64Show/hide
Query:  KTYGFVVCLLVIIMDVTAGILGLQAEIAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCICVRSAEEYKRLTSNKQLDVGSLVFAW
        KTYG VVC+LVI+MDVTAGILG+QAEIAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANL GGC CVRSA+EYK LT+NKQ  V SLVFAW
Subjt:  KTYGFVVCLLVIIMDVTAGILGLQAEIAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCICVRSAEEYKRLTSNKQLDVGSLVFAW

Query:  ILLVVGFSFLISGAMYNTRSRKSCGLAHNHLLSIGGIVCFIHGLFVVAYYVSATAGLRDETKPPP--QGNPAGATGHV
        I L++GFS LISGAMYNTRSRKSCGLAHN LLSIGGIVCFIHGLFVVAYY++ATAGLR+ETKPPP  QGNPAGATGHV
Subjt:  ILLVVGFSFLISGAMYNTRSRKSCGLAHNHLLSIGGIVCFIHGLFVVAYYVSATAGLRDETKPPP--QGNPAGATGHV

XP_022950216.1 uncharacterized protein LOC111453374 [Cucurbita moschata]5.2e-8387.5Show/hide
Query:  KTYGFVVCLLVIIMDVTAGILGLQAEIAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCICVRSAEEYKRLTSNKQLDVGSLVFAW
        K  GFVVC+LVI+MDVTAGILG+QAE+AQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGC+ VRSA+EYK LTSNKQL  GSLVFAW
Subjt:  KTYGFVVCLLVIIMDVTAGILGLQAEIAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCICVRSAEEYKRLTSNKQLDVGSLVFAW

Query:  ILLVVGFSFLISGAMYNTRSRKSCGLAHNHLLSIGGIVCFIHGLFVVAYYVSATAGLRDETKPPPQGNPAGATGHV
        I +VVGFS LISGAMYNTRSRKSCGLAHNHLLSIGGI CF+HGLF VAYYVSATAG R+ET+PPPQG+PAGATGHV
Subjt:  ILLVVGFSFLISGAMYNTRSRKSCGLAHNHLLSIGGIVCFIHGLFVVAYYVSATAGLRDETKPPPQGNPAGATGHV

XP_022977369.1 uncharacterized protein LOC111477717 [Cucurbita maxima]2.0e-8287.5Show/hide
Query:  KTYGFVVCLLVIIMDVTAGILGLQAEIAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCICVRSAEEYKRLTSNKQLDVGSLVFAW
        K  GFVVC+LVI+MDVTAGILG+QAE+AQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGC+ VRSA+EYK LTSNKQL  GSLVFAW
Subjt:  KTYGFVVCLLVIIMDVTAGILGLQAEIAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCICVRSAEEYKRLTSNKQLDVGSLVFAW

Query:  ILLVVGFSFLISGAMYNTRSRKSCGLAHNHLLSIGGIVCFIHGLFVVAYYVSATAGLRDETKPPPQGNPAGATGHV
        I LVVGFS LISGAMYNTRSRKSCGLAH+HLLSIGGIVCF+HGLF VAYYVSATAG R+ T+PPPQG+PAGATGHV
Subjt:  ILLVVGFSFLISGAMYNTRSRKSCGLAHNHLLSIGGIVCFIHGLFVVAYYVSATAGLRDETKPPPQGNPAGATGHV

TrEMBL top hitse value%identityAlignment
A0A0A0KLA9 Uncharacterized protein7.3e-8386.93Show/hide
Query:  KTYGFVVCLLVIIMDVTAGILGLQAEIAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCICVRSAEEYKRLTSNKQLDVGSLVFAW
        KTYG VVC+L+II+DVTAGILG+QAEIAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILL LAHAIANLVGGCI VRSA++YK L++NKQL VGSL+FAW
Subjt:  KTYGFVVCLLVIIMDVTAGILGLQAEIAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCICVRSAEEYKRLTSNKQLDVGSLVFAW

Query:  ILLVVGFSFLISGAMYNTRSRKSCGLAHNHLLSIGGIVCFIHGLFVVAYYVSATAGLRDETKPPPQGNPAGATGHV
        I LVVGFS LISGAMYNTRSRKSCGLAHN LLSIGGIVCF+HGLF VAYYVS TAG R++TKPPPQGNPAGATGHV
Subjt:  ILLVVGFSFLISGAMYNTRSRKSCGLAHNHLLSIGGIVCFIHGLFVVAYYVSATAGLRDETKPPPQGNPAGATGHV

A0A5D3CMA3 Uncharacterized protein4.0e-8185.23Show/hide
Query:  KTYGFVVCLLVIIMDVTAGILGLQAEIAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCICVRSAEEYKRLTSNKQLDVGSLVFAW
        KTYG VVC+L+II+DVTAGILG+QAEIAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILL LAHAIANLVGGCI VRSA++YK L++NKQL  GSL+FAW
Subjt:  KTYGFVVCLLVIIMDVTAGILGLQAEIAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCICVRSAEEYKRLTSNKQLDVGSLVFAW

Query:  ILLVVGFSFLISGAMYNTRSRKSCGLAHNHLLSIGGIVCFIHGLFVVAYYVSATAGLRDETKPPPQGNPAGATGHV
        I L+VGFS LISGAMYNTRSRKSCGLAHN LLSIGGIVCF+HGLF VAYYVS TAG R++TKPPPQGNPA ATGHV
Subjt:  ILLVVGFSFLISGAMYNTRSRKSCGLAHNHLLSIGGIVCFIHGLFVVAYYVSATAGLRDETKPPPQGNPAGATGHV

A0A6J1CLY7 uncharacterized protein LOC1110124993.3e-8387.64Show/hide
Query:  KTYGFVVCLLVIIMDVTAGILGLQAEIAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCICVRSAEEYKRLTSNKQLDVGSLVFAW
        KTYG VVC+LVI+MDVTAGILG+QAEIAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANL GGC CVRSA+EYK LT+NKQ  V SLVFAW
Subjt:  KTYGFVVCLLVIIMDVTAGILGLQAEIAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCICVRSAEEYKRLTSNKQLDVGSLVFAW

Query:  ILLVVGFSFLISGAMYNTRSRKSCGLAHNHLLSIGGIVCFIHGLFVVAYYVSATAGLRDETKPPP--QGNPAGATGHV
        I L++GFS LISGAMYNTRSRKSCGLAHN LLSIGGIVCFIHGLFVVAYY++ATAGLR+ETKPPP  QGNPAGATGHV
Subjt:  ILLVVGFSFLISGAMYNTRSRKSCGLAHNHLLSIGGIVCFIHGLFVVAYYVSATAGLRDETKPPP--QGNPAGATGHV

A0A6J1GE80 uncharacterized protein LOC1114533742.5e-8387.5Show/hide
Query:  KTYGFVVCLLVIIMDVTAGILGLQAEIAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCICVRSAEEYKRLTSNKQLDVGSLVFAW
        K  GFVVC+LVI+MDVTAGILG+QAE+AQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGC+ VRSA+EYK LTSNKQL  GSLVFAW
Subjt:  KTYGFVVCLLVIIMDVTAGILGLQAEIAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCICVRSAEEYKRLTSNKQLDVGSLVFAW

Query:  ILLVVGFSFLISGAMYNTRSRKSCGLAHNHLLSIGGIVCFIHGLFVVAYYVSATAGLRDETKPPPQGNPAGATGHV
        I +VVGFS LISGAMYNTRSRKSCGLAHNHLLSIGGI CF+HGLF VAYYVSATAG R+ET+PPPQG+PAGATGHV
Subjt:  ILLVVGFSFLISGAMYNTRSRKSCGLAHNHLLSIGGIVCFIHGLFVVAYYVSATAGLRDETKPPPQGNPAGATGHV

A0A6J1IR67 uncharacterized protein LOC1114777179.5e-8387.5Show/hide
Query:  KTYGFVVCLLVIIMDVTAGILGLQAEIAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCICVRSAEEYKRLTSNKQLDVGSLVFAW
        K  GFVVC+LVI+MDVTAGILG+QAE+AQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGC+ VRSA+EYK LTSNKQL  GSLVFAW
Subjt:  KTYGFVVCLLVIIMDVTAGILGLQAEIAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCICVRSAEEYKRLTSNKQLDVGSLVFAW

Query:  ILLVVGFSFLISGAMYNTRSRKSCGLAHNHLLSIGGIVCFIHGLFVVAYYVSATAGLRDETKPPPQGNPAGATGHV
        I LVVGFS LISGAMYNTRSRKSCGLAH+HLLSIGGIVCF+HGLF VAYYVSATAG R+ T+PPPQG+PAGATGHV
Subjt:  ILLVVGFSFLISGAMYNTRSRKSCGLAHNHLLSIGGIVCFIHGLFVVAYYVSATAGLRDETKPPPQGNPAGATGHV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G05291.1 Protein of unknown function (DUF1218)6.0e-2137.5Show/hide
Query:  VVCLLVII-MDVTAGILGLQAEIAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCICVRSAEEYKRLTSNK---QLDVGSLVFAWI
        +VC+++ + +D+ AG +GLQA+ AQ  V H K+   ECK PS  AF LG+ A   L  AH  AN++ GC      +    L  NK     ++  L   W+
Subjt:  VVCLLVII-MDVTAGILGLQAEIAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCICVRSAEEYKRLTSNK---QLDVGSLVFAWI

Query:  LLVVGFSFLISGAMYNTRSRKSCGLAHNHLLSIGGIVCFIHGLFVVAYYVSA
        + + G   L +G   NT SR  C   +NH+ SIGG VCF+H +    YY+S+
Subjt:  LLVVGFSFLISGAMYNTRSRKSCGLAHNHLLSIGGIVCFIHGLFVVAYYVSA

AT1G11500.1 Protein of unknown function (DUF1218)2.9e-3141.38Show/hide
Query:  GFVVCLLVIIMDVTAGILGLQAEIAQNKVNHFKMWIFE------C-KDPSYNAFKLGLAAAILLGLAHAIANLVGGCICVRSAEEYKRLTSNKQLDVGSL
        GF+V +++I  D+TA +LG++AEIAQ+K  H             C + PS  AF  G+AA +LL + H +AN++GGC  +RS +++KR T+NK L V  L
Subjt:  GFVVCLLVIIMDVTAGILGLQAEIAQNKVNHFKMWIFE------C-KDPSYNAFKLGLAAAILLGLAHAIANLVGGCICVRSAEEYKRLTSNKQLDVGSL

Query:  VFAWILLVVGFSFLISGAMYNTRSRKSCGLAHNHLLSIGGIVCFIHGLFVVAYYVSATAGLRDETKPPPQGNPA
        V +WI  VV +S L+ G + N+R+ + C L H     IGGI C  HG+   AYYVSA A  +++ +   Q N A
Subjt:  VFAWILLVVGFSFLISGAMYNTRSRKSCGLAHNHLLSIGGIVCFIHGLFVVAYYVSATAGLRDETKPPPQGNPA

AT2G32280.1 Protein of unknown function (DUF1218)2.1e-5053.7Show/hide
Query:  KTYGFVVCLLVIIMDVTAGILGLQAEIAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCICVRSAEEYKRLTSNKQLDVGSLVFAW
        K  G +VCL+++ +DV A ILG+QAE+AQN+V H ++W+FEC++PS +AF+LGL AA +L +AH + NLVGGC+C+ S +E++R +S +Q+ +  LV  W
Subjt:  KTYGFVVCLLVIIMDVTAGILGLQAEIAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCICVRSAEEYKRLTSNKQLDVGSLVFAW

Query:  ILLVVGFSFLISGAMYNTRSRKSCGLAHNHLLSIGGIVCFIHGLFVVAYYVSATAGLRDETK
        I+  VGF  ++ G M N++SR SCG  H+H LSIGGI+CF+H LF VAYYVSATA  +DE K
Subjt:  ILLVVGFSFLISGAMYNTRSRKSCGLAHNHLLSIGGIVCFIHGLFVVAYYVSATAGLRDETK

AT4G21310.1 Protein of unknown function (DUF1218)9.5e-5962.11Show/hide
Query:  KTYGFVVCLLVIIMDVTAGILGLQAEIAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCICVRSAEEYKRLTSNKQLDVGSLVFAW
        +  GF +C+L++ MDV+AGILG++AEIAQNKV H KMWIFEC+DPSY AFK GLAA ILL LAH  AN +GGC+CV S ++ ++ ++NKQL V SL+F W
Subjt:  KTYGFVVCLLVIIMDVTAGILGLQAEIAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCICVRSAEEYKRLTSNKQLDVGSLVFAW

Query:  ILLVVGFSFLISGAMYNTRSRKSCGLAHNHLLSIGGIVCFIHGLFVVAYYVSATAGLRDET
        I+L + FS LI G M N+RSRK+CG++H+ +LSIGGI+CF+HGLF VAYY+SATA  R++T
Subjt:  ILLVVGFSFLISGAMYNTRSRKSCGLAHNHLLSIGGIVCFIHGLFVVAYYVSATAGLRDET


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCAGCAGCAGATGAGCACTTCCTTTGCTCGGCTTCATCCTCCACCAAACAGAATCTCACTCGTGCCGTTAAAACTTATGGTTTTGTCGTCTGCCTCTTGGTTATTATTAT
GGATGTTACAGCCGGAATACTTGGACTTCAGGCTGAAATAGCTCAAAACAAGGTGAATCATTTCAAAATGTGGATATTTGAGTGCAAAGACCCAAGCTATAATGCTTTCA
AGCTAGGCTTGGCTGCAGCCATACTGCTTGGCCTTGCTCACGCCATTGCCAACTTGGTTGGTGGATGCATTTGTGTTCGATCTGCTGAAGAATACAAAAGATTAACCTCT
AACAAGCAACTTGATGTGGGTTCACTCGTCTTTGCATGGATTTTGCTTGTGGTTGGATTCTCATTTCTTATCTCGGGGGCAATGTATAACACAAGGTCGAGAAAATCGTG
CGGGCTTGCTCACAATCATCTTCTGTCTATAGGGGGGATTGTGTGCTTCATACACGGCTTGTTTGTAGTCGCTTATTATGTATCTGCCACAGCAGGACTCAGGGATGAGA
CAAAGCCACCACCACAGGGGAACCCTGCCGGAGCTACAGGCCACGTTTAG
mRNA sequenceShow/hide mRNA sequence
GCAGCAGCAGATGAGCACTTCCTTTGCTCGGCTTCATCCTCCACCAAACAGAATCTCACTCGTGCCGTTAAAACTTATGGTTTTGTCGTCTGCCTCTTGGTTATTATTAT
GGATGTTACAGCCGGAATACTTGGACTTCAGGCTGAAATAGCTCAAAACAAGGTGAATCATTTCAAAATGTGGATATTTGAGTGCAAAGACCCAAGCTATAATGCTTTCA
AGCTAGGCTTGGCTGCAGCCATACTGCTTGGCCTTGCTCACGCCATTGCCAACTTGGTTGGTGGATGCATTTGTGTTCGATCTGCTGAAGAATACAAAAGATTAACCTCT
AACAAGCAACTTGATGTGGGTTCACTCGTCTTTGCATGGATTTTGCTTGTGGTTGGATTCTCATTTCTTATCTCGGGGGCAATGTATAACACAAGGTCGAGAAAATCGTG
CGGGCTTGCTCACAATCATCTTCTGTCTATAGGGGGGATTGTGTGCTTCATACACGGCTTGTTTGTAGTCGCTTATTATGTATCTGCCACAGCAGGACTCAGGGATGAGA
CAAAGCCACCACCACAGGGGAACCCTGCCGGAGCTACAGGCCACGTTTAG
Protein sequenceShow/hide protein sequence
AAADEHFLCSASSSTKQNLTRAVKTYGFVVCLLVIIMDVTAGILGLQAEIAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCICVRSAEEYKRLTS
NKQLDVGSLVFAWILLVVGFSFLISGAMYNTRSRKSCGLAHNHLLSIGGIVCFIHGLFVVAYYVSATAGLRDETKPPPQGNPAGATGHV